Thanks Luis, Sounds great! Could you send me a template? Thanks -Rich On Jan 14, 4:37 pm, Luis Mendoza <[email protected]> wrote: > Hi Rich, > Libra is able to support any number of channels and for any type of isobaric > labeling, including TMT. You can generate an appropriate Libra condition > file through Petunia (the TPP GUI), or we can send you a template that you > can edit and use in your analysis. > Cheers, > --Luis > > On Fri, Jan 14, 2011 at 4:33 PM, Eugene Kapp <[email protected]>wrote: > > > Hi Rich, > > > It depends on what mass spec instrument is generating the data - what > > instrument are you using? Just so you know MaxQuant has its own in-built > > search engine so has no dependency on Mascot anymore (but the latest > > software is undocumented -also not sure if it handles iTRAQ). Another option > > is ProteinPilot (contact ABI for a free trial - but this is commercial > > software at the end of the day$$$). > > > Eugene > > > ------------------------------ > > *From:* [email protected] on behalf of Rich > > *Sent:* Sat 15/01/2011 9:11 AM > > *To:* spctools-discuss > > *Subject:* [spctools-discuss] Itraq analysis > > > Hi everyone, Its been a while, I'm interested in analyzing some Itraq > > data. Has anyone successfully loaded it into labkey server? I will > > likely have 8 channels and it appears Libra may only support four > > channel reads. Does anyone know if Libra will support 8 channels? As > > an alternative to Itraq I was also considering Max Quant for Itraq > > analysis but it would require us to purchase a mascot license. From > > what I can tell you can not run data from other search engines into > > Max Quant. Does anyone have any recommendations on what software is > > best for Itraq data? Any suggestions folks have is appreciated. Thanks > > -Rich > > > -- > > You received this message because you are subscribed to the Google Groups > > "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > > [email protected]<spctools-discuss%[email protected]> > > . > > For more options, visit this group at > >http://groups.google.com/group/spctools-discuss?hl=en. > > > ------------------------------ > > This communication is intended only for the named recipient and may contain > > information that is confidential, legally privileged or subject to > > copyright; the Ludwig Institute for Cancer Research Ltd does not waive any > > rights if you have received this communication in error. > > The views expressed in this communication are those of the sender and do > > not necessarily reflect the views of the Ludwig Institute for Cancer > > Research Ltd. > > > -- > > You received this message because you are subscribed to the Google Groups > > "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > > [email protected]<spctools-discuss%[email protected]> > > . > > For more options, visit this group at > >http://groups.google.com/group/spctools-discuss?hl=en.
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