Hi, I am using msconvert to transform my .raw file acquired on a LTQ Velos into mzXML file. I performed LC-MS measurements in positive/negative mode in a single run, therefore my files contain both ion trace (i.e., positive and negative). I am trying to extract from my .raw file the negative ion trace and convert it in mzXML (filter="polarity negative"). When I am doing that, msconvert ignore my filter (it wrote back “Ignoring wrapper:…”) and transform my raw data into mzXML file which contains the negative and positive ion trace. Does anybody know how to extract each ion trace separately?
thanks a lot for your help, Cédric -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
