Hi LW, Yes I have used ascore with some success, although it is not integrated with TPP and crashes sometimes on longer peptides. We have a TPP integrated tool that is faster and as good or better than Ascore from some initial testing. The tool is available on commandline only at the moment and is not distributed with the installer yet. It is called PTMProphet and you can get an initial Windows only version of the test executable from this link: http://dl.dropbox.com/u/21286225/PTMProphetParser.exe
Hope that helps, -David On Mon, Oct 17, 2011 at 4:11 PM, LW <[email protected]> wrote: > Hi, > > I am wondering if anyone has use the ascore for > phospho site localization on XTandem/TPP processed data. > The software in Gygi lab seems to be based on sequest dta/out output. > > Thanks, > LW > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
