Brian, thanks! I was hoping the cluster would be useful to accelerate all the processes :-( I'll upload a mzML and see what happens, cheers
Alex On Tuesday, 19 February 2013 15:57:31 UTC-4, Brian Hampton wrote: > > Hi Alex, > > I can't help with the cluster issue per se. However, from the directory > structure it appears its running some version of Linux. It is my > understanding that the utilities that convert RAW files to mzML or mzXML > require a windows environment. You might consider using MSConvert on your > local machine to generate your mzML files and upload them as your starting > point in the pipeline. > > Many times error messages are only informative to the programmer. It > could be that its just failing to run the conversion program. Just my > guess. > > Cheers, > > Brian > > > On Tue, Feb 19, 2013 at 2:47 PM, Alex <[email protected] <javascript:>>wrote: > >> Hi there, >> >> I'm using ComputeCanada's TPP resource to run some of my data. I have run >> TPP on my desktop, but processing times have been an issues, so I decided >> to try ComputeCanadas TPP web interface version via WestGrids Bugaboo >> server. I've managed to upload my files, but when I start trying the mzML >> conversion of RAW files I get the following error: >> >> Error Found!NOCMDFILE: Cannot open /var/www/SSL/tpp/tmp/cmd_QF85GD8C7 >> for writing: No such file or directory >> >> Does anybody know what this means and how to continue from here??? If >> anybody has used this cluster before, can you send me your contact info?? I >> guess I need some tips to start moving on from this spot. >> >> Thanks! >> >> Alejandro >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to [email protected] <javascript:>. >> To post to this group, send email to >> [email protected]<javascript:> >> . >> Visit this group at http://groups.google.com/group/spctools-discuss?hl=en >> . >> For more options, visit https://groups.google.com/groups/opt_out. >> >> >> > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss?hl=en. For more options, visit https://groups.google.com/groups/opt_out.
