Hi Volkan, In Windows you will want to edit this file: C:\TPP\conf\httpd-tpp.conf .
Look for this line, and change the timeout to the desired number of seconds: Timeout *18000* Please note that you will need to *restart *the Apache webserver for any changes to take effect. You could also write batch files for Windows. As for Linux, which version did you try installing? We have a page with updated instructions at: http://tools.proteomecenter.org/wiki/index.php?title=TPP_ 5.1.0:_Installing_on_Ubuntu_16.04_LTS It is worth mentioning that the Linux version of the interface is not hampered by the webserver timeout. Cheers, --Luis On Fri, Feb 9, 2018 at 12:48 PM, Volkix <[email protected]> wrote: > Hi Luis, > > I also thought it is a webserver timeout issue. I tried to increase that > value but didn't work. May be I couldn't put correct things in the conf > file. Is there any conf file template to avaid server timeout issue. > > So I also couldn't install the server on the linux so it is on windows. I > think I will try to install tpp on linux without petunia and try to work > with batch scripts. > Thank you. > Volkan. > > 9 Şubat 2018 Cuma 15:29:52 UTC-5 tarihinde Luis yazdı: >> >> Hi Volkan, >> >> This may be a webserver timeout issue; how long do the searches run >> before they seem to stop? >> >> The easiest workaround is to simply run in batches of 5-10 files. >> Another option is to set the webserver timeout to a longer value. And yet >> another is to write a script that will do your searches in batch mode, >> especially if you expect to do this sort of high-volume search regularly. >> >> Are you running on Windows or Linux? >> >> --Luis >> >> >> >> On Fri, Feb 9, 2018 at 11:54 AM, Volkix <[email protected]> wrote: >> >>> Hi all, >>> >>> I have a couple hundreds of raw data to be analyzed. Using the petunia >>> UI, I convert the files into x(z)ml formats without any problems. when it >>> comes to X!tandem search analysis goes for 5-15(at most) files and then >>> stops. Petunia says there is a running job however windows task manager >>> shows no sign of X!tandem as a process. is this a known problem and/or is >>> there a workaround about this. >>> >>> Best >>> Volkan >>> >>> -- >>> You received this message because you are subscribed to the Google >>> Groups "spctools-discuss" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to [email protected]. >>> To post to this group, send email to [email protected]. >>> Visit this group at https://groups.google.com/group/spctools-discuss. >>> For more options, visit https://groups.google.com/d/optout. >>> >> >> -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To post to this group, send email to [email protected]. > Visit this group at https://groups.google.com/group/spctools-discuss. > For more options, visit https://groups.google.com/d/optout. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
