Am Mittwoch, 15. Januar 2020 13:23:17 UTC+1 schrieb Dima Pasechnik:
>
> On Wed, Jan 15, 2020 at 12:13 PM 'Martin R' via sage-release 
> <[email protected] <javascript:>> wrote: 
> > 
> > Oh dea, this is becoming strange: 
> > 
> > The output of configure says that 
> > 
> > atlas, openblas, iconv will NOT be installed, but 
> > 
> > bzip2-1.0.6-20150304.p0 
> > readline-6.3.008.p0 
> > xz-5.2.2.p0 
> > pcre-8.40.p2 
> > curl-7.62.0.p0 
> > 
> > However, I certainly have bzip2, xz, pcre and curl on my system, and I 
> guess also readline. 
> > 
> > Might there be a bug in configure? 
>
> You need development versions of these, see 
>
> https://doc.sagemath.org/html/en/installation/source.html#linux-recommended-installation
>  
>
> So, on Ubuntu: 
>
> libbz2-dev 
> libreadline-dev (seems to be missing in docs) 
> liblzma-dev (this is the xz lib, iirc) 
> libpcre3-dev 
> libcurl4-openssl-dev 

 

> the last of these, libcurl4-openssl-dev was indeed missing, but configure 
> still wants to build r :-(


Martin 

>
>
> > 
> > Martin 
> > 
> > Am Mittwoch, 15. Januar 2020 13:00:51 UTC+1 schrieb Dima Pasechnik: 
> >> 
> >> On Wed, Jan 15, 2020 at 11:35 AM 'Martin R' via sage-release 
> >> <[email protected]> wrote: 
> >> > 
> >> > Am Mittwoch, 15. Januar 2020 12:02:30 UTC+1 schrieb Dima Pasechnik: 
> >> >> 
> >> >> On Wed, Jan 15, 2020 at 10:37 AM 'Martin R' via sage-release 
> >> >> <[email protected]> wrote: 
> >> >> > 
> >> >> > Thanks again!  It still tries to build R and fails 
> >> >> > 
> >> >> > I checked that system R starts, it does (R version 3.4.4) 
> >> >> Please also make sure that 
> >> >> 
> >> >> pkg-config --modversion libR 
> >> >> 
> >> >> outputs the version. 
> >> >> 
> >> > Yes, it does. 
> >> > 
> >> >> 
> >> >> However there is just no "checking for R" message in your 
> config.log, 
> >> >> it indicates that there are still remains of R left 
> >> >> in your installation. 
> >> >> 
> >> >> I've opened https://trac.sagemath.org/ticket/29016 
> >> >> to deal with R being hard to clean away - feel free to try it. 
> >> >> 
> >> >> Maybe you also need to run 
> >> >> 
> >> >> make r-clean 
> >> > 
> >> > 
> >> > I did that, it says that there is no legacy uninstaller for r, and 
> that there is nothing to do.  I checked for the files in the ticket, but 
> none of them exists. :-( 
> >> > 
> >> > The config.log contains the lines 
> >> > 
> >> > configure:18950: checking installing any of atlas openblas iconv 
> readline bzip2 xz pcre curl? 
> >> > configure:18954: result: yes; install r as well 
> >> > 
> >> > but I do not know how to find out which of those (atlas openblas 
> iconv readline bzip2 xz pcre curl) is the problem. 
> >> 
> >> The easiest is to look at the output of ./configure 
> >> It should contain lines like 
> >> 
> >> atlas-3.10.2.p3 will not be installed (configure check) 
> >> 
> >> for each of the packages in that list. 
> >> So for any of these that are not marked this way, please install the 
> >> corresponding system package 
> >> and re-run configure. 
> >> 
> >> 
> >> 
> >> > 
> >> > Martin 
> >> > 
> >> > -- 
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>
> > 
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