For the record: ImportError: /usr/lib/x86_64-linux-gnu/libgsl.so.23: undefined symbol: cblas_ctrmv
Am Mittwoch, 15. Januar 2020 14:16:39 UTC+1 schrieb Martin R: > > I'm afraid I was celebrating too early. make build succeeded, but sage > doesn't start anymore now. I guess I should start from scratch. :-( > > Am Mittwoch, 15. Januar 2020 14:07:49 UTC+1 schrieb Martin R: >> >> BINGO!!! >> >> Many many many thanks! >> >> Martin >> >> Am Mittwoch, 15. Januar 2020 14:00:29 UTC+1 schrieb Dima Pasechnik: >>> >>> Note that you need to uninstall bzip2, xz, pcre, readline, curl before >>> the corresponding system >>> versions are picked up by ./configure (of course all this is not >>> needed for fresh builds...) >>> >>> if this does not help please post config.log >>> >>> On Wed, Jan 15, 2020 at 12:53 PM 'Martin R' via sage-release >>> <[email protected]> wrote: >>> > >>> > >>> > >>> > Am Mittwoch, 15. Januar 2020 13:23:17 UTC+1 schrieb Dima Pasechnik: >>> >> >>> >> On Wed, Jan 15, 2020 at 12:13 PM 'Martin R' via sage-release >>> >> <[email protected]> wrote: >>> >> > >>> >> > Oh dea, this is becoming strange: >>> >> > >>> >> > The output of configure says that >>> >> > >>> >> > atlas, openblas, iconv will NOT be installed, but >>> >> > >>> >> > bzip2-1.0.6-20150304.p0 >>> >> > readline-6.3.008.p0 >>> >> > xz-5.2.2.p0 >>> >> > pcre-8.40.p2 >>> >> > curl-7.62.0.p0 >>> >> > >>> >> > However, I certainly have bzip2, xz, pcre and curl on my system, >>> and I guess also readline. >>> >> > >>> >> > Might there be a bug in configure? >>> >> >>> >> You need development versions of these, see >>> >> >>> https://doc.sagemath.org/html/en/installation/source.html#linux-recommended-installation >>> >>> >> >>> >> So, on Ubuntu: >>> >> >>> >> libbz2-dev >>> >> libreadline-dev (seems to be missing in docs) >>> >> liblzma-dev (this is the xz lib, iirc) >>> >> libpcre3-dev >>> >> libcurl4-openssl-dev >>> > >>> > >>> >> >>> >> the last of these, libcurl4-openssl-dev was indeed missing, but >>> configure still wants to build r :-( >>> > >>> > >>> > Martin >>> >> >>> >> >>> >> >>> >> > >>> >> > Martin >>> >> > >>> >> > Am Mittwoch, 15. Januar 2020 13:00:51 UTC+1 schrieb Dima Pasechnik: >>> >> >> >>> >> >> On Wed, Jan 15, 2020 at 11:35 AM 'Martin R' via sage-release >>> >> >> <[email protected]> wrote: >>> >> >> > >>> >> >> > Am Mittwoch, 15. Januar 2020 12:02:30 UTC+1 schrieb Dima >>> Pasechnik: >>> >> >> >> >>> >> >> >> On Wed, Jan 15, 2020 at 10:37 AM 'Martin R' via sage-release >>> >> >> >> <[email protected]> wrote: >>> >> >> >> > >>> >> >> >> > Thanks again! It still tries to build R and fails >>> >> >> >> > >>> >> >> >> > I checked that system R starts, it does (R version 3.4.4) >>> >> >> >> Please also make sure that >>> >> >> >> >>> >> >> >> pkg-config --modversion libR >>> >> >> >> >>> >> >> >> outputs the version. >>> >> >> >> >>> >> >> > Yes, it does. >>> >> >> > >>> >> >> >> >>> >> >> >> However there is just no "checking for R" message in your >>> config.log, >>> >> >> >> it indicates that there are still remains of R left >>> >> >> >> in your installation. >>> >> >> >> >>> >> >> >> I've opened https://trac.sagemath.org/ticket/29016 >>> >> >> >> to deal with R being hard to clean away - feel free to try it. >>> >> >> >> >>> >> >> >> Maybe you also need to run >>> >> >> >> >>> >> >> >> make r-clean >>> >> >> > >>> >> >> > >>> >> >> > I did that, it says that there is no legacy uninstaller for r, >>> and that there is nothing to do. I checked for the files in the ticket, >>> but none of them exists. :-( >>> >> >> > >>> >> >> > The config.log contains the lines >>> >> >> > >>> >> >> > configure:18950: checking installing any of atlas openblas iconv >>> readline bzip2 xz pcre curl? >>> >> >> > configure:18954: result: yes; install r as well >>> >> >> > >>> >> >> > but I do not know how to find out which of those (atlas openblas >>> iconv readline bzip2 xz pcre curl) is the problem. >>> >> >> >>> >> >> The easiest is to look at the output of ./configure >>> >> >> It should contain lines like >>> >> >> >>> >> >> atlas-3.10.2.p3 will not be installed (configure check) >>> >> >> >>> >> >> for each of the packages in that list. >>> >> >> So for any of these that are not marked this way, please install >>> the >>> >> >> corresponding system package >>> >> >> and re-run configure. >>> >> >> >>> >> >> >>> >> >> >>> >> >> > >>> >> >> > Martin >>> >> >> > >>> >> >> > -- >>> >> >> > You received this message because you are subscribed to the >>> Google Groups "sage-release" group. >>> >> >> > To unsubscribe from this group and stop receiving emails from >>> it, send an email to [email protected]. >>> >> >> > To view this discussion on the web visit >>> https://groups.google.com/d/msgid/sage-release/5d105000-cea2-48a5-8840-aeb405a6cb71%40googlegroups.com. >>> >>> >>> >> > >>> >> > -- >>> >> > You received this message because you are subscribed to the Google >>> Groups "sage-release" group. >>> >> > To unsubscribe from this group and stop receiving emails from it, >>> send an email to [email protected]. >>> >> > To view this discussion on the web visit >>> https://groups.google.com/d/msgid/sage-release/ca07b5bd-8fe6-4383-ad3a-eab749b3760e%40googlegroups.com. >>> >>> >>> > >>> > -- >>> > You received this message because you are subscribed to the Google >>> Groups "sage-release" group. >>> > To unsubscribe from this group and stop receiving emails from it, send >>> an email to [email protected]. >>> > To view this discussion on the web visit >>> https://groups.google.com/d/msgid/sage-release/a2512246-f441-4ace-82df-fd1f354bcaf5%40googlegroups.com. >>> >>> >>> >> -- You received this message because you are subscribed to the Google Groups "sage-release" group. 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