probably you need to rebuild at least sagelib. ./sage -f sagelib
On Wed, Jan 15, 2020 at 1:18 PM 'Martin R' via sage-release <sage-release@googlegroups.com> wrote: > > For the record: > > ImportError: /usr/lib/x86_64-linux-gnu/libgsl.so.23: undefined symbol: > cblas_ctrmv > > > Am Mittwoch, 15. Januar 2020 14:16:39 UTC+1 schrieb Martin R: >> >> I'm afraid I was celebrating too early. make build succeeded, but sage >> doesn't start anymore now. I guess I should start from scratch. :-( >> >> Am Mittwoch, 15. Januar 2020 14:07:49 UTC+1 schrieb Martin R: >>> >>> BINGO!!! >>> >>> Many many many thanks! >>> >>> Martin >>> >>> Am Mittwoch, 15. Januar 2020 14:00:29 UTC+1 schrieb Dima Pasechnik: >>>> >>>> Note that you need to uninstall bzip2, xz, pcre, readline, curl before >>>> the corresponding system >>>> versions are picked up by ./configure (of course all this is not >>>> needed for fresh builds...) >>>> >>>> if this does not help please post config.log >>>> >>>> On Wed, Jan 15, 2020 at 12:53 PM 'Martin R' via sage-release >>>> <sage-r...@googlegroups.com> wrote: >>>> > >>>> > >>>> > >>>> > Am Mittwoch, 15. Januar 2020 13:23:17 UTC+1 schrieb Dima Pasechnik: >>>> >> >>>> >> On Wed, Jan 15, 2020 at 12:13 PM 'Martin R' via sage-release >>>> >> <sage-r...@googlegroups.com> wrote: >>>> >> > >>>> >> > Oh dea, this is becoming strange: >>>> >> > >>>> >> > The output of configure says that >>>> >> > >>>> >> > atlas, openblas, iconv will NOT be installed, but >>>> >> > >>>> >> > bzip2-1.0.6-20150304.p0 >>>> >> > readline-6.3.008.p0 >>>> >> > xz-5.2.2.p0 >>>> >> > pcre-8.40.p2 >>>> >> > curl-7.62.0.p0 >>>> >> > >>>> >> > However, I certainly have bzip2, xz, pcre and curl on my system, and >>>> >> > I guess also readline. >>>> >> > >>>> >> > Might there be a bug in configure? >>>> >> >>>> >> You need development versions of these, see >>>> >> https://doc.sagemath.org/html/en/installation/source.html#linux-recommended-installation >>>> >> >>>> >> So, on Ubuntu: >>>> >> >>>> >> libbz2-dev >>>> >> libreadline-dev (seems to be missing in docs) >>>> >> liblzma-dev (this is the xz lib, iirc) >>>> >> libpcre3-dev >>>> >> libcurl4-openssl-dev >>>> > >>>> > >>>> >> >>>> >> the last of these, libcurl4-openssl-dev was indeed missing, but >>>> >> configure still wants to build r :-( >>>> > >>>> > >>>> > Martin >>>> >> >>>> >> >>>> >> >>>> >> > >>>> >> > Martin >>>> >> > >>>> >> > Am Mittwoch, 15. Januar 2020 13:00:51 UTC+1 schrieb Dima Pasechnik: >>>> >> >> >>>> >> >> On Wed, Jan 15, 2020 at 11:35 AM 'Martin R' via sage-release >>>> >> >> <sage-r...@googlegroups.com> wrote: >>>> >> >> > >>>> >> >> > Am Mittwoch, 15. Januar 2020 12:02:30 UTC+1 schrieb Dima Pasechnik: >>>> >> >> >> >>>> >> >> >> On Wed, Jan 15, 2020 at 10:37 AM 'Martin R' via sage-release >>>> >> >> >> <sage-r...@googlegroups.com> wrote: >>>> >> >> >> > >>>> >> >> >> > Thanks again! It still tries to build R and fails >>>> >> >> >> > >>>> >> >> >> > I checked that system R starts, it does (R version 3.4.4) >>>> >> >> >> Please also make sure that >>>> >> >> >> >>>> >> >> >> pkg-config --modversion libR >>>> >> >> >> >>>> >> >> >> outputs the version. >>>> >> >> >> >>>> >> >> > Yes, it does. >>>> >> >> > >>>> >> >> >> >>>> >> >> >> However there is just no "checking for R" message in your >>>> >> >> >> config.log, >>>> >> >> >> it indicates that there are still remains of R left >>>> >> >> >> in your installation. >>>> >> >> >> >>>> >> >> >> I've opened https://trac.sagemath.org/ticket/29016 >>>> >> >> >> to deal with R being hard to clean away - feel free to try it. >>>> >> >> >> >>>> >> >> >> Maybe you also need to run >>>> >> >> >> >>>> >> >> >> make r-clean >>>> >> >> > >>>> >> >> > >>>> >> >> > I did that, it says that there is no legacy uninstaller for r, and >>>> >> >> > that there is nothing to do. I checked for the files in the >>>> >> >> > ticket, but none of them exists. :-( >>>> >> >> > >>>> >> >> > The config.log contains the lines >>>> >> >> > >>>> >> >> > configure:18950: checking installing any of atlas openblas iconv >>>> >> >> > readline bzip2 xz pcre curl? >>>> >> >> > configure:18954: result: yes; install r as well >>>> >> >> > >>>> >> >> > but I do not know how to find out which of those (atlas openblas >>>> >> >> > iconv readline bzip2 xz pcre curl) is the problem. >>>> >> >> >>>> >> >> The easiest is to look at the output of ./configure >>>> >> >> It should contain lines like >>>> >> >> >>>> >> >> atlas-3.10.2.p3 will not be installed (configure check) >>>> >> >> >>>> >> >> for each of the packages in that list. >>>> >> >> So for any of these that are not marked this way, please install the >>>> >> >> corresponding system package >>>> >> >> and re-run configure. >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> > >>>> >> >> > Martin >>>> >> >> > >>>> >> >> > -- >>>> >> >> > You received this message because you are subscribed to the Google >>>> >> >> > Groups "sage-release" group. >>>> >> >> > To unsubscribe from this group and stop receiving emails from it, >>>> >> >> > send an email to sage-r...@googlegroups.com. >>>> >> >> > To view this discussion on the web visit >>>> >> >> > https://groups.google.com/d/msgid/sage-release/5d105000-cea2-48a5-8840-aeb405a6cb71%40googlegroups.com. >>>> >> > >>>> >> > -- >>>> >> > You received this message because you are subscribed to the Google >>>> >> > Groups "sage-release" group. >>>> >> > To unsubscribe from this group and stop receiving emails from it, >>>> >> > send an email to sage-r...@googlegroups.com. >>>> >> > To view this discussion on the web visit >>>> >> > https://groups.google.com/d/msgid/sage-release/ca07b5bd-8fe6-4383-ad3a-eab749b3760e%40googlegroups.com. >>>> > >>>> > -- >>>> > You received this message because you are subscribed to the Google >>>> > Groups "sage-release" group. >>>> > To unsubscribe from this group and stop receiving emails from it, send >>>> > an email to sage-r...@googlegroups.com. >>>> > To view this discussion on the web visit >>>> > https://groups.google.com/d/msgid/sage-release/a2512246-f441-4ace-82df-fd1f354bcaf5%40googlegroups.com. > > -- > You received this message because you are subscribed to the Google Groups > "sage-release" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to sage-release+unsubscr...@googlegroups.com. > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-release/1901644c-892d-4151-8b52-4845029e8753%40googlegroups.com. -- You received this message because you are subscribed to the Google Groups "sage-release" group. 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