Re: Taverna Language Command Line tool - convert command doc

:32, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, I am very happy to help, and I understand the command structure is a little fluid right now. Thank you for the blog post; it was very helpful. I am a little confused about your recursive example. Can you help me understand what

Re: Taverna Language Command Line tool - convert command doc

documentations. On 20 June 2015 at 03:43, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, Thanks for updating your blog! I have some additional feedback in the form of two blog posts. One has a detailed description (as I understand it) of the convert command and one has several

RE: Taverna Language Command Line tool - convert command doc

info. https://github.com/apache/incubator-taverna-language/tree/master/taverna-robundle cheers. On 20 June 2015 at 22:43, Gale Naylor ga...@noventussolutions.com wrote: Thank you for the Wordpress tip, Menaka! I have changed the two blog posts to use the pre tag, and it looks great. I also made

Re: Taverna Language Command Line tool - convert command doc

Hi Menaka, I am very happy to help, and I understand the command structure is a little fluid right now. Thank you for the blog post; it was very helpful. I am a little confused about your recursive example. Can you help me understand what you mean when you say the files will get saved to the C

Re: Taverna Language Command Line tool - convert command doc

. Also in recursive conversion, there could be other files also. In new_features2, I removed it because I have entered the wrong logic. I restored it. Thank you Menaka On 27 June 2015 at 01:54, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, A couple more things. I am trying

Re: Taverna Language Command Line tool - convert command doc

clarification about the blogs please ask me. :) Thank you very much Gale. Menaka On 27 June 2015 at 00:00, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, I've been reading and learning more about research objects, and I think I understand better what is going on, but I still have some

Re: Taverna Language Command Line tool - convert command doc

-api)? I found this doc in http://dev.mygrid.org.uk/wiki/display/developer/SCUFL2+API Cheers Menaka On 27 June 2015 at 22:46, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, According to the documentations provided, SCUFL is an experimental module. So It has not added

Re: Taverna Language Command Line tool - convert command doc

you think you would consider contributing it to Apache so we can include it on our website? On 27 June 2015 at 18:16, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, According to the documentations provided, SCUFL is an experimental module. So It has not added to the tool yet

Re: Taverna Language Command Line tool - convert command doc

documentation more successfully with the support that you have given me Thank you very much for the effort, time and every thing that you spent for me. Have a very nice vacation. :-) Cheers Menaka Madushanka On 1 July 2015 at 07:25, Gale Naylor ga...@noventussolutions.com wrote

Re: Taverna Language Command Line tool - convert command doc

complete documentation for the command line tool. I'll appreciate your support for it. :-) Cheers. Menaka On 29 June 2015 at 22:10, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, I found this doc in http://dev.mygrid.org.uk/wiki/display/developer/SCUFL2+API Thanks

Re: Taverna Language Command Line tool - convert command doc

. For the best, I have some much better doc from you. :-) :-) Thank you very much. Menaka On 30 June 2015 at 20:09, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, Sounds great! Do you plan to use your blog to prepare the documentation? Feel free to use anything I've prepared

Re: [GitHub] incubator-taverna-language pull request: Readme

Hi Menaka, I've reviewed your readme file and I have a question and some minor suggestions: Is there a reason you have two Contribute sections? Would it be possible to combine these? (Also, your second Contribute section is at the same level as your title; I'm not sure you want that.) Specific

Re: [jira] [Created] (TAVERNA-843) Link to Apache's Jira on Taverna Website(s)

the changes. Cheers, Ian On 28/07/2015 01:39, Gale Naylor wrote: I will take a shot at this, unless someone else has already started. Gale On Mon, Jul 13, 2015 at 6:07 AM, Stian Soiland-Reyes (JIRA) j...@apache.org wrote: Stian Soiland-Reyes created TAVERNA-843

Re: Taverna Language Command Line tool - convert command doc

clarification about the blogs please ask me. :) Thank you very much Gale. Menaka On 27 June 2015 at 00:00, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, I've been reading and learning more about research objects, and I think I understand better what is going on, but I still have some

Re: Taverna Language Command Line tool - convert command doc

I would do it, but I need clarification as to what exactly you are looking for. Gale On Tue, Jul 28, 2015 at 12:25 PM, Gale Naylor ga...@noventussolutions.com wrote: Hi Stian, Does it make sense to turn this into a JIRA issue? Gale On Thu, Jul 2, 2015 at 7:51 AM, Stian Soiland-Reyes st

Re: [GitHub] incubator-taverna-language pull request: Readme

You are very welcome, Menaka! Glad I could help. Gale On Aug 5, 2015 9:53 AM, Menaka Madushanka menaka12...@gmail.com wrote: Hi Gale, That was very impressive. I did the modifications you mentioned. I greatly appreciate the support you gave me throughout the project. I was able to

Re: [GitHub] incubator-taverna-language pull request: Readme

review it and give me some feedback. I used the content from my blogs which were reviewed by you. :-) So the structure is almost same. Thank you very much Menaka On 31 July 2015 at 02:12, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, I've reviewed your readme file and I have

Re: Draft: Taverna Language download page

it to Below? On 10 August 2015 at 15:01, Gale Naylor ga...@noventussolutions.com wrote: Hi Stain, Is there supposed to be a link in the sentence (under Source Code) where it says, Here you can find all Taverna Language source releases.? Thanks, Gale -Original Message- From: Stian

Re: Draft: Taverna Language download page

the 0.15.0-incubating headline right below.. so I'll change it to Below? On 10 August 2015 at 15:01, Gale Naylor ga...@noventussolutions.com wrote: Hi Stain, Is there supposed to be a link in the sentence (under Source Code) where it says, Here you can find all Taverna Language source releases

RE: Draft: Taverna Language download page

Hi Stain, Is there supposed to be a link in the sentence (under Source Code) where it says, Here you can find all Taverna Language source releases.? Thanks, Gale -Original Message- From: Stian Soiland-Reyes [mailto:st...@apache.org] Sent: Monday, August 10, 2015 6:44 AM To:

Re: [GitHub] incubator-taverna-language pull request: Readme

that this report contains more explanation? If so, you could say, This report is more explanatory. Line 361: Misspelled resources. I know a lot of these are picky, but it will make your readme file stand out in a good way! Nice job. Gale On Mon, Aug 3, 2015 at 11:27 AM, Gale Naylor ga

Re: [jira] [Created] (TAVERNA-843) Link to Apache's Jira on Taverna Website(s)

I will take a shot at this, unless someone else has already started. Gale On Mon, Jul 13, 2015 at 6:07 AM, Stian Soiland-Reyes (JIRA) j...@apache.org wrote: Stian Soiland-Reyes created TAVERNA-843: --- Summary: Link to Apache's Jira on

Re: Taverna Language Command Line tool - convert command doc

etc are needed). Cheers, Ian On 21/07/2015 15:04, Gale Naylor wrote: Hi Stian, I have submitted a pull request regarding adding the Taverna Language Modules diagram. This is my first time, so I'm not sure if I did it correctly or if there is anything else I need to do now. Thank you

Re: Taverna Language Command Line tool - convert command doc

. :) Thank you very much Gale. Menaka On 27 June 2015 at 00:00, Gale Naylor ga...@noventussolutions.com wrote: Hi Menaka, I've been reading and learning more about research objects, and I think I understand better what is going on, but I still have some questions. 1) I am curious as to which

RE: Taverna Language Command Line tool - convert command doc

, Hi Gale. I can see the pull request here https://github.com/apache/incubator-taverna-site/pull/1 Thanks very much :) We'll have a look and get it merged soon (or feedback in case any changes etc are needed). Cheers, Ian On 21/07/2015 15:04, Gale Naylor wrote: Hi Stian, I have submitted

Re: Taverna Language Command Line tool - convert command doc

- http://www.apache.org/licenses/#clas - before we can accept larger contributions. On 3 July 2015 at 05:29, Gale Naylor ga...@noventussolutions.com wrote: Hi Stian, Yes, when I get home from vacation (July 10-11), I will look at this information more carefully and have a go at adding

Re: Trouble setting up SSH

d an ssh key and I haven't seemed to need one so > far. At least I can't see one listed in my account details at > id.apache.org. I have added my PGP public fingerprint. > > Cheers, > > Ian > > On 08/12/15 09:04, Andy Seaborne wrote: > > On 08/12/15 00:49, Gale Naylor wrote

First commit

I was able to add myself to the committer list at http://incubator.apache.org/projects/taverna.html, but my name shows up at the end of the list, instead of where I added it. I looked online, but have yet to find anything to explain this, or how to fix it. Thanks, Gale

Re: First commit

first (at the top > left). This tells SVN to update your 'local' (ie your apache account) > copy of the repository. It's usually a good idea to update before > doing any changes to a page. > > Cheers, > > Ian > > On 14/12/15 19:12, Gale Naylor wrote: > > Hmm. https://svn

Fwd: Taverna Site :- Documentation menu

averna Site :- Documentation menu To: Gale Naylor <ga...@noventussolutions.com>, Andy Seaborne < a...@apache.org>, Alan Williams <alanin...@googlemail.com>, Stian Soiland-Reyes <st...@apache.org> Hi everybody, When I looked at the Taverna site, I spotted this menu item.

Re: Apache Taverna site

problem is please. >> >> Cheers, >> >> Ian >> >> On 10/12/2015 15:17, Gale Naylor wrote: >> > I cannot see the image. >> > >> > On Thu, Dec 10, 2015 at 4:00 AM Menaka Madushanka < >> menaka12...@gmail.com> >> > wr

Re: Fwd: Taverna Site :- Documentation menu

D MESSAGE- > Hash: SHA256 > > Hello, > > I think it is in the /trunk/templates/ directory. There seems to be 2 > navbars - default_navbar.html and navbar.html, not sure why. Try > changing navbar.html and see if that works. > > Cheers, > > Ian > > On 17/12/2015 03

Re: Apache Taverna site

I cannot see the image. On Thu, Dec 10, 2015 at 4:00 AM Menaka Madushanka wrote: > Hi everybody, > > When I looked at the Taverna site, I spotted this. > > > ​ > *command-line is not as the others.* > > I don't know is this ok but I thought it should be corrected. > >

Re: First commit

make a commit. Gale On Fri, Dec 11, 2015 at 10:01 AM Andy Seaborne <a...@apache.org> wrote: > On 11/12/15 16:39, Gale Naylor wrote: > > I was able to add myself to the committer list at > > http://incubator.apache.org/projects/taverna.html, but my name shows up > at

Re: Common workflow language

Creating JIRA issues makes sense to me. Unless we have another way to keep track of proposed or potential actions. Gale On Fri, Dec 11, 2015 at 6:02 AM Ian Dunlop wrote: > Hello, > > I know this is a crazy suggestion, but..are there some issues that > we can

Re: Trouble setting up SSH

is maybe: > There's some kind of "export to OpenSSL" according to > > > http://serverfault.com/questions/194567/how-do-i-tell-git-for-windows-where-to-find-my-private-rsa-key > > Andy > > On 09/12/15 04:01, Gale Naylor wrote: > > @Andy -

Edit of Scufl2-Workflow Bundle

I reviewed the entire Scufl2-Workflow Bundle page (bundle.md) and made some edits for clarity, consistency, grammar, and I also fixed some typos. I'm not sure what to do about double-braces: - one is in Bundle Path and Root Files: {{application/rdf+xml}). I'm guessing the right parenthesis is

Re: Edit of Scufl2-Workflow Bundle

workflowBundle.rdf`. > Also {{application/rdf+xml}) should be `application/rdf+xml`. > I think it is because it was copied from the old website which used > {{}} for formatting whereas in markdown (md) it uses backticks `` > > Cheers, > > Ian > > On 06/01/2016 23:07, Gale N

Re: [jira] [Created] (TAVERNA-882) Publications page

On Mon, Jan 11, 2016 at 1:48 PM Gale Naylor <ga...@noventussolutions.com> wrote: > What about this paper from October 2014? Would you want to include this on > a publications page? > > Title: BIFI: a Taverna plugin for a simplified and user-friendly workflow > platform

Re: [jira] [Created] (TAVERNA-882) Publications page

I looked at the links to the Google scholar searches above and mostly found oblique references to Apache Taverna, along the lines of what Alan mentioned. The only one that looked promising to me was this one: Local Graph Patterns for Scientific Workflow Similarity Search

Re: [jira] [Created] (TAVERNA-882) Publications page

applies to all Abstracts.) DOI: 10.1186/s12859-015-0714-x On Mon, Jan 11, 2016 at 12:42 PM Gale Naylor <ga...@noventussolutions.com> wrote: > I looked at the links to the Google scholar searches above and mostly > found oblique references to Apache Taverna, along the lines

Re: [DISCUSS] Release candidate 2 of Command-line Tool 3.1.0-incubating

s: [INFO] [WARNING] org.apache.commons.logging;version="[1.1.1,2.0.0)" [INFO] [WARNING] Bundle : org.springframework:org.springframework.transaction:jar:3.0.5.RELEASE has unresolved package dependencies: [INFO] [WARNING] org.apache.commons.logging;version="[1.1.1,2.0.0)" [INFO]

Re: Taverna Mobile Application

Hi Rajan, The dev@taverna mailing list is intended to collect all development work, including things like your suggested fixes to the Taverna Mobile App! Can you please include your suggestions in an email to the dev list? (A reply to this email would make sense.) Thanks! Gale On Thu, Jun 2,

Re: [DISCUSS] The third RC of Taverna Command Line 3.1.0

Fingers crossed for RC3! I will be out of town for a couple of days, but will review and build when I return. On Mon, Jun 6, 2016, 7:31 AM Stian Soiland-Reyes wrote: > This is the discussion thread for Command Line 3.1.0 RC3. > > You can place your votes in the corresponding

Re: Code Analysis Tools Implementation

You should be all set, Sagar! On Thu, Jun 9, 2016 at 10:01 AM Sagar <kumarsagar15...@gmail.com> wrote: > Hi Gale, > > I sign-up here : https://cwiki.apache.org/confluence/signup.action > > my username : sagar15795 > > Thanks. > Sagar > > On Thu, Jun

Re: Code Analysis Tools Implementation

I created a GSOC 2016 Apache Taverna Mobile parent page. You can add wiki page(s) as child pages. Let me know if you have any problems. Gale On Thu, Jun 9, 2016 at 10:27 AM Gale Naylor <ga...@noventussolutions.com> wrote: > You should be all set, Sagar! > > On Thu, Jun 9, 2016 at

Added Structure to Confluence Wiki Pages

I organized the wiki pages so that all the GSOC-related pages are under a parent page called GSOC 2016, which serves as a table of contents. I also added a parent page called Releases, which has all the release-related pages, and acts as a table of contents. Does this seem reasonable? Gale

Re: [DISCUSS] Release candidate 2 of Command-line Tool 3.1.0-incubating

Yes, I think we can do the package.html file headers after the release. On Mon, Jun 6, 2016 at 7:27 AM Stian Soiland-Reyes <st...@apache.org> wrote: > On 4 June 2016 at 17:30, Gale Naylor <ga...@noventussolutions.com> wrote: > > Thanks for the explanations, Stian. A vo

Re: [DISCUSS] The third RC of Taverna Command Line 3.1.0

taverna-engine, taverna-common-activities, and taverna-commandline all build successfully on my Windows 10 machine running Maven 3.3.9 and Java 1.8.0_91. I do not have time to perform a detailed check of the source headers for the common-activities or commandline files at this time, or check the

Re: Code Analysis Tools Implementation

Hi Rajan, You should be able to add a wiki now. Please let me know if you have any difficulties. Thanks, Gale On Thu, Jun 9, 2016 at 4:08 AM Rajan Maurya wrote: > Hi, > > I sign-up here : https://cwiki.apache.org/confluence/signup.action > > my username :

Re: Code Analysis Tools Implementation

If you only need one page, go ahead and use this one: https://cwiki.apache.org/confluence/display/TAVERNADEV/GSOC+2016+Apache+Taverna+Mobile If you need multiple pages, go ahead and create them - we can always sort out the organization later. On Thu, Jun 9, 2016 at 10:54 AM Gale Naylor <

Re: Taverna Mobile Application

ractice. >I suggest making a util/ConnectionInfo something class to use anywhere >you need to check internet connection. >6. > >What about if the loading data failed from the internet. Implement >showResponseError. > > > Thanks > > > > >

Re: [DISCUSS] The third RC of Taverna Command Line 3.1.0

I do not think any of the issues I raised should stop the release. I agree to adding the non-Javadoc warnings individually to JIRA. There are a lot of Javadoc warnings, can we have one JIRA issue for each component that collects all of the Javadoc warnings? I'm ready to [VOTE]. On Mon, Jun 13,

Re: [] Release Apache Taverna Command-line Tool 3.1.0-incubating RC3

+1 taverna-engine, taverna-common-activities, and taverna-commandline all build successfully on my Windows 10 machine running Maven 3.3.9 and Java 1.8.0_91. Add the following warnings to JIRA: --- Warnings (other than Javadoc warnings) - Individual JIRA

Direct-editing by Committers

I was going to add the license headers to the 2 taverna-engine README files (taverna-prov/reADME.md and taverna-reference-types/reADME.md), but I wasn't sure of the procedure for editing directly. I found the link, but wasn't sure how to edit without effecting what someone else is doing. Do you

Re: Podling Report Reminder - June 2016

Looks good! The only comment I have is that the mailing list stats are in chronological order and the user stats are in reverse chronological order. It may be easier to read if they are both the same, unless there is a reason why they are reported this way. Thank you! You answered the question I

Re: Starting command line 3.1.0 release process

What about the 2nd taverna-engine build failure? Has that been resolved? http://apache-taverna-dev.markmail.org/message/olyip2p5rioghodm?q=+from:%22Gale+Naylor%22=1 On Thu, May 26, 2016, 9:08 AM Stian Soiland-Reyes wrote: > OK, so now that the US export thingie has been sent

Re: Possible changes to groupId, etc?

Excellent! Thanks, Stian. I am working on the Web pages. On Thu, May 26, 2016, 9:15 AM Stian Soiland-Reyes wrote: > Done: > > > https://github.com/apache/incubator-taverna-commandline/commit/b096abbe15ee90dbd5f9c28bb56a3ed64f6b91e6 > > [INFO] Apache Taverna Command-line Tool

Re: Release of Taverna Command Line?

I also got several JavaDoc warnings. I'll try to slog through them and add them to JIRA in the next week or so. Gale On Fri, May 27, 2016 at 8:42 AM Gale Naylor <ga...@noventussolutions.com> wrote: > Thanks for the links, Alan! > > I'm happy to say the entire engine pro

Re: Release of Taverna Command Line?

wmodel-impl:bundle:3.1.0-incubating-SNAPSHOT : Export org.apache.taverna.workflowmodel.impl, has 1, private references [org.apache.taverna.workflowmodel.processor.dispatch.impl], On Fri, May 27, 2016 at 8:20 AM Alan Williams <alanin...@googlemail.com> wrote: > On 27-May-16 16:06, Gale Naylor

Re: [VOTE] Release Apache Taverna Command-line Tool 3.1.0-incubating RC2

taverna.t2.workflowmodel.health.HealthChecker Well. That was mind-numbing. Whew! Glad I'm done with that part. Gale On Thu, Jun 2, 2016 at 9:30 AM Alan Williams <alanin...@googlemail.com> wrote: > On 02-Jun-16 17:01, Gale Naylor wrote: > > Hello, > > > > I am findi

Re: [VOTE] Release Apache Taverna Command-line Tool 3.1.0-incubating RC2

There is no #3. I just forgot to adjust the numbers. On Thu, Jun 2, 2016 at 10:56 AM Gale Naylor <ga...@noventussolutions.com> wrote: > I finished reviewing all the file headers. Here is what I found: > > --- > Non-ASF Copyrights >

Re: [VOTE] Release Apache Taverna Command-line Tool 3.1.0-incubating RC2

the java files in /src/main/java/org/apache/taverna/provenance/lineageservice/types/ Gale On Wed, Jun 1, 2016 at 6:16 PM Gale Naylor <ga...@noventussolutions.com> wrote: > Starting the review process... > > -- &g

Re: [DISCUSS] Release candidate 2 of Command-line Tool 3.1.0-incubating

I'm so sorry - I've been replying to the VOTE thread. I'll copy my comments here: -- UP-FRONT CHECKS -- The MD5 checksums in the [VOTE] email are the same as the SHA1 checksums. I'm using the downloaded MD5 and

Edited Command-line Tool Web Pages

Hello, all. I edited the Command-line Tool web pages (to fix the tool name, etc.) and they are staged in the CMS. Please review: (A) Download page: http://taverna.staging.apache.org/download/commandline/ (B) Documentation page: http://taverna.staging.apache.org/documentation/command-line/ I

Re: [VOTE] Release Apache Taverna Command-line Tool 3.1.0-incubating RC2

Starting the review process... -- UP-FRONT CHECKS -- The MD5 checksums in the [VOTE] email are the same as the SHA1 checksums. I'm using the downloaded MD5 and SHA-1. (Question) I'm curious what r13865 means:

Re: Starting command line 3.1.0 release process

Thanks for taking care of all this. I like the wiki page. On Mon, May 30, 2016, 4:40 PM Stian Soiland-Reyes wrote: > On 27 May 2016 at 10:05, Stian Soiland-Reyes wrote: > > No, I see that compile problem was not fixed.. sorry. I'll have a go > > in Windows

Re: Checkstyle/Findbugs LGPL - does it matter

If they are not part of the distribution, where are they? Are they in the repositories? On Wed, Jun 15, 2016 at 11:04 AM Donal Fellows < donal.k.fell...@manchester.ac.uk> wrote: > The plugins should be fine. They are not required to build anything (if > anyone is super-worried, they can be put

Re: Redirection from taverna.org.uk

Hi Stian, I'm curious about redirecting the top level pages. If each page has the Deprecated banner, isn't that good enough? What am I missing? Gale On Mon, Jan 11, 2016 at 8:41 AM alaninmcr wrote: > Hello > > Can we have a Google hangout about this? I think it is

Re: Redirection from taverna.org.uk

I would like to join. I am available Wednesday 16-18 GMT and Friday 15-16 GMT. On Fri, Jan 15, 2016 at 8:05 AM Stian Soiland-Reyes wrote: > I'll delay changing www.taverna.org.uk pending the outcome of that > hangout. > > On 15 January 2016 at 16:04, Stian Soiland-Reyes

Re: Proposed google hangout

+1 for Friday 15:00 GMT and for the agenda. On Mon, Jan 18, 2016 at 8:25 AM Stian Soiland-Reyes wrote: > Both are good for myself, but +1 for Friday 15:00 GMT. > > On 18 January 2016 at 15:44, Ian Dunlop > wrote: > > Hello, > > > > So we have 2

Re: Functionality in next release?

ub.com/taverna/ !) > > > > These plugins *ARE* included in the 3.1.0 release: > > Beanshell scripts > External Tool > Interaction service > REST service > Spreadsheet > XML splitters > WSDL services > XPath > > (Which Alan is looking at workflows to

Re: TAVERNA-867 doclint javadoc and Java 7 (was: Snapshot issue when releasing taverna language)

I'm looking at the readme files for Java 7 references. I found several in taverna-databundle/readme.md, but they are not simple find-and-replace. For example, "This API is built on the Java 7 NIO Files and the RO Bundle API, which uses the Java 7 ZIP file provider to generate the Data Bundle."

Re: TAVERNA-867 doclint javadoc and Java 7 (was: Snapshot issue when releasing taverna language)

(3) JAVA 7 "Java 1.7 or newer" -- change to "Java 1.8" ? *** Commands: inspect SECTION *** (4) BROKEN LINK Broken "http://ns.taverna.org.uk/2010/activity/constant; link (Service types used in helloworld.wfbundle) On Tue, Feb 2

Re: Snapshot issue when releasing taverna language

I created a couple of pull requests to make minor changes to the tavlang readme file and to CommandLineTool.java. In the Java file, line 197 says "List of files to be converted.\n " I'm not sure what the ".\n" means. Is this correct? The rest of the descriptions all look good to me. @stain, I

Re: TAVERNA-867 doclint javadoc and Java 7 (was: Snapshot issue when releasing taverna language)

*** (13) BROKEN LINK Broken "org.apache.taverna.robundle.TestExample" link to https://github.com/apache/incubator-taverna-language/blob/master/taverna-robundle/src/test/java/org/purl/wf4ever/robundle/TestExample.java (14) JAVA 7 Code sample includes Java 7 style (&quo

Review readme for taverna-language-commandline

(Ref TAVERNA-867) Here is what I noticed in the taverna-language-commandline readme file: *** INTRODUCTORY PARAGRAPHS *** (1) "planned" and "work in progress" should change to reflect code is complete? (Already mentioned in "functionality in next release"

Re: Snapshot issue when releasing taverna language

rk too well with a > shaded JAR though (modifying -classpath). > > On 1 February 2016 at 18:31, Gale Naylor <ga...@noventussolutions.com> > wrote: > > I created a couple of pull requests to make minor changes to the tavlang > > readme file and to CommandLineTool.java.

Re: TAVERNA-867 doclint javadoc and Java 7 (was: Snapshot issue when releasing taverna language)

deprecating it. But still the taverna-scufl2-ucfpackage is > used by taverna-wfbundle (which should use robundle instead) - so it's > needed as an internal dependency. > > > > On 2 February 2016 at 18:43, Gale Naylor <ga...@noventussolutions.com> > wrote: > > taverna-robund

Re: TAVERNA-867 doclint javadoc and Java 7 (was: Snapshot issue when releasing taverna language)

SAMPLE CONTAINS JAVA 7 REFERENCE // Or Java 7 style Path localFile = Files.createTempFile("", ".txt"); Files.copy(in1, localFile, StandardCopyOption.REPLACE_EXISTING); System.out.println("Written to: " + localFile); On Wed, Feb 3, 2016 at 11:0

Re: TAVERNA-867 doclint javadoc and Java 7 (was: Snapshot issue when releasing taverna language)

; https://github.com/apache/incubator-taverna-language/blob/master/taverna-scufl2-wfdesc/src/test/resources/valid_component_imagemagickconvert.wfdesc.ttl On Wed, Feb 3, 2016 at 10:53 AM Gale Naylor <ga...@noventussolutions.com> wrote: > Broken/old links and questions in tave

Re: TAVERNA-867 doclint javadoc and Java 7 (was: Snapshot issue when releasing taverna language)

Or change tavtool to tavlang (link) tool, to be consistent with other instances On Wed, Feb 3, 2016 at 10:21 AM Gale Naylor <ga...@noventussolutions.com> wrote: > Questions and broken links in taverna-scufl2-api/readme.md. > > > INTRO

Re: [DISCUSS] Release Candidate 5 of taverna-language-0.15.1 and taverna-osgi-0.2.1

FYI: The sha512sum got cut off for taverna-maven-parent. On Sat, Feb 27, 2016 at 4:03 PM Dmitry wrote: > Master. > > Going to try RC5. > > Dmitry > > On 2/28/2016 12:56 AM, Stian Soiland-Reyes wrote: > > Thanks! Do you mean the tag 0.15.1-incubating-RC5 (0.15.1-incubating) > >

Re: [DISCUSS] Release Candidate 5 of taverna-language-0.15.1 and taverna-osgi-0.2.1

Thank you very much for the details, Andy. I'm doing my best to come up to speed on all this. A question: In looking at the LICENSE files, and the Apache documentation ( http://www.apache.org/legal/src-headers.html#notice), I'm wondering about the Taverna Language License, which contains several

Re: [DISCUSS] Release Candidate 5 of taverna-language-0.15.1 and taverna-osgi-0.2.1

un, Feb 28, 2016 at 2:54 PM Gale Naylor <ga...@noventussolutions.com> wrote: > Thank you very much for the details, Andy. I'm doing my best to come up to > speed on all this. > > A question: > In looking at the LICENSE files, and the Apache documentation ( > http://www.apache

Re: [DISCUSS] Release Candidate 5 of taverna-language-0.15.1 and taverna-osgi-0.2.1

as the Open-document (robundle) OASIS license/notification. Thanks, Gale On Sun, Feb 28, 2016 at 3:02 PM Gale Naylor <ga...@noventussolutions.com> wrote: > RE: LICENSES > Now I've come across this set of statements: "These third party notices > vary from license to license. Apach

Re: [CANCELLED] [VOTE] Release taverna-language-0.15.1-incubating-RC4 and taverna-osgi-0.2.1-incubating-RC4

I hope I'll be up-to-speed in time to participate in the next release! On Wed, Feb 24, 2016, 11:15 PM Stian Soiland-Reyes wrote: > Thanks to all who tested this release candidate and provided feedback in > the DISCUSS thread?! > > I'm sorry to be CANCELLING this vote, as

Re: Draft March 2016 incubator report for Taverna

Looks good to me. On Mon, Feb 29, 2016 at 4:07 AM Stian Soiland-Reyes wrote: > Thanks, Ian! > > I've added them (and my draft) to > https://wiki.apache.org/incubator/March2016 > > > I don't think we need to comment on the copyright review thread, that > is just part of normal

Re: [DISCUSS] Release Candidate 5 of taverna-language-0.15.1 and taverna-osgi-0.2.1

e legally OK against OASIS, and we are still an > incubating project with DISCLAIMER, this policy breach should not be a > blocker for this release - but it would have to be sorted before the > first proper ASF release of Taverna Language. > > Other views? Mentors? > > On 29 Fe

Trying to understand the big picture

Hi, all. I'm trying to map the release items ( http://taverna.incubator.apache.org/download/code/ - Source code repositories section) with the overall architecture of Taverna 3 so I can understand the big picture. I'm using the diagram from Stian's 2014-10-31 presentation (

Re: schema.org metadata

So I can see how you chose to tag it. On Fri, Jan 22, 2016 at 3:55 PM Gale Naylor <ga...@noventussolutions.com> wrote: > @Stian, when you get a chance, could you give me an example of a webpage > you have already tagged with the schema.org metadata so I can see what it > looks l

Re: Trying to understand the big picture

fits together. > > Cheers, > > Ian > > On 22/01/2016 20:57, Gale Naylor wrote: > > Hi, all. I'm trying to map the release items ( > > http://taverna.incubator.apache.org/download/code/ - Source code > > repositories section) with the overall architecture of Tavern

Re: Proposed google hangout

logies!) > > Cheers, > > Ian > > On 20/01/2016 15:29, Gale Naylor wrote: > > It looks like that link will work for me. If not, I also have the Hangout > > app on my phone. But since this is my first time, maybe monitoring the > IRC > > channel (at least, a

Re: Proposed google hangout

uess we will use google hangout. > >> What is the best way to set this up. Do we use a "hangout on air" so > >> that we can broadcast it? @Stian - can you remember what you did for the > >> last taverna hangout? > >> Anyway, details to follow so

Re: [jira] [Commented] (TAVERNA-882) Publications page

Will do. I'm working on it, and gathering online links to doi, etc where I can. I also like the style you described. Should be done before Friday. On Tue, Jan 19, 2016, 6:59 AM Stian Soiland-Reyes (JIRA) wrote: > > [ >

Re: Proposed google hangout

@Ian - never mind! On Fri, Jan 22, 2016 at 8:12 AM Gale Naylor <ga...@noventussolutions.com> wrote: > @Ian, do you typically > copy the IRC "minutes" to the email list? > > Thanks, > Gale > > On Fri, Jan 22, 2016 at 7:10 AM Ian Dunlop <ian.dun.

Re: Proposed google hangout

t; > Cheers, > > Ian > > On 22/01/2016 15:01, Gale Naylor wrote: > > I'm rebooting. Will try in a sec. > > > > On Fri, Jan 22, 2016, 6:55 AM Ian Dunlop <ian.dun...@manchester.ac.uk> > > wrote: > > > >> Hello, > >> >

Re: Proposed google hangout

I'm rebooting. Will try in a sec. On Fri, Jan 22, 2016, 6:55 AM Ian Dunlop wrote: > Hello, > > try this hangout on air > > https://plus.google.com/events/cg8d6fl9786orgjb8ms7tvddo80 > > Cheers, > > Ian > > On 22/01/2016 14:45, alaninmcr wrote: > > On 20/01/2016

Re: Proposed google hangout

one with the link" I need to > invite specifically. > > On 22 January 2016 at 15:01, Gale Naylor <ga...@noventussolutions.com> > wrote: > > I'm rebooting. Will try in a sec. > > > > On Fri, Jan 22, 2016, 6:55 AM Ian Dunlop <ian.dun...@manchester.ac.

schema.org metadata

@Stian, when you get a chance, could you give me an example of a webpage you have already tagged with the schema.org metadata so I can see what it looks like? Thanks, Gale

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