Hi Brian

Building is no longer essential for me, but I gave it a try anyways.
the fann libraries are sorted out, but the gsl project is a mess of
missing/moved header files. Does trunk build for anyone right now?



On Oct 12, 10:36 am, Brian Pratt <[email protected]> wrote:
> Try building from trunk.
>
> That fann stuff came in to the build fairly recently and was probably
> pushed into the branch without the accompanying changes to the MSVC
> build files.
>
> - Brian
>
> On Tue, Oct 12, 2010 at 7:02 AM, Jeffrey Milloy
>
>
>
> <[email protected]> wrote:
> > Thanks for the quick reply Natalie. I am looking into msconvert to
> > replace readw. Does msconvert check if the RAW file is "in aquisition"
> > before generating the mzXML?
>
> > First, when I try to build msconvert, I have the same problem. Maybe I
> > should have titled my thread "Buliding tpplib" because that is where
> > fann.h is required! A search for fann on the web gives a fast
> > artificial neural network library - is this really what I need? Why am
> > I unable to build tpplib out of the box, as others do?
>
> > Secondly, I am currently interested the rawfile libraries in order to
> > write some very short/simple code of my own. I am using readw as
> > example code with working rawfile libs. In particular, I want to grab
> > the comment and other header information in the RAW file in order to
> > populate our in-house database. Is msconvert a more appropriate
> > example to build from?
>
> > On Oct 11, 6:14 pm, Natalie Tasman <[email protected]>
> > wrote:
> >> As one of the main developers on ReAdW, I'd suggest switching to the
> >> much more current msconvert program, part of the ProteoWizard project
> >> and included in the TPP (though likely a newer version is available
> >> directly from pwiz).  ReAW does not have a lot of attention on it,
> >> versus the very-well maintained pwiz project.  If there's no
> >> compelling reason to specifically use ReAdW, I'd switch.  If there is,
> >> please let the pwiz team know so the functionality can be added to
> >> msconvert.
>
> >> -Natalie
>
> >> On Mon, Oct 11, 2010 at 2:24 PM, Jeffrey Milloy
>
> >> <[email protected]> wrote:
> >> > I'm trying to build ReAdW under winxp.
>
> >> > After no success with Visual Studio 2010 Professional, I am using
> >> > Visual Studio 2005 Professional.
>
> >> > I checked out tags/release_4-4-0/trans_proteomic_pipeline, and tried
> >> > to build the ReAdW project under the Debug configuration. Everything
> >> > went well until tpplib, where it could not find fann.h:
>
> >> > 6>C:\sashimi\trans_proteomic_pipeline\src\Parsers/Algorithm2XML/
> >> > RTCalculator.h(29) : fatal error C1083: Cannot open include file:
> >> > 'fann.h': No such file or directory
>
> >> > Any ideas?
>
> >> > Jeff
>
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