xplor-nih  

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• • [Xplor-nih] Can't install Xplor-nih on Darwin_8_x86_64 [email protected]
• [Xplor-nih] About dgsa and how to include CSA in calculation. Si Yan
  • [Xplor-nih] About dgsa and how to include CSA in calculation. [email protected]
• [Xplor-nih] energy minimization of side chains Yi Zhang
  • [Xplor-nih] energy minimization of side chains [email protected]
• [Xplor-nih] To compute the RMSD of the calculated structure and x-ray structure Si Yan
  • [Xplor-nih] To compute the RMSD of the calculated structure and x-ray structure [email protected]
• [Xplor-nih] dock_tor_rigid mods David A. Horita
  • [Xplor-nih] dock_tor_rigid mods [email protected]
  • [Xplor-nih] RAMA inter-residue Jakob Toudahl Nielsen
  • [Xplor-nih] RAMA inter-residue Bermejo, Guillermo (NIH/CIT) [E]
• [Xplor-nih] Ensemble Calculation with MTSL labels‏ Yi Zhang
  • [Xplor-nih] Ensemble Calculation with MTSL labels‏ [email protected]
• [Xplor-nih] addAtoms.py David A. Horita
  • [Xplor-nih] addAtoms.py [email protected]
  • [Xplor-nih] addAtoms.py Mueller, Geoffrey (NIH/NIEHS) [E]
• [Xplor-nih] cis-peptide [email protected]
  • [Xplor-nih] cis-peptide [email protected]
• [Xplor-nih] Shape term Robert Brynmor Fenwick
  • [Xplor-nih] Shape term [email protected]
  • [Xplor-nih] Shape term Robert Brynmor Fenwick
  • [Xplor-nih] Shape term [email protected]
• [Xplor-nih] Installing the latest version of vmd-Xplor for Mac Anna Kuznetsova
  • [Xplor-nih] Installing the latest version of vmd-Xplor for Mac [email protected]
• [Xplor-nih] Hydrogen name mismatch [email protected]
• [Xplor-nih] Atom Order and Rigid Body Docking Andrew Butterworth
  • [Xplor-nih] Atom Order and Rigid Body Docking [email protected]
• [Xplor-nih] Calculation with 'newrefine.py' Yi Zhang
  • [Xplor-nih] Calculation with 'newrefine.py' [email protected]
  • [Xplor-nih] Calculation with 'newrefine.py' [email protected]
  • [Xplor-nih] Calculation with 'newrefine.py' [email protected]
• [Xplor-nih] Structure calculation with multiple MTSL side chains Yi Zhang
  • [Xplor-nih] Structure calculation with multiple MTSL side chains [email protected]
• [Xplor-nih] xplor-nih installation on Mac OS 10.6.4 Nathan Wright
  • [Xplor-nih] xplor-nih installation on Mac OS 10.6.4 [email protected]
• [Xplor-nih] PASD strucure generation killed pavel macek
  • [Xplor-nih] PASD strucure generation killed [email protected]
• [Xplor-nih] Fwd: changing segment names gary thompson
  • [Xplor-nih] Fwd: changing segment names [email protected]
• [Xplor-nih] Temperature and GB computing time increase Olivier Serve
  • [Xplor-nih] Temperature and GB computing time increase Olivier Serve
  • [Xplor-nih] Temperature and GB computing time increase [email protected]
• [Xplor-nih] IVM hinges S.P. Skinner
  • [Xplor-nih] IVM hinges [email protected]
  • [Xplor-nih] rigid body optimization of oligomer Jakob Toudahl Nielsen
  • [Xplor-nih] rigid body optimization of oligomer [email protected]
• [Xplor-nih] Nucleic acid ensemble refinement DeRose, Eugene (NIH/NIEHS) [C]
  • [Xplor-nih] Nucleic acid ensemble refinement [email protected]
• [Xplor-nih] Check out my photos on Facebook Anupam Banerjee
• [Xplor-nih] FW: RDC Hussan, Syed (NIH/NIDDK) [F]
  • [Xplor-nih] FW: RDC [email protected]
• [Xplor-nih] "class" specification in "sani" Thomas Pochapsky
  • [Xplor-nih] "class" specification in "sani" [email protected]
  • [Xplor-nih] "class" specification in "sani" Thomas Pochapsky
  • [Xplor-nih] "class" specification in "sani" [email protected]
• [Xplor-nih] DNA ensemble calculation DeRose, Eugene (NIH/NIEHS) [C]
  • [Xplor-nih] DNA ensemble calculation [email protected]
  • [Xplor-nih] DNA ensemble calculation DeRose, Eugene (NIH/NIEHS) [C]
  • [Xplor-nih] DNA ensemble calculation [email protected]
  • [Xplor-nih] DNA ensemble calculation DeRose, Eugene (NIH/NIEHS) [C]
  • [Xplor-nih] DNA ensemble calculation [email protected]
  • [Xplor-nih] DNA ensemble calculation DeRose, Eugene (NIH/NIEHS) [C]
  • [Xplor-nih] DNA ensemble calculation [email protected]
• [Xplor-nih] Latest Version ? Jay Vyas
  • [Xplor-nih] Latest Version ? [email protected]
• [Xplor-nih] xplor-nih for Sun computers Christina Redfield
  • [Xplor-nih] xplor-nih for Sun computers [email protected]
• [Xplor-nih] Isopeptide patch olivier serve
  • [Xplor-nih] Isopeptide patch [email protected]
  • [Xplor-nih] Isopeptide patch olivier serve
  • [Xplor-nih] Isopeptide patch [email protected]
  • [Xplor-nih] Isopeptide patch olivier serve
  • [Xplor-nih] Isopeptide patch [email protected]
  • [Xplor-nih] PyPot base class Jakob Toudahl Nielsen
  • [Xplor-nih] PyPot base class [email protected]
• [Xplor-nih] Problem with writing pdbs using Python annealing script David Yadin
  • [Xplor-nih] Problem with writing pdbs using Python annealing script [email protected]
• [Xplor-nih] simulated annealing with explicit electrostatics Thomas Pochapsky
  • [Xplor-nih] simulated annealing with explicit electrostatics [email protected]
  • [Xplor-nih] simulated annealing with explicit electrostatics Jack Skalicky
  • [Xplor-nih] simulated annealing with explicit electrostatics [email protected]
• [Xplor-nih] Issue with GB potential Olivier Serve
  • [Xplor-nih] Issue with GB potential [email protected]
• [Xplor-nih] About previous implicit solvent question Olivier Serve
• [Xplor-nih] Implicit solvent Olivier Serve
• [Xplor-nih] Problem implementing DELPHIC DNA potential DeRose, Eugene (NIH/NIEHS) [C]
  • [Xplor-nih] Problem implementing DELPHIC DNA potential [email protected]
• [Xplor-nih] Need NMR refinement structure programme anupam bandyopadhyay
  • [Xplor-nih] Need NMR refinement structure programme [email protected]
• [Xplor-nih] angles and bonds in nucleic.par Maria Pechlaner
  • [Xplor-nih] angles and bonds in nucleic.par [email protected]
  • [Xplor-nih] angles and bonds in nucleic.par Maria Pechlaner
  • [Xplor-nih] angles and bonds in nucleic.par [email protected]
• [Xplor-nih] "removing bond" message during refinement with Zn Mikaela Stewart
  • [Xplor-nih] "removing bond" message during refinement with Zn [email protected]
• [Xplor-nih] conjugate_2.pdb input file from PRE_DISTRIBUTE Business
  • [Xplor-nih] conjugate_2.pdb input file from PRE_DISTRIBUTE [email protected]
• [Xplor-nih] setPotType("soft") for noes David A. Horita
  • [Xplor-nih] setPotType("soft") for noes [email protected]
• [Xplor-nih] Refinement with Zn atoms Mikaela Stewart
  • [Xplor-nih] Refinement with Zn atoms [email protected]
• [Xplor-nih] refine.py dihedral angles input file Mikaela Stewart
  • [Xplor-nih] refine.py dihedral angles input file [email protected]
• [Xplor-nih] Period Box Usman Rasul
  • [Xplor-nih] Period Box [email protected]
• [Xplor-nih] Is there a script that converts Sparky .list assignment names to XPLOR format for RDCs? Mikaela Stewart
  • [Xplor-nih] Is there a script that converts Sparky .list assignment names to XPLOR format for RDCs? [email protected]
• [Xplor-nih] Calculating VDW energies for proteins with multiple mtsl probes Rob Clubb
  • [Xplor-nih] Calculating VDW energies for proteins with multiple mtsl probes [email protected]
• [Xplor-nih] input tbl files [email protected]
  • [Xplor-nih] input tbl files Jurgen F. Doreleijers
• [Xplor-nih] xplor-nih-2.25 on cluster Muskett, Fred W. (Dr.)
  • [Xplor-nih] xplor-nih-2.25 on cluster [email protected]
• [Xplor-nih] Xplor-nih Digest, Vol 85, Issue 1 Krish Krishnan
  • [Xplor-nih] Xplor-nih Digest, Vol 85, Issue 1 [email protected]
• [Xplor-nih] SAXS data Krish Krishnan
  • [Xplor-nih] SAXS data [email protected]
  • [Xplor-nih] SAXS data [email protected]
• [Xplor-nih] pdbLoad function Krish Krishnan
  • [Xplor-nih] pdbLoad function [email protected]
• [Xplor-nih] Problems writing structures; followup on http://www.mail-archive.com/[email protected]/msg00927.html R.M. van der Werf
  • [Xplor-nih] Problems writing structures; followup on http://www.mail-archive.com/[email protected]/msg00927.html [email protected]
• [Xplor-nih] cyclic peptide [email protected]
  • [Xplor-nih] cyclic peptide [email protected]
  • [Xplor-nih] cyclic peptide [email protected]
  • [Xplor-nih] cyclic peptide [email protected]
  • [Xplor-nih] cyclic peptide [email protected]
• [Xplor-nih] Problems writing output structures R.M. van der Werf
  • [Xplor-nih] Problems writing output structures [email protected]
• [Xplor-nih] Xplor-nih Digest, Vol 84, Issue 4 R.M. van der Werf
• [Xplor-nih] Problems with eginput DNA structure calculations DeRose, Eugene (NIH/NIEHS) [C]
  • [Xplor-nih] Problems with eginput DNA structure calculations [email protected]
  • [Xplor-nih] Problems with eginput DNA structure calculations [email protected]
  • [Xplor-nih] Problems with eginput DNA structure calculations [email protected]
  • [Xplor-nih] Problems with eginput DNA structure calculations DeRose, Eugene (NIH/NIEHS) [C]
  • [Xplor-nih] Problems with eginput DNA structure calculations [email protected]
• [Xplor-nih] snow leopard Sanaz Dovell
  • [Xplor-nih] snow leopard [email protected]
  • [Xplor-nih] snow leopard [email protected]
• [Xplor-nih] Multiple kinds of RDCs udaya kiran
  • [Xplor-nih] Multiple kinds of RDCs [email protected]
• [Xplor-nih] NOE energy [email protected]
• [Xplor-nih] psf and pdb for octyl b-glucoside Thomas Pochapsky
  • [Xplor-nih] psf and pdb for octyl b-glucoside [email protected]
• [Xplor-nih] problems running xplor-nih on a Mac Chunyu Wang
  • [Xplor-nih] problems running xplor-nih on a Mac [email protected]
  • [Xplor-nih] problems running xplor-nih on a Mac [email protected]
  • [Xplor-nih] problems running xplor-nih on a Mac [email protected]
  • [Xplor-nih] problems running xplor-nih on a Mac [email protected]
• [Xplor-nih] question about nih-xplor on NMR Wiki Q&A forum [email protected]
• [Xplor-nih] Structure display during simulated annealing Vitaly Vostrikov
  • [Xplor-nih] Structure display during simulated annealing [email protected]
  • [Xplor-nih] Structure display during simulated annealing Vitaly Vostrikov
  • [Xplor-nih] Structure display during simulated annealing [email protected]
  • [Xplor-nih] Structure display during simulated annealing Vitaly Vostrikov
• [Xplor-nih] RMSD matrix using pairRMSD.py yun lin
  • [Xplor-nih] RMSD matrix using pairRMSD.py [email protected]
• [Xplor-nih] Membrane protein structure calculation in presence of an SDS micelle Franz Hagn
  • [Xplor-nih] Membrane protein structure calculation in presence of an SDS micelle [email protected]
  • [Xplor-nih] Membrane protein structure calculation in presence of an SDS micelle Franz Hagn
  • [Xplor-nih] Membrane protein structure calculation in presence of an SDS micelle [email protected]
• [Xplor-nih] Analysis the result of ensemble calculation yun lin
  • [Xplor-nih] Analysis the result of ensemble calculation [email protected]
• [Xplor-nih] NOE [email protected]
• [Xplor-nih] Question about using Generalized Born implicit water model yun lin
  • [Xplor-nih] Question about using Generalized Born implicit water model [email protected]
• [Xplor-nih] Annealing and refinement Misbah Ghafoor
  • [Xplor-nih] Annealing and refinement [email protected]
  • [Xplor-nih] Annealing and refinement [email protected]
• [Xplor-nih] Questions about ensemble-based calculation yun lin
  • [Xplor-nih] Questions about ensemble-based calculation [email protected]
  • [Xplor-nih] Questions about ensemble-based calculation [email protected]
• [Xplor-nih] generating psf of oligomer Myunggi Yi
  • [Xplor-nih] generating psf of oligomer [email protected]
• [Xplor-nih] Non Crystallographic Symmetry potential in python. [email protected]
  • [Xplor-nih] About Merging Two scripts [email protected]
• [Xplor-nih] DELPHIC potential, with torsion_raw databases Jie-rong Huang
  • [Xplor-nih] DELPHIC potential, with torsion_raw databases [email protected]
  • [Xplor-nih] DELPHIC potential, with torsion_raw databases Jie-rong Huang
  • [Xplor-nih] DELPHIC potential, with torsion_raw databases [email protected]
• [Xplor-nih] Using minimizeRefine Valerie A. Villareal
  • [Xplor-nih] Using minimizeRefine [email protected]
  • [Xplor-nih] Using minimizeRefine Valerie A. Villareal
  • [Xplor-nih] Using minimizeRefine [email protected]
• [Xplor-nih] small structure refinement [email protected]
• [Xplor-nih] Carbon chemical shift potential Xiaogang Niu
  • [Xplor-nih] Carbon chemical shift potential [email protected]
  • [Xplor-nih] Carbon chemical shift potential Xiaogang Niu
  • [Xplor-nih] Carbon chemical shift potential [email protected]
• [Xplor-nih] Xplor-nih post from [email protected] requires approval [email protected]
  • [Xplor-nih] Xplor-nih post from [email protected] requires approval John Kuszewski
• [Xplor-nih] Fwd: InitMatch3dC.tcl empty list/error opening 3dc_pass1.shiftAssignments Chris Warner
• [Xplor-nih] FW: Welcome to the "Xplor-nih" mailing list cuijie
• [Xplor-nih] make nmr ensemble Xiaogang Niu
  • [Xplor-nih] make nmr ensemble [email protected]
  • [Xplor-nih] Delphic torsions and residue affinity potential Jakob Toudahl Nielsen
  • [Xplor-nih] Delphic torsions and residue affinity potential [email protected]
• [Xplor-nih] Rép : RDC for relative domains orientation Olivier Serve
  • [Xplor-nih] Rép : RDC for relative domains orientation [email protected]
• [Xplor-nih] Minor population for PRE calculations Valerie A. Villareal

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