denovoassembler-users  

Messages by Date

• 2012/03/16 Re: [Denovoassembler-users] PE and SE reads Sébastien Boisvert
• 2012/03/14 Re: [Denovoassembler-users] ray hanged? Sébastien Boisvert
• 2012/03/13 Re: [Denovoassembler-users] Ray produced the same scaffolds and contigs Sébastien Boisvert
• 2012/03/13 Re: [Denovoassembler-users] Ray produced the same scaffolds and contigs Sébastien Boisvert
• 2012/03/12 Re: [Denovoassembler-users] RayPlatform: error on compiling Sébastien Boisvert
• 2012/03/07 Re: [Denovoassembler-users] Ray produced the same scaffolds and contigs Sébastien Boisvert
• 2012/03/07 Re: [Denovoassembler-users] read count Louis Letourneau
• 2012/03/07 Re: [Denovoassembler-users] read count Sébastien Boisvert
• 2012/03/07 [Denovoassembler-users] read count Louis Letourneau
• 2012/03/06 Re: [Denovoassembler-users] Base miscalls? Sébastien Boisvert
• 2012/03/06 Re: [Denovoassembler-users] Ray produced the same scaffolds and contigs Sébastien Boisvert
• 2012/03/06 Re: [Denovoassembler-users] Base miscalls? Sébastien Boisvert
• 2012/03/05 Re: [Denovoassembler-users] Ray produced the same scaffolds and contigs Sébastien Boisvert
• 2012/03/05 Re: [Denovoassembler-users] Ray produced the same scaffolds and contigs Sébastien Boisvert
• 2012/03/01 [Denovoassembler-users] Ray produced the same scaffolds and contigs LIU
• 2012/03/01 Re: [Denovoassembler-users] Ray not working in multiple nodes Sébastien Boisvert
• 2012/02/20 Re: [Denovoassembler-users] Reverse Orientation Data Sébastien Boisvert
• 2012/02/15 Re: [Denovoassembler-users] Running Ray on a very large number of cores Allen, Benjamin S
• 2012/02/15 Re: [Denovoassembler-users] Running Ray on a very large number of cores Allen, Benjamin S
• 2012/02/15 Re: [Denovoassembler-users] Running Ray on a very large number of cores Sébastien Boisvert
• 2012/02/15 Re: [Denovoassembler-users] Running Ray on a very large number of cores Allen, Benjamin S
• 2012/02/15 Re: [Denovoassembler-users] RayPlatform: error on compiling Sébastien Boisvert
• 2012/02/14 Re: [Denovoassembler-users] Running Ray on a very large number of cores Sébastien Boisvert
• 2012/02/14 Re: [Denovoassembler-users] Running Ray on a very large number of cores Ben Allen
• 2012/02/08 Re: [Denovoassembler-users] Wrongly detected peak Sébastien Boisvert
• 2012/02/06 Re: [Denovoassembler-users] Broad mate library Sébastien Boisvert
• 2012/02/06 [Denovoassembler-users] Broad mate library Louis Letourneau
• 2012/02/03 Re: [Denovoassembler-users] Query related to Ray-1.7 Sébastien Boisvert
• 2012/01/30 Re: [Denovoassembler-users] assembling large contigs Sébastien Boisvert
• 2012/01/30 Re: [Denovoassembler-users] Ray not working in multiple nodes Sébastien Boisvert
• 2012/01/30 [Denovoassembler-users] Ray not working in multiple nodes Milner Kumar
• 2012/01/27 [Denovoassembler-users] assembling large contigs Sam
• 2012/01/12 Re: [Denovoassembler-users] Automatic Insert Size Detection Problem Sébastien Boisvert
• 2012/01/12 Re: [Denovoassembler-users] Ray and 454 paired-end data Sébastien Boisvert
• 2012/01/05 Re: [Denovoassembler-users] Automatic Insert Size Detection Problem Sébastien Boisvert
• 2012/01/05 [Denovoassembler-users] Automatic Insert Size Detection Problem Egon Ozer
• 2011/12/12 Re: [Denovoassembler-users] Singal 11 segfault Sébastien Boisvert
• 2011/12/11 [Denovoassembler-users] Singal 11 segfault Louis Letourneau
• 2011/12/06 Re: [Denovoassembler-users] About Ray Sébastien Boisvert
• 2011/12/05 Re: [Denovoassembler-users] About Ray Sébastien Boisvert
• 2011/12/04 [Denovoassembler-users] About Ray Zhengshuang Hua
• 2011/11/23 Re: [Denovoassembler-users] Problem in Ray Assembler 1.6.1 Sébastien Boisvert
• 2011/11/22 Re: [Denovoassembler-users] Problem in Ray Assembler 1.6.1 Sébastien Boisvert
• 2011/11/22 Re: [Denovoassembler-users] Problem in Ray Assembler 1.6.1 Sébastien Boisvert
• 2011/11/21 Re: [Denovoassembler-users] Problem in Ray Assembler 1.6.1 Sébastien Boisvert
• 2011/11/21 [Denovoassembler-users] Problem in Ray Assembler 1.6.1 Rakesh Patro
• 2011/11/09 [Denovoassembler-users] Running Ray on a very large number of cores Sébastien Boisvert
• 2011/11/04 Re: [Denovoassembler-users] Reads distance in PE Libs Sébastien Boisvert
• 2011/11/02 Re: [Denovoassembler-users] Reads distance in PE Libs Sébastien Boisvert
• 2011/11/02 Re: [Denovoassembler-users] Segmentation fault Sébastien Boisvert
• 2011/11/02 [Denovoassembler-users] Reads distance in PE Libs CJ
• 2011/11/02 [Denovoassembler-users] Segmentation fault CJ
• 2011/10/25 [Denovoassembler-users] Insert size estimation for single end reads Ola Wallerman
• 2011/10/21 Re: [Denovoassembler-users] RAY questions Sébastien Boisvert
• 2011/10/21 Re: [Denovoassembler-users] RAY questions Sébastien Boisvert
• 2011/10/20 Re: [Denovoassembler-users] RAY questions Sébastien Boisvert
• 2011/10/03 [Denovoassembler-users] RE : Ray v1.7 Sébastien Boisvert
• 2011/10/03 [Denovoassembler-users] Ray v1.7 Sébastien Boisvert
• 2011/09/15 Re: [Denovoassembler-users] RE : Ray uses only one processor? Fedor Gusev
• 2011/09/15 [Denovoassembler-users] RE : Ray uses only one processor? Sébastien Boisvert
• 2011/09/12 [Denovoassembler-users] RE : Question on RAY Sébastien Boisvert
• 2011/09/07 [Denovoassembler-users] RE : RE : RE : Problem to compile on a Mac Sébastien Boisvert
• 2011/09/07 Re: [Denovoassembler-users] RE : RE : Problem to compile on a Mac CJ
• 2011/09/07 [Denovoassembler-users] RE : RE : Problem to compile on a Mac Sébastien Boisvert
• 2011/09/07 Re: [Denovoassembler-users] RE : Problem to compile on a Mac CJ
• 2011/09/06 [Denovoassembler-users] RE : Problem to compile on a Mac Sébastien Boisvert
• 2011/09/06 [Denovoassembler-users] Problem to compile on a Mac CJ
• 2011/09/03 [Denovoassembler-users] RE : RE : RE : RE : RE : RE : RE : RAY just on LAM/MPI? Sébastien Boisvert
• 2011/09/02 [Denovoassembler-users] RE : Peak coverage option Sébastien Boisvert
• 2011/09/02 [Denovoassembler-users] RE : RE : RE : RE : RE : RE : RAY just on LAM/MPI? Sébastien Boisvert
• 2011/09/02 [Denovoassembler-users] RE : "integer conversion" error when compiling Ray 1.6.1 with OpenMPI 1.4.3 / Intel 12.0.3 Sébastien Boisvert
• 2011/09/02 [Denovoassembler-users] RE : "integer conversion" error when compiling Ray 1.6.1 with OpenMPI 1.4.3 / Intel 12.0.3 Sébastien Boisvert
• 2011/08/31 [Denovoassembler-users] Peak coverage option Francesco Vezzi
• 2011/08/30 [Denovoassembler-users] RE : RE : RE : RE : RE : RAY just on LAM/MPI? Sébastien Boisvert
• 2011/08/30 [Denovoassembler-users] RE : RE : RE : RE : RAY just on LAM/MPI? Sébastien Boisvert
• 2011/08/30 [Denovoassembler-users] RE : RE : RE : RAY just on LAM/MPI? Sébastien Boisvert
• 2011/08/23 Re: [Denovoassembler-users] RE : RE : Ray behavior Francesco Vezzi
• 2011/08/23 [Denovoassembler-users] RE : RE : Ray behavior Sébastien Boisvert
• 2011/08/23 [Denovoassembler-users] RE : Ray behavior Sébastien Boisvert
• 2011/08/16 [Denovoassembler-users] RE : Updates on Assemblathon 2 Sébastien Boisvert
• 2011/08/16 [Denovoassembler-users] RE : Updates on Assemblathon 2 Sébastien Boisvert
• 2011/08/10 Re: [Denovoassembler-users] Updates on Assemblathon 2 Torsten Seemann
• 2011/08/09 Re: [Denovoassembler-users] Updates on Assemblathon 2 Matthew MacManes
• 2011/08/02 [Denovoassembler-users] RE : seg fault issues when kmer < 40 Sébastien Boisvert
• 2011/07/26 Re: [Denovoassembler-users] seg fault issues when kmer < 40 Matthew MacManes
• 2011/07/25 [Denovoassembler-users] RE : Illumina MP Reads in Ray Sébastien Boisvert
• 2011/07/25 [Denovoassembler-users] RE : make error with latest version Sébastien Boisvert
• 2011/07/25 [Denovoassembler-users] RE : seg fault issues when kmer < 40 Sébastien Boisvert
• 2011/07/24 [Denovoassembler-users] seg fault issues when kmer < 40 Matthew MacManes
• 2011/07/22 [Denovoassembler-users] make error with latest version Matthew MacManes
• 2011/07/21 [Denovoassembler-users] Illumina MP Reads in Ray Adrian Platts
• 2011/07/21 [Denovoassembler-users] RE : RE : RE : RE : RE : RE : Ray assembly kmer coverage question Sébastien Boisvert
• 2011/07/21 [Denovoassembler-users] RE : RE : RE : RE : RE : Ray assembly kmer coverage question Sébastien Boisvert
• 2011/07/21 Re: [Denovoassembler-users] RE : No observed peak in coverage distribution (454 test data) David Eccles (gringer)
• 2011/07/21 [Denovoassembler-users] RE : RE : RE : RE : Ray assembly kmer coverage question Sébastien Boisvert
• 2011/07/21 [Denovoassembler-users] RE : No observed peak in coverage distribution (454 test data) Sébastien Boisvert
• 2011/07/21 [Denovoassembler-users] No observed peak in coverage distribution (454 test data) David Eccles (gringer)
• 2011/07/20 [Denovoassembler-users] RE : RE : RE : Ray assembly kmer coverage question Sébastien Boisvert
• 2011/07/20 Re: [Denovoassembler-users] RE : RE : Ray assembly kmer coverage question Walter Eckalbar
• 2011/07/20 Re: [Denovoassembler-users] RE : RE : Ray assembly kmer coverage question Adrian Platts
• 2011/07/20 [Denovoassembler-users] RE : RE : Ray assembly kmer coverage question Sébastien Boisvert
• 2011/07/20 [Denovoassembler-users] RE : Ray assembly kmer coverage question Sébastien Boisvert
• 2011/07/20 [Denovoassembler-users] Ray commands for PE and MP libraries. Karl.Gordon
• 2011/07/19 [Denovoassembler-users] Ray assembly kmer coverage question Walter Eckalbar
• 2011/07/18 [Denovoassembler-users] Ray speedrun on illumina phiX data David Eccles (gringer)
• 2011/07/18 [Denovoassembler-users] RE : RE : RE : RE : RE : what does this warning mean? Sébastien Boisvert
• 2011/07/18 [Denovoassembler-users] RE : Should we expect the same assembly given the same inputs? Sébastien Boisvert
• 2011/07/18 Re: [Denovoassembler-users] Confused about coding -- completed seeds without distributions David Eccles (gringer)
• 2011/07/17 [Denovoassembler-users] Should we expect the same assembly given the same inputs? Rob Syme
• 2011/07/15 [Denovoassembler-users] RE : RE : RE : RE : what does this warning mean? Sébastien Boisvert
• 2011/07/15 [Denovoassembler-users] RE : RE : RE : what does this warning mean? Sébastien Boisvert
• 2011/07/14 [Denovoassembler-users] Ray v1.6.1 is available Sébastien Boisvert
• 2011/07/14 [Denovoassembler-users] RE : what does this warning mean? Sébastien Boisvert
• 2011/07/14 [Denovoassembler-users] what does this warning mean? Huanle LIU
• 2011/07/13 [Denovoassembler-users] Updates on Assemblathon 2 Sébastien Boisvert
• 2011/07/13 [Denovoassembler-users] RE : Confused about coding -- completed seeds without distributions Sébastien Boisvert
• 2011/07/13 [Denovoassembler-users] RE : Confused about coding -- completed seeds without distributions Sébastien Boisvert
• 2011/07/13 Re: [Denovoassembler-users] Confused about coding -- completed seeds without distributions David Eccles (gringer)
• 2011/07/13 Re: [Denovoassembler-users] Confused about coding -- completed seeds without distributions David Eccles (gringer)
• 2011/07/12 [Denovoassembler-users] Confused about coding -- completed seeds without distributions David Eccles (gringer)
• 2011/07/11 [Denovoassembler-users] RE : Quick test run of Ray using phiX genome Sébastien Boisvert
• 2011/07/11 Re: [Denovoassembler-users] RE : Possible bugs in code/assembler/SequencesLoader.cpp David Eccles (gringer)
• 2011/07/11 [Denovoassembler-users] RE : Possible bugs in code/assembler/SequencesLoader.cpp Sébastien Boisvert
• 2011/07/11 [Denovoassembler-users] RE : The system is out of memory Sébastien Boisvert
• 2011/07/11 [Denovoassembler-users] Possible bugs in code/assembler/SequencesLoader.cpp David Eccles (gringer)
• 2011/07/11 [Denovoassembler-users] The system is out of memory Matthew MacManes
• 2011/07/11 Re: [Denovoassembler-users] RE : Kmer formats and colour-space / bit logic David Eccles (gringer)
• 2011/07/11 [Denovoassembler-users] Quick test run of Ray using phiX genome David Eccles (gringer)
• 2011/07/06 [Denovoassembler-users] RE : Kmer formats and colour-space / bit logic Sébastien Boisvert
• 2011/07/05 Re: [Denovoassembler-users] Kmer formats and colour-space / bit logic Eccles, David
• 2011/07/03 [Denovoassembler-users] RE : combined colour space / base space encoding in Read structure Sébastien Boisvert
• 2011/07/03 [Denovoassembler-users] RE : Kmer format -- storing colour-space Sébastien Boisvert
• 2011/07/03 [Denovoassembler-users] RE : purpose of _getOutgoingEdges / _getIngoingEdges Sébastien Boisvert
• 2011/07/03 [Denovoassembler-users] RE : purpose of _getOutgoingEdges / _getIngoingEdges Sébastien Boisvert
• 2011/07/03 [Denovoassembler-users] RE : purpose of _getOutgoingEdges / _getIngoingEdges Sébastien Boisvert
• 2011/07/03 [Denovoassembler-users] RE : colour space reads Sébastien Boisvert
• 2011/07/02 Re: [Denovoassembler-users] purpose of _getOutgoingEdges / _getIngoingEdges Eccles, David
• 2011/07/01 Re: [Denovoassembler-users] purpose of _getOutgoingEdges / _getIngoingEdges David Eccles (gringer)
• 2011/07/01 [Denovoassembler-users] purpose of _getOutgoingEdges / _getIngoingEdges David Eccles (gringer)
• 2011/06/29 Re: [Denovoassembler-users] Kmer format -- storing colour-space David Eccles (gringer)
• 2011/06/28 Re: [Denovoassembler-users] combined colour space / base space encoding in Read structure David Eccles (gringer)
• 2011/06/27 Re: [Denovoassembler-users] colour space reads Eccles, David
• 2011/06/27 Re: [Denovoassembler-users] Kmer Academy Sébastien Boisvert
• 2011/06/27 Re: [Denovoassembler-users] Denovoassembler-users Digest, Vol 10, Issue 8 Sébastien Boisvert
• 2011/06/25 Re: [Denovoassembler-users] Kmer Academy David Eccles (gringer)
• 2011/06/23 Re: [Denovoassembler-users] Denovoassembler-users Digest, Vol 10, Issue 8 Eccles, David
• 2011/06/22 Re: [Denovoassembler-users] More: Ray, 1.6.1-rc1 Phillip San Miguel
• 2011/06/22 Re: [Denovoassembler-users] More: Ray, 1.6.1-rc1 Sébastien Boisvert
• 2011/06/20 Re: [Denovoassembler-users] Long Kmer Assembler a bit slower? Sébastien Boisvert
• 2011/06/20 Re: [Denovoassembler-users] More: Ray, 1.6.1-rc1 Sébastien Boisvert
• 2011/06/20 Re: [Denovoassembler-users] More: Ray, 1.6.1-rc1 Phillip San Miguel

• Later messages