On Mon, Nov 4, 2013 at 10:33 AM, Peter Cock <p.j.a.c...@googlemail.com> wrote:
> More "missing test results", yet listed under "Latest revision:
> failing tool tests":
> http://testtoolshed.g2.bx.psu.edu/view/peterjc/get_orfs_or_cdss
> http://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_primer_clip
> http://testtoolshed.g2.bx.psu.edu/view/peterjc/seq_select_by_id
> The common feature is they all depend on Biopython - perhaps that
> failed to install, and the tests were skipped?

I updated all three of these tools (and others) on the Test Tool
Shed yesterday to address my misconfigured dependencies
(thanks Greg!), e.g.

(Note that other tools with the same broken dependency setup
did not suffer from the "missing test output" problem - they
were showing the tool's test failures)

The good news is that seq_select_by_id has gone from an
apparent failure with missing test output, to a passing test:

The bad news is there are still 2 apparently failing tests with
missing test output:


Similarly over on the Main Tool Shed (where I have not yet
updated these two tools).


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