Thank you, you solved my problem. Maybe you can help with one more thing, Can I
interact in the middle of an workflow execution ? For example: I have a
workflow with ten steps and after I started this, I want to select options
always before each step (like a software instalation). Is it
, 20:32 +0300 schrieb Ramon Tiburski:
Thank you, you solved my problem. Maybe you can help with one more
thing, Can I interact in the middle of an workflow execution ? For
example: I have a workflow with ten steps and after I started this, I
want to select options always before each step
I do?
Thank you
Subject: Re: [galaxy-dev] How can I get a txt output file from R
From: bjoern.gruen...@gmail.com
To: ramao_tiago_tibur...@hotmail.com
CC: galaxy-...@bx.psu.edu
Date: Mon, 30 Sep 2013 20:01:41 +0200
Am Montag, den 30.09.2013, 20:32 +0300 schrieb Ramon Tiburski:
Thank you
Am Montag, den 30.09.2013, 20:32 +0300 schrieb Ramon Tiburski:
Thank you, you solved my problem. Maybe you can help with one more
thing, Can I interact in the middle of an workflow execution ? For
example: I have a workflow with ten steps and after I started
this, I
want to select
to provide the code you have written and the error messages you
get. Otherwise, it is very difficult for the community to help you.
Regards, Hans-Rudolf
On 08/16/2013 03:43 PM, Ramon Tiburski wrote:
I had tried a few things with this link, but I could not, I must be
doing something wrong
I have a tool that uses two dates to fetch data in a database.
I am using a parameter type called datetime in the field type. It uses
javascript and allows a date to be selected through a calendar. When I use it
as a tool works perfectly, but when I try to use the workflow got an error.
When I
Thank you so much Jeremy. I solved my problem with your tips.
Subject: Re: [galaxy-dev] Can I use javascript in the xml to select a date on a
calender?
From: jeremy.goe...@emory.edu
Date: Fri, 7 Jun 2013 16:55:40 -0400
CC: galaxy-dev@lists.bx.psu.edu
To: ramao_tiago_tibur...@hotmail.com
I want
Hi,
I want to select a date from a calender in my tool, but I think that it's not
possible in the xml. I was looking for some examples with xml, javascript and
jquery but I could not do what I wanted. My code is:
tool id=idPlot name=Plot
command interpreter=bashr_wrapper.sh
I have a problem with a tool in R. I can't load the RPostgreSQL library that I
get the following error:
ERROR: carregando pacotes exigidos: dbi
My xml is this:
command interpreter=bashr_wrapper.sh $script_file/command
configfiles
configfile name=script_file
library(RPostgreSQL)
...
Hi,
I uploaded some data and when I click in the eye to see
the data I get the following error. I don't know what can I do to fix
this problem, I trying install some packges from python but didn't solve
my problem. I'm starting think about my operational system, I have
ubuntu 12.04
...@hotmail.com
Hi Ramon,
I've committed a patch to the stable branch that should resolve this issue.
Please update your Galaxy instance and let us know if this has fixed it for you.
Thanks for using Galaxy,
Dan
On May 9, 2013, at 8:40 AM, Ramon Tiburski wrote:Hi,
I uploaded some data and when I click
using mercurial, stop your Galaxy instance and
go into the Galaxy root directory and execute:
hg pull -u
Then start your Galaxy instance back up.
On May 9, 2013, at 12:36 PM, Ramon Tiburski wrote:OK. thank you so much, but
how can I update my instance?
Subject: Re: [galaxy-dev
I created a new tool in c++, and the filename is the name of my executable
file. I have the xml and the executable file in the same directory, but I get
this error when I try to run the tool. Someone can help me with this error?
Thank you
CC: galaxy-dev@lists.bx.psu.edu
On Thu, Apr 25, 2013 at 5:25 PM, Ramon Tiburski
ramao_tiago_tibur...@hotmail.com wrote:
I created a new tool in c++, and the filename is the name of my executable
file. I have the xml and the executable file in the same directory, but I
get this error when I
Peter,
Thank you so much for the help
Date: Thu, 25 Apr 2013 18:35:33 +0100
Subject: Re: [galaxy-dev] /bin/sh: 1: filename: not found
From: p.j.a.c...@googlemail.com
To: ramao_tiago_tibur...@hotmail.com
CC: galaxy-dev@lists.bx.psu.edu
On Thu, Apr 25, 2013 at 5:37 PM, Ramon Tiburski
Hi, I have this problem:
I uploaded some data and when I click to display data in browser (the eye) I
get this error:
Server Error:
URL: http://localhost:8080/datasets/d413a19dec13d11e/display/?preview=True
Module paste.exceptions.errormiddleware:144 in __call__
app_iter =
: Re: [galaxy-dev] Unable to finish job
From: n...@bx.psu.edu
Date: Tue, 16 Apr 2013 11:45:37 -0400
CC: galaxy-dev@lists.bx.psu.edu
To: ramao_tiago_tibur...@hotmail.com
On Apr 16, 2013, at 9:37 AM, Ramon Tiburski wrote:
I,m getting this error when I try to convert some data, can someone
I,m getting this error when I try to convert some data, can someone help me?
Traceback (most recent call last):
File /home/ramao/galaxy/lib/galaxy/jobs/runners/local.py, line 156, in
run_job
job_wrapper.finish( stdout, stderr, exit_code )
File
Hi,I need to create a new tool in c++, but I'm with a lot of difficult to link
the cpp or exe (I don't know) with the xml document. Can you help me with an
example that receives a txt file with a phrase and shows another txt file
without the spaces of this phrase?
Thanks
I started studying the galaxy and would like to know about the power of this
tool, you could tell me why using the galaxy and what are its advantages
compared to other similar systems. And another question, can I adapt galaxy to
another area like the agronomy, only with creating new tools?
Hi,
I get this error, what can I do in order to solve this problem?
Traceback (most recent call last):
File
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/tools/source/upload.py,
line 596, in module
__main__()
File
Hi,
I installed galaxy locally and want to develop some tools, but I don't know
where start. I would know what are wrappers and what I could do with this, and
if is possible develop a tool in java.
Thanks
Ramão
at 11:11 AM, Ramon Tiburski
ramao_tiago_tibur...@hotmail.com wrote:
Hi,
I installed galaxy locally and want to develop some tools, but I don't know
where start. I would know what are wrappers and what I could do with this,
and if is possible develop a tool in java.
Thanks
Ramão
Hi,
I have a big problem with my local galaxy, I'm trying to register me at the
local intance of galaxy but I always have the error:
Error during registration phase. Please contact the administrator
So I can't use the workflows and the history. Anyone can help me?
Thanks,
Ramão
Hello, I'm trying to register me as a user in the galaxy-es. I installed
galaxy-es locally and always I try to register a user I have the error message:
Error during registration phase. Please contact the administrator
Thanks
Ramão Tiago Tiburski
25 matches
Mail list logo
