gpc-dev / Cancer RCR 21 Nov agenda and meeting notes

What else for tomorrow? * 21 Nov shared meeting ntoes * scribe: UTHSCSA, presuming the offer still holds snapshot: 1. Convene, take roll, review records and

RE: [gpc-informatics] #659: Develop process for non-GPC sites to transfer data to UIOWA

/trac/Project/attachment/ticket/652/cancer-rcr-drugs.sql -- Dan From: Gryzlak, Brian M [brian-gryz...@uiowa.edu] Sent: Thursday, November 09, 2017 3:06 PM To: Dan Connolly; gpc-dev@listserv.kumc.edu; Tamara McMahon Subject: RE: [gpc-informatics] #659: Develop

RE: [gpc-informatics] #659: Develop process for non-GPC sites to transfer data to UIOWA

; that should let you import it into UIOWA's REDCap if you want to play with it. -- Dan From: Gryzlak, Brian M [brian-gryz...@uiowa.edu] Sent: Thursday, November 09, 2017 2:03 PM To: gpc-dev@listserv.kumc.edu; Dan Connolly; Tamara McMahon Subject: RE

RE: regulatory approval to select by real DX dates? RE: RCR Aim 1 survey feedback - site responses requested

The list of CDM tables in ticket:656#comment:2<https://informatics.gpcnetwork.org/trac/Project/ticket/656#comment:2> answers my question: yes, we're reporting lots of other dates. -- Dan From: Dan Connolly Sent: Tuesday, November 07, 2017 9:45 AM To: G

regulatory approval to select by real DX dates? RE: RCR Aim 1 survey feedback - site responses requested

Tamara, would you please ask Karen B. about this? Russ just happened to be in the office after his class; he had a suggestion, but he wasn't quite sure and asked that you consult Karen... I see "Verify that you will use real diagnosis dates to select cohort" in the feedback items. I don't see

gpc-dev / Cancer RCR 7 Oct agenda and meeting notes

What else for tomorrow? * gpc-dev shared notes 7 Oct; scribe: MU current snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00am

gpc-dev / RCR 24 Oct agenda and meeting notes

What else for tomorrow? * gpc-dev 24 Oct shared notes; scribe: UIOWA current snapshot: 1. Convene, take roll, review records and plan next meeting(s) *

RE: SNOW Shrine Hub

You might review the relevant design issue ticket: #332 How to deal with & in i2b2 paths, especially in NAACCR tumor registry ontology? -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on

update from Oct 6 PCORNet Data Committee Meeting RE: GPC Dev / Cancer RCR Meeting agenda and meeting notes 10 Oct 2017

I found... * Draft Agenda Sep 26<http://listserv.kumc.edu/pipermail/data.pcornet/2017q3/000577.html> * Notes to appear: data.pcornet<http://listserv.kumc.edu/pipermail/data.pcornet/> archives -- Dan ________ From: Dan Connolly Sent: Tuesday

RE: GPC Dev / Cancer RCR Meeting agenda and meeting notes 10 Oct 2017

OK... where do we find details on the CDM 4 call for review? Are notes from the data committee meeting handy? -- Dan From: Russ Waitman Sent: Tuesday, October 10, 2017 9:08 AM To: Dan Connolly; gpc-...@listserv.kumc.edu; , Subject: RE: GPC Dev / Cancer RCR

GPC Dev / Cancer RCR Meeting agenda and meeting notes 10 Oct 2017

What else for tomorrow? * shared notes for 10 Oct; scribe: MCRF snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central

RE: UMN SNOW Tumor Registry

Fantastic! verified: UMN NAACCR test@16:52:27 Gold stars all around: I got a plausible count from UMN-AHC for "Demographics + Diagnoses@16:56:26" as well. -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on behalf of Andrew Hangsleben

RE: SNOW Shrine Ontology

, 2017 1:18 PM To: Dan Connolly Cc: GPC-DEV@LISTSERV.KUMC.EDU Subject: Re: SNOW Shrine Ontology Thanks Dan, we should be up and running at UMN now; I ran a few queries to verify we were returning results. Out of curiosity, is there any reason we aren't using the PCORnet ontology directly

RE: SNOW Shrine Ontology

Yes, that's how it works. #411 should have details. -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on behalf of Andrew Hangsleben [hangs...@umn.edu] Sent: Tuesday, October 03, 2017 10:43 AM

GPC SNOW SHRINE status at LEC - 2 Weeks: gold: UTSW, KUMC; silver: MCRF; bronze: WISC, UNMC

I just ran my weekly demographics + diagnosis site-check query, and the results are pretty much the same as last week: * plausible patient count: UTSW, KUMC * counts, but not plausible: MCRF (needs data refresh - #531) *

gpc-dev / Cancer RCR Oct 3 agenda and meeting notes

Note the featured item: 1. Milestone:cancer-rcr-1 due 13 Oct * ​Cancer RCR Aim 1 schedule spreadsheet,

ADAPTABLE Query 3

FYI... From: Riley, Danielle [danielle-ri...@uiowa.edu] Sent: Monday, September 25, 2017 10:40 AM To: Dan Connolly Subject: DEV call agenda items for 9/26/17 Hi Dan, Below are ADAPTABLE updates that I think the DEV team members would be interested in knowing

gpc-dev 26 Sep agenda and meeting notes

What else for tomorrow? * gpc-dev 26 Sep shared notes; scribe: WISC current snapshot: 1. Convene, take roll, review records and plan next meeting(s) * 11:00am

RE: GPC c003, Initial Refresh Feedback

At the risk of getting an anybody/somebody/nobody response, I'm going to use one message for the rest of these: Each site please respond with an estimate of whether you'll get this addressed in the Oct 16 refresh: IU: ICD9 past Oct 15 UIOWA: Encounter date skew, UN encounters, Procedures

MCW: NI Encounters, Procedures per IP RE: GPC c003, Initial Refresh Feedback

Brad, are you likely to get these addressed by the Oct 16 refresh? -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on behalf of Russ Waitman [rwait...@kumc.edu] Sent: Thursday, September 21, 2017 1:13 PM To: GPC-DEV@LISTSERV.KUMC.EDU Cc: Darcy Louzao,

MCRF IC encounters, INR labs RE: GPC c003, Initial Refresh Feedback

Laurel, Marshfield folks, what are the odds you can get these addressed by the Oct 16 refresh? -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on behalf of Russ Waitman [rwait...@kumc.edu] Sent: Thursday, September 21, 2017 1:13 PM To:

CMH: ICD9/10, vital outliers RE: GPC c003, Initial Refresh Feedback

OK, but as usual, let's start the discussion in writing and follow up on the call if that's not sufficient. CMH folks, what are the odds you can get CMH: ICD9/10, vital outliers addressed in the October 16th refresh? -- Dan From: Gpc-dev

gpc-dev 19 Sep agenda and meeting notes

What else for tomorrow? * gpc-dev 19 Sep shared notes; scribe: UTSW 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

gpc-dev 12 Sep agenda and meeting notes

What else for tomorrow? * gpc-dev 12 Sep shared notes; scribe: UMN 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

gpc-dev 29 Aug agenda and meeting notes (in progress)

What else for tomorrow? Please excuse the delay in collecting the agenda into one place; it's something of a skeleton so far... * gpc-dev 29 Aug shared notes; scribe: KUMC

gpc-dev 22 Aug meeting notes

Please do join us today at 11. ​Meeting ID and access code: 817-393-381; call +1 (571) 317-3131 Agenda is in progress; please excuse the delay... * gpc-dev 22 Aug shared

RE: gpc-dev 15 Aug agenda and meeting notes

Gotomeeting is on the fritz. George is unavailable. The meeting is canceled. The people noted as owners of the shrine issues, please hit the "accept" button or otherwise acknowledge that you own them. -- Dan ____ From: Dan Connolly Sent: Monday, August 14,

gpc-dev 15 Aug agenda and meeting notes

What else for tomorrow? * gpc-dev 15 Aug shared notes; scribe: WISC 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

gpc-dev 8 Aug agenda and meeting notes

What else for tomorrow? * gpc-dev 8 Aug shared notes; scribe: scribe: MCRF? (offer to scribe last week still good this week?) 1. Convene, take roll, review records

how KUMC loads the SSDMF files

The bulk of the work is done in ssdmf_load.sql. It matches on SSN and birth date and adds info to patient_mapping, encounter_mapping, patient_dimension, and observation_fact. The table schema we use is in

gpc-dev 1 Aug: cancel in 3... 2... 1...

I haven't managed to get an agenda together. Is there anything sufficiently important to discuss today that I shouldn't cancel? -- Dan ___ Gpc-dev mailing list Gpc-dev@listserv.kumc.edu http://listserv.kumc.edu/mailman/listinfo/gpc-dev

gpc-dev 25 July agenda and meeting notes

What else for tomorrow? * gpc-dev 25 July shared notes; scribe: UTSW 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

RE: unable to connect to babel webclient

Try again? It didn't reboot cleanly after some regular maintenance. Lav address the issue. I can log in now. -- Dan From: Mosa, Abu S. [mo...@health.missouri.edu] Sent: Thursday, July 20, 2017 11:49 AM To: Dan Connolly Cc: <gpc-dev@listserv.kumc.edu>; Ma

RE: facility_id mapping for Next-D (#539)

Cc: Dan Connolly; Mei Liu; a...@nm.org; nicholas-c-sm...@uiowa.edu; phillip.ree...@utsouthwestern.edu; Lindsey Lynne Cook; Russ Waitman; brian-gryz...@uiowa.edu; George Kowalski; meye0...@umn.edu; jay.peder...@unmc.edu; danh...@regenstrief.org; adfre...@regenstrief.org; mcneele

gpc-dev 18 Jul agenda and meeting notes (incl. next-d geocoding #544)

What else for tomorrow? * gpc-dev 18 July shared notes; scribe: UMN 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

RE: [gpc-informatics] #544: how to convert ACS raw variables to CAP variables (e.g. type of health insurance)?

nged to 000 -- Dan From: Bernard Black [bbl...@kellogg.northwestern.edu] Sent: Monday, July 17, 2017 1:09 PM To: gpc-dev@listserv.kumc.edu; Dan Connolly; Mei Liu; furmanc...@icnanotox.org; kosin...@mcw.edu Cc: btay...@mcw.edu; vanri...@umn.edu; meye0...@umn.edu; Lindsey Cook

gpc-dev 11 Jul agenda and meeting notes

What else for tomorrow? * gpc-dev 11 July shared notes - scribe: UTHSCSA 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central

gpc-dev 27 June agenda and meeting notes

What else for tomorrow? * gpc-dev 27 June shared notes - scribe: MU 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

RE: CDM 3.1 beta (#578) [was: GPC-Dev meeting 6/20 - Canceled]

beta report? Is that different from the issue tracker Laurel referred us to in https://informatics.gpcnetwork.org/trac/Project/ticket/578#comment:11 ? -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on behalf of Debbie Yoshihara

RE: Cancer CRG DROC Request presentation for GPC Dev call 06/13/2017

The assumptions slide is quite handy. Regarding "That each site has the ability to run a query that joins both the CDM and i2b2" we can do that, but our CDM is de-identified, i.e. date-shifted by up to a year, so the years are going to be fuzzy. Is that good enough? Or are we going to need to

gpc-dev 13 Jun agenda and meeting notes

o attend 2. Please complete ADAPTABLE tables by June 14<http://listserv.kumc.edu/pipermail/gpc-dev/2017q2/004037.html> Dan Connolly 3. #596<https://informatics.gpcnetwork.org/trac/Project/ticket/596> targeted cancer therapy study - how to fulfill feasibility data request? <https:

FW: GPC Dev Weely Teleconference

:16010101T03 TZOFFSETFROM:-0600 TZOFFSETTO:-0500 RRULE:FREQ=YEARLY;INTERVAL=1;BYDAY=2SU;BYMONTH=3 END:DAYLIGHT END:VTIMEZONE BEGIN:VEVENT ORGANIZER;CN=Dan Connolly;SENT-BY="MAILTO:mo...@health.missouri.edu":MAILTO:d conno...@kumc.edu ATTENDEE;ROLE=REQ-PARTICIPANT;PARTSTAT=NEEDS-ACTION;RSVP=FALSE;CN=

gpc-dev 6 Jun agenda and meeting notes

ce getting NCD code from administrations in comment:27 * help moving CDM SAS to linux<http://listserv.kumc.edu/pipermail/gpc-dev/2017q2/004009.html> Dan Connolly 4. Milestone:cohort-char1<https://informatics.gpcnetwork.org/trac/Project/milestone/cohort-char1> (obesity

RE: SNOW SHRINE due date?

v.kumc.edu] On Behalf Of Dan Connolly Sent: Thursday, June 1, 2017 4:17 PM To: Gryzlak, Brian M <brian-gryz...@uiowa.edu>; gpc-dev@listserv.kumc.edu Subject: RE: SNOW SHRINE due date? The due date for milestone:snow-shrine-2<https://informatics.gpcnetwork.org/trac/Project/milestone/snow-s

help moving CDM SAS to linux

We're hitting these errors only on linux; anybody seen them? 1965: ERROR: Variable _FREQ_ is not on file WORK.STATS. 1966: ERROR: Invalid DROP, KEEP, or RENAME option on file WORK.STATS. 1967: ERROR: Variable _type_ is not on file WORK.STATS. ... -- Dan

RE: SNOW SHRINE due date?

The due date for milestone:snow-shrine-2 was April... it's now... um... May 29. You got your time machine installed and running, right? I suppose June 30 should work. I tend to keep due dates on Mondays, in time for

FW: [gpc-informatics] #601: Advice on Oracle/SQL Server maintenance protocols

, we're keeping an eye on postgres and trying not to invest in Oracle techniques that don't port readily to postgres. -- Dan From: GPC Informatics [d...@madmode.com] Sent: Tuesday, May 30, 2017 3:36 PM To: campb...@unmc.edu; Dan Connolly Subject: [gpc

FW: GPC Dev Weely Teleconference

:16010101T03 TZOFFSETFROM:-0600 TZOFFSETTO:-0500 RRULE:FREQ=YEARLY;INTERVAL=1;BYDAY=2SU;BYMONTH=3 END:DAYLIGHT END:VTIMEZONE BEGIN:VEVENT ORGANIZER;CN=Dan Connolly;SENT-BY="MAILTO:mo...@health.missouri.edu":MAILTO:d conno...@kumc.edu ATTENDEE;ROLE=REQ-PARTICIPANT;PARTSTAT=NEEDS-ACTION;RSVP=FALSE;CN

gpc-dev 30 May agenda and meeting notes

I only know this much of the agenda; suggestions are welcome: * gpc-dev 30 May shared meeting notes; scribe: UIOWA 1. Convene, take roll, review records and plan next

RE: combining notes

Do you use SQL to do the iterating and concatenating? Or something else like python or Java? That is: can this query be used as the input query to the deid software? Or is there a separate prep step to put the concatenation results back in the DB? -- Dan

RE: Linking Geocoding data with i2b2

At KUMC, reproducing MU's work on i2b2 integration remains largely on our TODO list. But as for tips for working with the data, we've done enough to be able to do ad-hoc queries such as "count HERON patients by income group": select 'Over' || to_char(hi.dollar_group, '$999,999') income_group,

getting gpc-dev work done (vs. asking for agenda items)

Periodic public service announcement, prompted by several recent messages putting me in the critical path unnecessarily... The sources for gpc-dev weekly agenda items are: 1. stuff from last week

RE: Next-D labs

: Monday, May 22, 2017 1:10 PM To: Dan Connolly; Campbell, James R; Al'ona Furmanchuk Cc: gpc-dev@listserv.kumc.edu Subject: Re: Next-D labs Yes except the two glucose by test strip (below) should be removed. Jim, I noticed this after our conversation but to be consistent with removing glucose

RE: Next-D labs

: Campbell, James R [campb...@unmc.edu] Sent: Wednesday, May 10, 2017 9:42 AM To: Dan Connolly Cc: gpc-dev@listserv.kumc.edu Subject: Re: Next-D labs Use the second worksheet in the enclosed Excel Dan From: Dan Connolly <dconno...@kumc.edu> Sent: Wednesday,

RE: [gpc-informatics] #444: Pregnancy Status for NEXT-D

To: <gpc-dev@listserv.kumc.edu> Cc: Nathan Graham; Laurel Verhagen; Dan Connolly; Sravani Chandaka; McNeeley, Todd Alexander; Mei Liu; Campbell, James R; Satyender Goel; Bernard Black; Charon Gladfelter Subject: Re: [gpc-informatics] #444: Pregnancy Status for NEXT-D Did I get it right th

RE: gpc-dev 16 May agenda and meeting notes

17-393-381<https://global.gotomeeting.com/meeting/join/817393381>; call +1 (571) 317-3131 ________ From: Dan Connolly Sent: Monday, May 15, 2017 3:52 PM To: gpc-dev@listserv.kumc.edu Subject: gpc-dev 16 May agenda and meeting notes I'm way behind on putting an age

gpc-dev 16 May agenda and meeting notes

I'm way behind on putting an agenda together. Please plan to meet, though. Same bat-time, same bat-channel. -- Dan ___ Gpc-dev mailing list Gpc-dev@listserv.kumc.edu http://listserv.kumc.edu/mailman/listinfo/gpc-dev

RE: Geo Coding

___ From: Gardner, Bret J [bret.gard...@unmc.edu] Sent: Thursday, May 11, 2017 12:22 PM To: gpc-dev@listserv.kumc.edu Cc: Dan Connolly Subject: Geo Coding UNMC is working through geo-coding and linking to socioeconomic status. We have obtained necessary median income information

RE: question on GROUSE Extract

Good question, George. Russ? -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on behalf of Kowalski, George [gkowal...@mcw.edu] Sent: Tuesday, May 09, 2017 7:34 PM To: gpc-dev@listserv.kumc.edu Subject: question on GROUSE Extract All, Per

RE: Next-D labs

This is great to have, but as tried to say in the NEXT-D - 4/6/17 GPC-CAP Bi-Weekly Meeting, we need something we can save as CSV and load into a database. I'm not sure what happens to strikethru formatting when this is saved to CSV; separate columns with yes/no or 1/0 would be more

RE: Greetings from USC!

Yes, the tool is compatible with SQL Server. It originally required a lot of work to get python talking with SQL Server, but some sites managed that. In recent work (#335), I am reworking the tool to use the same JDBC drivers you use

RE: gpc-dev 9 May agenda and meeting notes

t;, I don't see anything you are expected to do in preparation. --- Dan From: Gryzlak, Brian M [brian-gryz...@uiowa.edu] Sent: Tuesday, May 09, 2017 8:14 AM To: Dan Connolly; gpc-dev@listserv.kumc.edu Cc: Al'ona Furmanchuk; charon.gladfel...@northwestern.edu Subje

gpc-dev 9 May agenda and meeting notes

What else for tomorrow? * gpc-dev 9 May shared notes; scribe: MCRF current snapshot with proposed agenda: 1. Convene, take roll, review records and plan next

RE: CRG rapid cycle grants

Brad, you asked whether we should talk about the recent DROC request in today's dev call; I hadn't thought of it that way, but now that you mention it, yes, I suppose that's a good idea. I added it to today's

RE: gpc-dev 2 May agenda? meeting?

about each site's tools and techniques and refine them with some details about the CDM build process. -- Dan From: Dan Connolly Sent: Monday, May 01, 2017 12:14 PM To: gpc-dev@listserv.kumc.edu Cc: charon.gladfel...@northwestern.edu; Al'ona Furmanchuk Subject: gpc

gpc-dev 2 May agenda? meeting?

If anybody has made any progress that they have not shared, please do so right away (but not in reply to this message; send a message with an appropriate subject or make a comment on a relevant ticket). I drafted a 2 May

RE: Data dictionary for obesity payer Redcap project?

I think the most convenient way to make a CSV file is to start with the import template on the the data import tool page; I just checked, and you're listed as having access to it. If you want details about codes for

RE: next-d medications issues?

OK. A week in advance works. -- Dan From: Bernard Black [bbl...@kellogg.northwestern.edu] Sent: Tuesday, April 25, 2017 4:25 PM To: Dan Connolly; abel@nm.org Cc: Al'ona Furmanchuk; Charon Gladfelter; Mei Liu; gpc-dev@listserv.kumc.edu Subject: RE: next-d

RE: Overview of Data Requested - Next-D meeting prep

://github.com/dckc/nextd-study-support/commits/master -- Dan From: Dan Connolly Sent: Tuesday, April 25, 2017 2:53 PM To: Bernard Black Cc: Mei Liu; charon.gladfel...@northwestern.edu; gpc-dev@listserv.kumc.edu; abel@nm.org; Al'ona Furmanchuk Subject: Overview of Data

next-d Procedures issues?

I see "Procedures (Abel Kho)" on the next-d May 15-16 agenda. Are there issues to resolve? I don't see anything about procedures in Definitions_Part1-2017-01-06-bb.docx Definitions_Part2-2017-03-23-AF.docx I see "PROCEDURES" in the Apr 6 SQL

next-d medications issues?

I see "v. Medications (Abel Kho)" on the next-d May 15-16 agenda. Are there issues to resolve? Are there some relevant materials to study? I made some changes to the relevant parts of the Oracle version of the SQL code, but I don't believe they're substantive; I don't believe they change the

Overview of Data Requested - Next-D meeting prep

Dr. Black, In the NEXT-D In-Person Meeting draft agenda, I see: * Overview of Data Requested (Bernie Black) Are there any materials to study in advance? In dropbox, I see: Definitions_Part1-2017-01-06-bb.docx (which bears 1/5/2017 at the top) Definitions_Part2-2017-03-23-AF.docx Are

RE: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

to just attach a .zip file to a message to gpc-dev, that would be a place to start. -- Dan From: Pedersen, Jay G [jay.peder...@unmc.edu] Sent: Monday, April 24, 2017 10:06 PM To: Klann, Jeffrey G.; Dan Connolly Cc: Hubert Hickman; Russ Waitman; gpc-dev

Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

Yes, it's on babel. But Jim wrote that you were sharing it via git as well. Not so? On Apr 24, 2017 7:44 PM, "Pedersen, Jay G" wrote: Hi, The Medication ontology exists in BABEL, at folder UNMC: SCILHS, in the Medications subfolder. I tried it moments ago, and it

AdapterMappings: why 1-to-many?

Why do some entries in `AdapterMappings.xml` have more than one value? For example: \\SHRINE\i2b2\Demographics\Age\ \\HIMC_DEMOGRAPHICS\i2b2\Demographics\Age\0-9 years old\

gpc-dev 25 Apr agenda and meeting notes

What else for tomorrow? It's pretty quiet out there... :) * 25 Apr gpc-dev shared notes; scribe: UMN 1. Convene, take roll, review records and plan next meeting(s)

RE: future dates table in CDM refresh Table IIIA

I don't know, but the CDM folks responded right away last time I raised an issue in the PCORnet GitHub CDM Forum on github. https://github.com/CDMFORUM/CDM-ERRATA/issues/19 -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu]

gpc-dev 17 Apr agenda and meeting notes

What else for tomorrow? * ​18 Apr gpc-dev shared notes; scribe: MCW 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

RE: UW Madison's r004 approved

Declaring victory in mail to gpc-dev seems to be an established pattern for these. It works for me. Congrats! But if you looked for a relevant ticket in last week's call notes without finding one, you didn't look very hard :) *

RE: babel account request for investigators

@listserv.kumc.edu Cc: Dan Connolly Subject: babel account request for investigators Hi Dan, As part of the RFA for GPC Pilot projects, the attached documents were shared with the investigators. The resource guide document states that investigators can login to babel. What is the process for requesting babel

gpc-dev 11 Apr agenda/meeting notes (incl. next-d)

What else for tomorrow? * 11 Apr gpc-dev shared notes scribe: KUMC 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

RE: [gpc-informatics] #551: next-D labs for cohort selection: fasting glucose, HbA1c

11:37 AM To: <gpc-dev@listserv.kumc.edu> Cc: gkowal...@mcw.edu; Dan Connolly; Mei Liu; Taylor, Bradley; Bernard Black; Kho, Abel; Osinski, Kristen Subject: Re: [gpc-informatics] #551: next-D labs for cohort selection: fasting glucose, HbA1c Please, disregard Apr. 4th document on labs f

SNOW SHRINE query with SCILHS PCORNet ontology (#525)

Keith, how is the transition from the i2b2 demo ontology to the SCILHS ontology going? Any news from anybody else along these lines? https://informatics.gpcnetwork.org/trac/Project/ticket/525 -- Dan ___ Gpc-dev mailing list Gpc-dev@listserv.kumc.edu

RE: GPC-DEID discussion list started

bingo. Thanks. -- Dan From: Maren Wennberg Sent: Thursday, March 23, 2017 1:59 PM To: Dan Connolly; Kowalski, George; gpc-dev@listserv.kumc.edu Subject: RE: GPC-DEID discussion list started Hi Dan, Please try again. You should now be able to access

RE: GPC-DEID discussion list started

Maren, I just tried to access the archives but got prompted for a password. Please fix that. Our technical deliberations need to be open. -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on behalf of Kowalski, George [gkowal...@mcw.edu] Sent:

gpc-dev 21 Mar agenda and meeting notes

What else for tomorrow? * ​21 Mar gpc-dev shared notes scribe: MU 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

RE: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

.edu] Sent: Monday, March 20, 2017 10:09 AM To: gpc-dev@listserv.kumc.edu; Thomas Mish; campb...@unmc.edu; huhick...@nebraskamed.com; Dan Connolly; Russ Waitman Cc: jeff.kl...@mgh.harvard.edu Subject: RE: [gpc-informatics] #280: Medication ontology orgainzed by ingredient I have looked over these

gpc-dev 14 March agenda and meeting notes

What else for tomorrow? * ​14 Mar gpc-dev shared notes; scribe: IU 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

RE: CDM V3.X procedures (was: #583: SNOW SCILHS Lab Metadata Expansion)

12, 2017 5:02 PM To: campb...@unmc.edu; Dan Connolly Cc: gpc-dev@listserv.kumc.edu Subject: Re: [gpc-informatics] #583: SNOW SCILHS Lab Metadata Expansion #583: SNOW SCILHS Lab Metadata Expansion ---+--- Reporter: campbell

gpc-dev 7 Mar agenda and meeting notes

Anything else for tomorrow? * ​gpc-dev 7 Mar shared notes scribe: UNMC 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central Time.

RE: Share CDM Data Characterization (EDC) report with GPC customers such as Next-D

We're down to two bottle of beer on the wall: WISC, UTHSCSA. Pretty please? -- Dan From: Dan Connolly Sent: Monday, February 27, 2017 11:37 AM To: <gpc-dev@listserv.kumc.edu> Subject: RE: Share CDM Data Characterization (EDC) report with GPC cus

gpc-dev 28 Feb agenda and meeting notes

What else for tomorrow? * gpc-dev 28 Feb shared meeting notes; scribe: CMH current snapshot with proposed agenda:

RE: Ticket #570 - insurer question

Dean, suggestions? (you own #570) -- Dan From: Gpc-dev [gpc-dev-boun...@listserv.kumc.edu] on behalf of Gardner, Bret J [bret.gard...@unmc.edu] Sent: Wednesday, February 22, 2017 10:58 AM To: gpc-dev@listserv.kumc.edu Subject: Ticket #570 - insurer question I

RE: Share CDM Data Characterization (EDC) report with GPC customers such as Next-D

Thanks, Rita, for submitting CMH's EDC report. We're down to 3 remaining sites: UTHSCSA, WISC, MCRF. Are there any barriers I can remove? -- Dan From: Dan Connolly Sent: Tuesday, January 24, 2017 1:32 PM To: <gpc-dev@listserv.kumc.edu> Cc: Mei Liu S

gpc-dev 21 Feb agenda and meeting notes

What else for tomorrow? * gpc-dev 21 Feb shared meeting notes; scribe: UIOWA 1. Convene, take roll, review records and plan next meeting(s) * 11:00am Central

gpc-dev 14 Feb agenda and meeting notes

What else for tomorrow? * gpc-dev 14 Feb shared notes; scribe: MCW current snapshot with proposed agenda: 1. Convene, take roll, review records and plan next

RE: [SCILHS/scilhs-ontology] Medication ontology: SHRINE interop below ingredient level? (#52)

19> https://informatics.gpcnetwork.org/trac/Project/ticket/519 Lori's quote of me comes from https://github.com/SCILHS/scilhs-ontology/issues/52 -- Dan From: Phillips, Lori C. [lcphill...@partners.org] Sent: Tuesday, February 07, 2017 9:06 AM To: Dan Connolly Subject:

Integrating hospital billing: UHC ETL scripts

Brad, You and the MCW folks have expressed interest in using KUMC's UHC ETL scripts to integrate hospital billing. Please spend a few minutes poking around our documentation and / or code and reply with any questions that come to mind. https://informatics.kumc.edu/work/wiki/UHCSource

gpc-dev 7 Feb agenda and meeting notes

What else for tomorrow? * gpc-dev 7 Feb shared meeting notes; scribe: UTSW current snapshot with proposed agenda: 1. Convene, take roll, review records and plan next

SNOW SHRINE update?

Keith, thanks for the updates. If anyone has news they have not shared, please do so. * ticket:531#comment:5 31 Jan update on testing the MCRF node: "... the hub did not trust the spoke ..." *

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