Hello,

The connection tool doesn't care about zones. Though in a real pcb the signal 
is connected, it is not logically connected from the connection tool point of 
view.
I connect the trace to another trace or pin of the same net. Aftewards, I 
create the zones. The traces are then covered by the zone. Zones should be 
created after the whole pcb has been routed.

Pedro.

> Also, I have a problem connecting to internal planes.  I selected the
> proper layers for the via's and then selected the proper working layer
> and created/filled a zone.  It looks like there are connections, but
> it still shows a ratsnest to the ground and power connections and I
> have unconnected nets. I have deleted and gone through that process
> twice.

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