Re: [rkward-devel] Importing external plugins (rk.power)
Am Sonntag, 11. Januar 2015, 22:31:59 schrieb Thomas Friedrichsmeier: - Inheriting the version number from RKWard is a side-effect of rkwarddev writing about-info to the .pluginmap, instead of the plugin .xml. In general that is a good idea, too, unless - as in this case - no pluginmap is being generated. Is there a way to control this, already? as it happens, rk.plugin.component() already does this if about is an about node. rk.plugin.skeleton() just strips this down to the component name, so it definitely needs a new switch to change this. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- New Year. New Location. New Benefits. New Data Center in Ashburn, VA. GigeNET is offering a free month of service with a new server in Ashburn. Choose from 2 high performing configs, both with 100TB of bandwidth. Higher redundancy.Lower latency.Increased capacity.Completely compliant. http://p.sf.net/sfu/gigenet___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] rk.load.pluginmaps() broken?
hi, i was just testing the reworked plugin administration -- looks really great! i'm unsure whether this is related to a recent bug in rk.load.pluginmaps()? it doesn't seem to finish its work -- i see a plugin loaded with the function in the plugin configuration, its active checkbox is checked, but its state column remains empty. i have to manually - uncheck active - click apply - check active - click apply for the plugin to actually show a state of loaded and the dialog to appear in the menu. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Dive into the World of Parallel Programming! The Go Parallel Website, sponsored by Intel and developed in partnership with Slashdot Media, is your hub for all things parallel software development, from weekly thought leadership blogs to news, videos, case studies, tutorials and more. Take a look and join the conversation now. http://goparallel.sourceforge.net___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] indentation conventions
hi, so far we seem to use tabs for indentation of code. for kdelibs, 4 spaces instead of one tab is recommended: https://techbase.kde.org/Policies/Kdelibs_Coding_Style the same seems to apply for R code (though 2 spaces are also fine): http://cran.r-project.org/web/packages/rockchalk/vignettes/Rstyle.pdf is this something we should care about? at least, i'll try to clean up my R packages in the near future, to comply with this rule. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=164703151iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] import/export CSV
hi, thanks for the fast feedback. Am Dienstag, 2. Dezember 2014, 09:59:12 schrieb Thomas Friedrichsmeier: On Monday 01 December 2014 22:11:39 meik michalke wrote: here's a refined version, what do think of the restructured comments? definitely better, IMO. I'd suggest also putting all implicit paramteres on a single line of the comment, though, so the comment does not push the actual code out of sight. ok, fixed. Some more small items: - When specifying custom sep / dec, that generates sep=other/dec=other. oops... fixed. - Quote all values would more appropriately be labelled Quote all strings fixed. - Typo on varselector-label: varaible fixed. Again, I think it may make sense to move the format specs to the first tab (and file encoding somewhere else). Sure, that makes for a rather largish dialog, but I think it's still just acceptable. shuffling around elements is no problem, i'll try something. however: - Set the labels of the inputs for custom dec/sep to (these are definitely expendable, IMO) - Set the label of the file name selector to . Probably self-explanatory. that could actually help, if i manage to get rkwarddev to write empty strings into its objects... currently, it leaves the labels out and RKWard auto-fills them. generally: should i simply already add the XML and JS file to git already? if so, should i also put the rkwarddev script somewhere there, or would you like to have its results, only? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] import/export CSV
hi, Am Montag, 1. Dezember 2014, 11:12:48 schrieb Thomas Friedrichsmeier: See my last mail. I think defaulting to CSV (_not_ CVS2!) would be sensible. ok, i'm all for it. Assorted comments: - Why is the append option controlled by the predefined format? you just wrote it yourself: append, col.names, sep, dec and qmethod cannot be altered. ;-) that option and the column names are the deactivated settings i was referring to, for write.csv() and write.csv2(). they are not all on the same tab -- i tried to make the dialog as similar to the import plugin as possible, but there are quite some differences. - Uncommenting arguments, that do not apply, is a nifty idea, but does come with some drawbacks: - Bloats the generated code - Seems to suggest that these _could_ be customized for write.csv(2). However, the R help says: append, col.names, sep, dec and qmethod cannot be altered. I'd suggest stripping these. sure, this is only an idea. but let me explain how it came to this: firstly, i was thinking about people who want to learn R; there should also appear an explaining comment above the write.csv() call explaining that the commented options cannot be changed here (btw, if you try, write.csv() throws a warning saying the same). secondly, the commented options show the value that they're set to internally; for instance, col.names depends on the setting of row.names. @aaron: what do you think would be most useful? the generated code currently reads: # some options can't be changed with write.csv() # they have been commented out to show the values they are set to write.csv( x=, file=, #append=FALSE, #sep=,, eol=\n, na=NA, #dec=., row.names=TRUE, #col.names=NA, #qmethod=double, fileEncoding= ) the stripped alternative would be: write.csv( x=, file=, eol=\n, na=NA, row.names=TRUE, fileEncoding= ) the R code currently also includes all defaults. if we want to strip it down to the absolutely necessary arguments only, it would result in just this: write.csv( x=, file= ) - Remove the data.frame-warning (see my last mail). with pleasure. - For encoding specification, import_spss and import_stata share some code (currently in the form of a snippet. It might make sense to turn this into an embeddable plugin, and use it. i actually included that snipped first, but it added another full tab and had a checkbox for converting strings which i didn't find the best wording here. so i copied the dropdown menu -- and added the checked (default) option, since write.table() defaults to 'fileEncoding='. having something to embed would be great, but i still didn't really get how to write an embeddable plugin ;-) viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] import/export CSV
hi, here's a refined version, what do think of the restructured comments? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. ExportTableCSVfiles_0.01-0.tar.gz Description: application/compressed-tar -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] import/export CSV
hi, as promised, i completely re-wrote the export tabular data dialog. it's attached[*] as a pre-built plugin package so you can check it out (it also includes the rkwarddev script used to build it). it defaults to custom file format at the moment -- CSV or CSV2 could be better choices, but this deactivates some elements and could confuse some people, couldn't it? i have a question regarding the current plugin: what plugin is referred to by use the plugin 'write' for mere variables? is it Write vector / matrix? generally, can i somehow refer to a plugin so that my dialog fetches its current name (dialog label) dynamically? i guess not -- would be cool to have it as a direct link, shown as the path from its root menu. and one questions regarding the import CSV plugin: what does this logic statement do? connect client=commentchar.enabled governor=quickNone / viele grüße :: m.eik [*] i am generally not a friend of attachments, but this one is so tiny that i hope you're ok with it ;-) -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf ExportTableCSVfiles_0.01-0.tar.gz Description: application/compressed-tar signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] [rkward-cvs] [rkward] rkward: erm, ok, here are the missing files to the last commit...
hi, Am Freitag, 28. November 2014, 08:04:57 schrieb Thomas Friedrichsmeier: On Friday 28 November 2014 01:07:40 meik michalke wrote: are you sure? no. Except perhaps no the part about shipping both mime-types in one file. good point -- i did that, and i also renamed the file to vnd.rkward.r.xml, which makes it a vendor-specific MIME type declaration. that makes it possible for us to define that MIME type without colliding with other packages doing the same. the original XML file is now being installed to /usr/share/mime/packages, but XDG does also automatically generate /usr/share/mime/text/r.xml and /usr/share/mime/application/rdata.xml from it. in effect it's the same result. I'm still somewhat worried about future clashes. _If_ R ever decides to start shipping these mime-types, RKWard is going to get the blame for conflicting names, I'm afraid. i hope this is solved for good now. the hint to libreoffice.xml was useful and led me to the vnd.* files. i'll try and test if this and the protocol handler also works on OS X. can you check that on windows? and if you click on an *.RData file, you're asked *once* whether the workspace should be saved -- after that, the current worspace is just silently replaced with the content of any other RData file you click. I changed that a bit, and yes, it might be buggy, but I think you should find, the behavior is now: - If a workspace has just been loaded, and not been touched, don't ask whether to save it before quitting / replacing it. - If you touch some object in between, you should be prompted, again. right, i missed that part -- i was just baffled that rkward switched from one workspace to another without asking, and i was wondering what that would do to one's data if you accidentally clicked on a *.RData file... but that's a good solution now. - Now as to why you're prompted for the initial - probably empty - workspace: It's that .Random.seed that gets created some time in the middle of starting up. Did not think up a nice way to cope with that, yet. actually, that is something that has always annoyed me a bit: i start RKWard and want to *open* a previous workspace, but the first thing i get is a question whether to *save* the workspace. good thing if that was gone. do we have to care for that single .Random.seed object when one wants to open another workspace anyway? single objects can't be added to the workspace this way either. there should probably be two methods for handling *.RData files: complete workspace or individual R objects, True. KDE knows this as service menus, i can try to write an according *.desktop file as well. then you'd have to actively open the file via right click. that would need another option for the rkward binary. alternatively, RKWard could ask you how to deal with the input: replace current workspace or add all objects to the current one. do you know whether there's a difference between *.RData files containing saved workspaces and saved R objects? if there was, we could add a magic section to the MIME type, which would cause the first bits of a file to be read to get its type. and you should always be asked before your workspace is wiped. Really? no, its fine as it is (except maybe for the initial workspace). viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] file formats [was: rkward: erm, ok, here are the missing files to the last commit...]
hi, Am Freitag, 28. November 2014, 08:04:57 schrieb Thomas Friedrichsmeier: btw. there's some other issues: RKWard doesn't recognise *.rda files yet; Ok, will add. i'd vote for RKWard being able to edit all text files it is using, i.e., also adding *.xml and *.js to the list. plugin development would benefit from it, at least i'd use kate anyway. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] run again link outside RKWard
hi, Am Freitag, 21. November 2014, 17:25:16 schrieb Thomas Friedrichsmeier: On Wednesday 19 November 2014 11:06:21 meik michalke wrote: i was curious if it was possible to get the run again links work also outside of RKWard [...] 2. Use rkward --reuse myurl to open myurl in an existing RKWard instance (if any). awesome, works just great! i have a working rkward.protocol for that and will add it to git once i found the correct way to also add it to the installation process. where would you like the .protocol file best in the source tree? my guess would be the location of the .desktop file. i'm now trying to get an entry in the context menu of KDE file managers, so you can open any R script or workspace image with a right click. this should also make it easy to enable RKWard to offer this in its file browser dialog. proof of concept first, then we can refine it. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] [rkward-cvs] [rkward] rkward: erm, ok, here are the missing files to the last commit...
hi, Am Donnerstag, 27. November 2014, 19:43:58 schrieb Thomas Friedrichsmeier: On Thursday 27 November 2014 15:44:45 m. eik michalke wrote: A +12 -0rkward/r.xml A +13 -0rkward/rdata.xml these work nicely for me. However, I think they should be merged into one mime file, and that should be called rkward.xml . So there's no significant risk that this could clash (now or later) with (R-) mime types declared from other sides. are you sure? i mean, these file types are not really RKWard files, but ordinary R files, so i'd say their MIME type can only be R or R data, respectively. the connection between these MIME types and applications is defined in *.desktop files instead, where one MIME type can have multiple associations. i'd find it a bit confusing if there were such pseudo-MIME types like, say, firefox.xml, chrome.xml and rekonq.xml, all for *.html files. of course it would be better to have these global MIME types rather defined by either R or KDE itself, so RKWard can just assume they're there. but from what i found on the net, this has not been accomplished for many many years. there still doesn't seem to be any package defining a MIME type for R files yet, at least in the realm of ubuntu and CRAN packages. btw. there's some other issues: RKWard doesn't recognise *.rda files yet; and if you click on an *.RData file, you're asked *once* whether the workspace should be saved -- after that, the current worspace is just silently replaced with the content of any other RData file you click. single objects can't be added to the workspace this way either. there should probably be two methods for handling *.RData files: complete workspace or individual R objects, and you should always be asked before your workspace is wiped. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] feedback
Am Sonntag, 23. November 2014, 21:14:16 schrieb Aaron Batty: K, I just tested. It turns out that it works okay in Windows, so I will now go yell at all those students who told me it didn't. It does not, however, work on the Mac. Here is what happens when trying to drag something out of the output: http://aaronbatty.net/media/RKWardDrag.png just to make sure: do you know that you can export plots in various formats directly from the graphics window? this was *not* possible in previeous versions of RKWard on mac, only after thomas added the RK() device. in most plot dialogs, you can use the preview checkbox to get the graphics device, and once it fits your needs, click device - export. you can then save your plot wherever you want and don't have to search hidden folders for that, and you're free to chose from various formats (PNG, PDF, SVG, EPS, even TikZ...). viele grüßen :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] feedback
hi, as written earlier, today i gave a presentation at a department for statistics. they are considering to switch from SPSS to R (and have already done so for the master degree), and RKWard might become their tool of choice for the bachelor curriculum, where GUI is a bit more important than IDE. here's some feedback from the presentation, reduced to the parts where they'd welcome some improvements: - in the workspace browser, show all environments should not be checked by default, so you only see your objects in the worksapce. actually, unchecking that box is one of my first actions after a new installation as well ;-) - in the code veiw, the whole printout section was seen as problematic (at least in this context), as it wasn't really clear to anyone that this is just what makes the RKWard output. i remember i asked for some options to configure this part myself a while ago. no idea how to deal with it. perhaps a more explaining comment would help, like the calculation is done at this point; the following code generates the output, or so. - the regression dialog should be enhanced. we were recommended to look at RCmdr's regression module for something they'd love to see in RKWard. - in general, they wished for a more obvious workflow regarding what can further be done with results from some analysis (say, you have just estimated Rasch parameters, but no clue that there's a particular plot option for that in another branch of the menu). this wish is a bit harder to fulfil, of course, but i had two ideas to enhance the situation: the first approach would use the run again-link feature to recommend common follow-up analysis steps in the HTML output, like pairwise t-tests after ANOVA or special plots. however, this would limit the availability of recommendations to what the original plugin author could think of, and we don't even know what happened to an object after the dialog was closed. the second approach would be to implement a new entry in the workspace browser's context menu for objects, say next steps. depending on the object class, it would list copies of the main menu structure (like data, analysis, plots) which are particularly useful for this object class. the mapping for this would have to be defined somewhere, perhaps in the dialog XML code, or more centralised in the pluginmap. this way, the recommendation would also be available for objects made with other plugins and even scripts. where possible, the regarding object could be pre- filled into the appropriate dialog field. it could be limited to what you'd usually want to do now, if that can be figured out... overall i think they really liked RKWard already, and highlighted stuff like the possibility for pluginmaps to be disabled, especially in a teaching context. well, and there seems to be a problem with our bundle and OS X yosemite :-/ but one problem can be marked as done: - the factor analysis plugin should gain support for the MAP criterion, so i wanted to get started with a dialog for psych::VSS() some time soon. i just saw now that i already did this :-D i must check if that version has not been released yet... viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] RKWard Git repos up for testing
hi, Am Dienstag, 11. November 2014, 09:50:02 schrieb Thomas Friedrichsmeier: On Monday 10 November 2014 21:23:24 meik michalke wrote: Am Montag, 10. November 2014, 19:37:09 schrieb Thomas Friedrichsmeier: g...@git.kde.org:scratch/tfry/rkward-svn-import.git how would i get my pubkey up there? shall i send it to you? As Nicolás wrote, you manage that through identity.kde.org, and you also need to apply to be added to the developer group. yes, will do. That said, the repo is not ready for pushing to it i didn't want to push yet, just wanted to clone the repo and couldn't because my key was missing. but that will be solvend soon. Well that's mostly a separate discussion, though. I have now added a new organization on github: rkward-community. Tell me your account names, there, and I'll add you, then move over the external plugins repo. they call me unDocUMeantIt which brings me to: how/where will we host the package repository (http://rkward.sourceforge.net/R/)? Well, good question. I guess we'll have to ask the KDE sysadmins about this (could be http://rkward.kde.org/R/, somewhere on downloads.kde.org, or pretty much anything else. In fact, why not CRAN? Would the plugin packages fail the CRAN checks for containing inst, only?). hm, i think CRAN is the wrong place for these packages. sooner or later, it will definitely result in pointless discussions about new rules in the repo policies and we would have to rebuild and resubmit everything each time. for instance, a while ago it was decided that on CRAN it is forbidden(!) to ship your source code tarball with a copy of the GPL, because they have it on the homepage; and they forced me to take one package off CRAN again because it uses an unexported function that the R development core team recommends(!) to use. so even if our packages would be considered ok today, that might no longer be the case tomorrow. at the same time there's little to gain -- our packages are only useful with RKWard anyway, so it's not so much an obstacle to have them in a repo that is almost only known to the application. i'd really prefer to do that ourselves. all we need is a little webspace. Until we have a good long term plan, I'd say not to change this, though. ok, i was just curious. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Comprehensive Server Monitoring with Site24x7. Monitor 10 servers for $9/Month. Get alerted through email, SMS, voice calls or mobile push notifications. Take corrective actions from your mobile device. http://pubads.g.doubleclick.net/gampad/clk?id=154624111iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] RKWard Git repos up for testing
hi thomas, Am Montag, 10. November 2014, 19:37:09 schrieb Thomas Friedrichsmeier: g...@git.kde.org:scratch/tfry/rkward-svn-import.git how would i get my pubkey up there? shall i send it to you? The second repository is for external plugins. It is much easier, since this only ever was a single branch, and never had any tags. It's temporary place is https://github.com/tfry-git/rkward-external-plugins . Questions regarding this one: - Where exactly should this end up? I think it should be group-owned, somehow. i could simply fork it and send you pull requests all the time ;-) - Meik, do you recall, whether there is anything left in rk.subset that we did not merge into the main distribution? Can this be deleted? it should be completely implemented by now, and i believe the (implemented) code was already altered after that. however, keeping the plugin there might be an option for people who don't want to upgrade to the most recent version of RKWard just yet. but in general, i guess it can be removed. which brings me to: how/where will we host the package repository (http://rkward.sourceforge.net/R/)? - Also, Meik, could you add some README to the stuff directory? This is supposed to be the bikeshed for stuff that is not really something, but should not be thrown away, either? yeah, although thinking about it... it can also just be discarded, i don't know if it's of any use for anyone besides me. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Comprehensive Server Monitoring with Site24x7. Monitor 10 servers for $9/Month. Get alerted through email, SMS, voice calls or mobile push notifications. Take corrective actions from your mobile device. http://pubads.g.doubleclick.net/gampad/clk?id=154624111iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] select feature for data editor
hi, since one of my colleagues started working with RKWard, he's a constant stream of inspiration ;-) he noticed it is only possible to select data in the data editor by single row/column or complete blocks of rows/columns. he would expect that if you press ctrl while selecting rows/columns, that you could toggle their select state individually. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] plugin installation [was: power analysis plugin]
hi, Am Dienstag, 14. Oktober 2014, 21:25:28 schrieb Thomas Friedrichsmeier: are there R functions yet to enable/disable plugins? you know, if there were, in combination with rk.list.plugins() i could simply write my own plugin for that control. a function which lists all meta (like about, dependencies and info on the menu structure) information on plugins would also be great, because the name alone doesn't explain so much. interesting idea. But no, rk.list.plugins() is the only piece of that picture, that exists, so far. Let's keep it in mind for 0.6.3. (Although I'll start by working on plugin i18n; that's long overdue at any rate). And when I say let's keep it in mind, I mean: Do remind me! here's the reminder :-D i will present RKWard at the university of münchen next month, and one part where i myself always think this is way too complicated is plugin installation. it's not so much the installatin, but finding the plugins that can be installed, or even find out that there is such a thing like plugins in the first place. if you don't know you should try the regular expression *rk.* in the package dialog, then you'll never stumble over our extensions. there's several possibilities for enhancements: - a checkbox show RKWard plugins only in the package installation tab, like below the regular expression input field. if checked, should only show packages that have enhances: rkward set pro: should be easy to implement, small change to the current inerface con: you still need to know exactly where to look - a tab of its own, install/update RKWard plugins next to the one for R packages. basically same functionality. pro: maybe a bit more obvious con: a bit of interface redundancy - a dedicated menu entry manage RKWard plugins, which does not only list rkward-enhacning packages for installation/updates/removal, but could also become the new home of the plugin administration that i s now in RKWards global configurtion, in a separate tab now pro: you can't miss it and a lot of people will probably just try what it does con: needs the most work. the third option could probably integrade installation/upgrade/removal and the activation in one interface. with the R functions i suggested above, this thing could also be started as an external plugin. viele grüße :: m.eik PS: i'd like to try and work a bit on the table export plugin someday, and add the CSV/CSV2/etc. default settings to it, like we already have in the corresponding import plugin. is that ok? -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Call for feedback: Translating RKWard plugins
hi, Am Montag, 27. Oktober 2014, 13:11:40 schrieb Thomas Friedrichsmeier: please take a look at http://rkward.sourceforge.net/temp/rkward__analysis.pot so, is that basically the desired format we'd like to have for external plugins as well? i could start something like rk.i18n.scan(), then. apart from the .pot file and the new arguments to XML elements, what parts else will need changes? not entirely sure how to do it yet. but things will fall in place. 2) The framework for plugin translations allows us to split translations into pretty much as many message catalogs as we like. For external plugins, this will always have to be small catalogs, covering only the plugin(s) in the package. yes, that would be my guess. from an rkwarddev perspective, the best way would be to split by .pluginmap here. - In some - rare - cases, you may want to exclude a label from translation. In this case, write option value=mood no18n_label=Mood, if that is to signify Mood's two sample test, for instance, rather than the state of mind. Note the no18n_label=XYZ, instead of label=XYZ. so label is omitted when no18n_ is used? is it no18n_ or noi18n_? i'm thinking about the best way to get the new arguments into the rkwarddev functions; i think the relevant functions will get a new i18n argument, which takes a list with named elements context and comment, and if it is simply set to FALSE, label will be set to no18n_label or noi18n_label, whatever it is. (*) Meik: I can see you worrying about installing translations for external plugins. No need to worry too much: Plugin translations are installed to a path relative to the other plugin files. So they can simply be packed into the inst-directory. will we keep using the folder structure introduced to get my first clumsy approach going (i.e., the po directory)? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Call for feedback: Translating RKWard plugins
hi, Am Montag, 27. Oktober 2014, 16:58:38 schrieb Thomas Friedrichsmeier: On Monday 27 October 2014 15:07:42 meik michalke wrote: so, is that basically the desired format we'd like to have for external plugins as well? yes. It is what translation tools like lokalize work with (try opening the file, there). yes, i was aware of that, toyed around with kbabel a long time ago... ;-) i could start something like rk.i18n.scan(), then. I'd suggest to wait a little while longer, until we have some feedback from actual experienced translators. Then, basically, you could take extract_plugin_messages.py as a template. i'll sure have a good look then. getting the desired attributes or child nodes out of the code is probably not so difficult, as both rk.JS.scan() and rk.rkh.scan() do exactly that already, only for different tasks. dealing with the JavaScript stuff later will be much more difficult, i guess. Now the .pot syntax does not look too complex, so it might be possible to do this in one pass (and without the xgettext requirement), but I was not sure enough of exactly what tricks xgettext might apply e.g. to special characters. i think i will definitely try to write my own .pot generating functions; looks like it's doable. the only thing i couldn't clearly find out yet is how i have to deal with whitepsace used for code formatting. if every tab must exactly match the input file, then this could be problematic, because you can't guess that from the XiMpLe objects -- they are only added when the full document tree is pasted, and that can be changed via the indent.by argument. this is only relevant to a limited number of strings (like values of text nodes), though. Of course as a quick-and-dirty shortcut to getting rkwarddev prepared, you could simply call python extract_plugin_messages.py ... from R... sure, that's a fallback. - we will need commands to mark up translatable strings in the .js-files (including scripted plugin logic). I simply haven't worried about that, yet. would adding a pseudo function like _() be enough for gettext to get those strings out? here's a JS implementation of gettext: http://code.google.com/p/gettext-js/source/browse/trunk/js/gettext.js it uses the function _() to denote translatable strings, if i get it correctly. - .pluginmaps (in particular external ones) will need to specify an id / name for the message catalog to use, and - optionally - a location where to find it. Look at analysis.pluginmap, which currently specifies document ... po_id=analysis. ok, that will be amongst the first things added to rkwarddev. yes, that would be my guess. from an rkwarddev perspective, the best way would be to split by .pluginmap here. Yes, probably, and you can simply do that. In fact, you can split pretty much any way you like, as the po_id attribute is read on any xml file, not just .pluginmaps. Not that I expect that to make much sense, though. i'll start with implementing it for pluginmaps. is there a name scheme? e.g., the rkward__ with two underscores have special meaning? so label is omitted when no18n_ is used? is it no18n_ or noi18n_? The other way around: If a label attribute is not found, RKWard will look for a noi18n_label attribute, next, and this won't be fed through translation. Works the same for title, BTW, on those elements that have that attribute. so it's noi18n_title there? good to know. i18n for internationalization, which is a word with 18 characters between i and n. yeah, i knew that ;-) 1. Extract messages to rkward__POID.pot 2. Translate that, save as rkward__POID.de.po 3. msgfmt rkward__POID.de.po -o rkward__POID.mo 4. mv rkward__POID.mo PLUGINDIR/po/de/LC_MESSAGES/ where PLUGINDIR/po is the same directory with rkward__POID.pot, right? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] [rkward-cvs] SF.net SVN: rkward-code:[4944] trunk/rkward/scripts
hi thomas, Am Freitag, 24. Oktober 2014, 08:53:26 schrieb Thomas Friedrichsmeier: On Friday 24 October 2014 01:49:31 meik michalke wrote: Am Donnerstag, 23. Oktober 2014, 20:48:46 schrieb t...@users.sf.net: Add - buggy, incomplete - python script to extract messages from pluginmap, and all referenced .xml and .rkh files. why not use XiMpLe for this and do it inside R? that was my first idea, too. My reasons to do it in python, anyway: - slightly easier to write - can be included in the automatically running scripts on KDE's repo, easily - in order to actually prepare the .pot files, you need additional tools, anyway (xgettext), so there is no R-only solution in the first place. (Although that may be possible to do, too). i see; i was just asking because i will most likely have to write something like that for rkwarddev anyway, and being able to parse our plugins and extract whatever piece we want was one of the main reasons for me to start with the XiMpLe package. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] resize code window
hi, when you open the R console, you can manually resize it's height. can this be added to the code window part in plugin dialogs as well? right now, when i want to see more of the code, the whole dialog window is being resized and the code part only in proportion to the overall size. that's quite annoying and certainly a waste of screen space. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Endless errors starting up org.freedesktop.dbus-system on OSX
hi aaron, Am Mittwoch, 22. Oktober 2014, 09:59:22 schrieb Aaron Batty: I also had a chance to check on a student's Mac on Friday. It has only ever had one installation of RKWard. The behavior was there as well, so it's not linked to multiple installs. ok, so we can rule that one out. for the record, i don't see these errors on the mac i build the packages on: i called tail -f /private/var/log/system.log and launched RKWard. every 10 seconds, i get a bunch of messages in endless loop, but they are not related to dbus but OSXvnc-server/VineServer. here some observations i made during the last round of builds -- after its installation, the dbus port states: snip # Startup items have been generated that will aid in # starting dbus with launchd. They are disabled # by default. Execute the following commands to start them, # and to cause them to launch at startup: # # sudo launchctl load -w /Library/LaunchDaemons/org.freedesktop.dbus- system.plist # launchctl load -w /Library/LaunchAgents/org.freedesktop.dbus-session.plist /snip in our bundle both is done, the system bus is launched by the postinstall script, the session bus by the application itself. after the RKWard build, i was told this: snip Don't forget that dbus needs to be started as the local user (not with sudo) before any KDE programs will launch. To start it run the following command: launchctl load -w /Library/LaunchAgents/org.freedesktop.dbus-session.plist /snip from this we can assume that the session bus is not to be started as root, so the instructions on https://community.kde.org/Mac are outdated (and we're doing it right). now, this is a portion from man launchctl: man Note that per-user configuration files (LaunchAgents) must be owned by the user loading them. All system-wide daemons (LaunchDaemons) must be owned by root. Configuration files must not be group- or world-writable. /man hm, the way i understand this, the file org.freedesktop.dbus-system.plist must then be owned by root, and the file org.freedesktop.dbus-session.plist must be owned by the user loading them. on the build mac it's: snip -rw-r--r-- 1 root wheel 459 20 Okt 10:25 /opt/rkward/Library/LaunchDaemons/org.freedesktop.dbus-system.plist -rw-r--r-- 1 root wheel 734 20 Okt 10:25 /opt/rkward/Library/LaunchAgents/org.freedesktop.dbus-session.plist /snip i.e., both files are owned by root and group wheel. my user is not a member of that group, so judging from the man page this shouldn't even work, should it? on the other hand, i find it hard to believe that a system-wide config file is supposed to be owned by one ordinary user and all other users can't launch it. can you make sense of this? after all, wrong permissions could be the actual problem here. one other possibility might be ~/Library/Preferences/KDE. according to https://community.kde.org/Mac it must be owned by the user, allthough i was under the impression that this is automatically the case when it is constructed by the first app. however, it might be interesting to have a look on the affected systems , e.g. ls -ld ~/Library/Preferences/KDE: snip drwxr-xr-x 6 meik staff204 29 Nov 2011 KDE /snip what do you see? does sudo chown -R $USER ~/Library/Preferences/KDE make the messages go away? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Help with rkward .js code
hi peter,
not sure whether this has been answered yet...
Am Donnerstag, 21. August 2014, 10:12:28 schrieb Peter Mayer:
In the second line, in particular, I don't know how to express the
'tilde' in rk format. Here's one version of what I've tried, all of
which cause a parsing error:
echo (' lml - lm(' + y + \~\ + x +');\n');
try
echo (' lml - lm(' + y + '~' + x +');\n');
instead.
I feel that there's something very elementary that I've missed, but I
don't know what it is! Is there a syntax reference that I can consult?
when you start RKWard (or hit F1), there's a welcome to RKWard page. scroll
down to the bottom and click the Introduction to Writing Plugins for RKWard
link.
viele grüße :: m.eik
--
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institut fur experimentelle psychologie
abt. fur diagnostik und differentielle psychologie
heinrich-heine-universitat d-40204 dusseldorf
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Re: [rkward-devel] [rkward-cvs] SF.net SVN: rkward-code:[4944] trunk/rkward/scripts
Am Donnerstag, 23. Oktober 2014, 20:48:46 schrieb t...@users.sf.net: Add - buggy, incomplete - python script to extract messages from pluginmap, and all referenced .xml and .rkh files. why not use XiMpLe for this and do it inside R? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] option in valueslot?
hi, the plugin docs state for option that it can be a child node of valueslot, but the notes on valueslot refer to it as behaving like varslot. i assume the latter is correct? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Comprehensive Server Monitoring with Site24x7. Monitor 10 servers for $9/Month. Get alerted through email, SMS, voice calls or mobile push notifications. Take corrective actions from your mobile device. http://p.sf.net/sfu/Zoho___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Endless errors starting up org.freedesktop.dbus-system on OSX
hi, Am Donnerstag, 16. Oktober 2014, 11:30:26 schrieb Thomas Friedrichsmeier: 3. /Library/LaunchDaemons/org.freedesktop.dbus-system.plist really just fires up /opt/rkward/bin/dbus-daemon --system --nofork 4. Trying to run that, as a regular user, manually gives: Failed to start message bus: Failed to bind socket /opt/rkward/var/run/dbus/system_bus_socket: Permission denied 5. The directory in question is owned by user messagebus, so surely this won't work. this is the *system* bus which is supposed to be started by calling sudo launchctl load -w /Library/LaunchDaemons/org.freedesktop.dbus- system.plist *once* after KDE was installed. 6. Checking ps ax | grep dbus reveals that a dbus-daemon is running, though, with user messagebus. I _guess_ this was started by sudo launchctl -w /Library/LaunchDaemons/org.freedesktop.dbus-system.plist yes. so far, so good. Question: Did you run this, or a similar command on the Macs where RKWard is installed? Our troubleshooting instructions mention that this _might_ be needed, but no idea, whether that is the normal case. usually, this should already be handled by the postinstall scripts in the bundle. Question: Do you see a dbus-daemon process in your process list? 7. On startup, RKWard itself calls launchclt -w /opt/rkward/Library/LaunchAgents/org.freedesktop.dbus- session.plist 8. I suppose this connects to the system dbus-daemon. yes, this is the *session* bus. according to https://community.kde.org/Mac it should also be launched with sudo... but that portion hasn't changed in 2 years, so let's assume this is not the reason. @aaron: did you already see this happening before september 2014? if not: @thomas: can this be related to one of these commits: - 4802 - 4803 - 4822 - 4834 Well, in essence, this looks to me like something is trying to load /Library/LaunchDaemons/org.freedesktop.dbus-system.plist as a regular user. This tries starting up the daemon, fails, tries again... another idea: is it possible that installing the RKWard bundle several times (upgrades) and therefore running the postinstall script several time somehow messes this up? i still don't have the best understanding of how these mac bundle packages actually work, as apple used so many different formats and the documentation is... sparse. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Comprehensive Server Monitoring with Site24x7. Monitor 10 servers for $9/Month. Get alerted through email, SMS, voice calls or mobile push notifications. Take corrective actions from your mobile device. http://p.sf.net/sfu/Zoho___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] [rkward-cvs] SF.net SVN: rkward-code:[4897] trunk/rkward/packages/rkwarddev
Am Montag, 13. Oktober 2014, 09:18:57 schrieb Thomas Friedrichsmeier: not sure, what the part about the optionset refers to. If you want me to take a look, somewhere, let me know (it _is_ a rather non-trivial control...). speaking of non-trivial... can you hint me to to some documentation of how to get all columns out of one row of the optionset? i find it hard to understand from the existing examples, but i get the idea it has to to with for loops. i would like to implement some kind of prototypic helper function in rkwarddev. unless it turns out to be impossible ;-) viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Comprehensive Server Monitoring with Site24x7. Monitor 10 servers for $9/Month. Get alerted through email, SMS, voice calls or mobile push notifications. Take corrective actions from your mobile device. http://p.sf.net/sfu/Zoho___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] power analysis plugin
hi, Am Montag, 6. Oktober 2014, 20:28:45 schrieb Thomas Friedrichsmeier: - Providing better control over which plugins are active. I'm still not convinced, the level of individual plugins is (typically) the right granularity of control, but in fact, control should be more fine-grained than the current official pluginmaps, and esp. more fine-grained than simply using all.pluginmap, by default. are there R functions yet to enable/disable plugins? you know, if there were, in combination with rk.list.plugins() i could simply write my own plugin for that control. a function which lists all meta (like about, dependencies and info on the menu structure) information on plugins would also be great, because the name alone doesn't explain so much. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Comprehensive Server Monitoring with Site24x7. Monitor 10 servers for $9/Month. Get alerted through email, SMS, voice calls or mobile push notifications. Take corrective actions from your mobile device. http://p.sf.net/sfu/Zoho___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] [rkward-cvs] SF.net SVN: rkward-code:[4897] trunk/rkward/packages/rkwarddev
morning, Am Montag, 13. Oktober 2014, 09:18:57 schrieb Thomas Friedrichsmeier: rkwarddev: enhanced the R code shown by the skeleton dialog to be a better start for your own rkwarddev scripts (optionset still refuses to work, btw...) not sure, what the part about the optionset refers to. you looked in the right place. Anyway, I looked at the skeleton dialog. The optionset there seemed to do exactly what it is meant to do. ahhh, ok, now i get it... you have to *first* add an item and *then* write the text. intuitively, i always tried the other way around. i thought it didn't work becuase i never saw any items appear. can this be made clearer somehow? However, for a very simple input like this, a more elegant alternative may be a matrix mode=string allow_user_resize_rows=true allow_user_resize_columns=false. ok, will try it when i get to it. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://p.sf.net/sfu/Zoho___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] power analysis plugin
hi, Am Samstag, 11. Oktober 2014, 14:46:39 schrieb Thomas Friedrichsmeier: Well, when I wanted to make that experiment, I found that rkwarddev does not yet handle ids on radio-options. And then I found out, that the fact that radio-options can be disabled, dynamically, was not really documented, so far. (See Import Text / CSV Data-Plugin for an example usage). I have fixed the documentation. Could you add this to rk.XML.option()? well, in fact there is no rk.XML.option() yet ;-) all options are directly defined by rk.XML.radio() as a list. but if one needs the possibility of getting an ID from an option, adding rk.XML.option() seems to be inevitable. i don't se another way to clearly specify which option you mean, except directly naming the ID yourself. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://p.sf.net/sfu/Zoho___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] power analysis plugin
hi there, Am Samstag, 11. Oktober 2014, 17:50:57 schrieb Thomas Friedrichsmeier: On Saturday 11 October 2014 17:44:33 Thomas Friedrichsmeier wrote: Thus, perhaps, naming an id manually, is the way to go. I.e rk.XML.radio() could accept options like this: ok, I was too slow... sorry ;-) in rkwarddev you're used to feeding your XML objects to other functions to get their ID, so you will expect this to be possible here as well. the problem is that using the radio-node that way leaves the problem of identifying one of the options. so i thought the clearest way of doing it would be to make the option an object of its own. Well, perhaps if you can make it so that rk.XML.radio() can accept a mixed list like this? list (First option=c (val=1), Second option=c (val=2, chk=TRUE), rk.XML.option (Optional option, val=3, id.name=three)) that exactly is the plan. for re-use of the ID later on (e.g., in the logic section), you should also store it in an object: list ( First option=c (val=1), Second option=c (val=2, chk=TRUE), option3 - rk.XML.option (Optional option, val=3, id.name=three) ) the last remaining problem here is that you cannot access the node by its ID alone, you still need the radio node ID as well (rID.oID). i'm not sure yet how to solve this elegantly (it's similar to identification in optionsets). [maybe using an environment like for the help text is an idea here... as long as IDs are unique, finding the parent ID of an option ID shouldn't be so hard] i also want to write a check for the chk argument, so only one option can have it set to TRUE. i've also seen that i repeatedly wrote several lines of code to check for the kind of node which is nested in other nodes, that calls for a dedicated function and a central list of valid child nodes as well. The point would be to make sure that options that don't need an id don't get one, automatically. yes, and in contrast to other functions, where the default is id.name=auto, in rk.XML.option() the default is already set to id.name=NULL: even if you want an auto-ID, you have to manually call for it. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://p.sf.net/sfu/Zoho___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] power analysis plugin
hi thomas, Am Dienstag, 7. Oktober 2014, 13:43:33 schrieb Thomas Friedrichsmeier: - For the two sample tests, when estimating the size of one of the samples, why not always make it the second sample (i.e. first sample size provided)? fixed (in the script). - Syntax error for estimating sample size in different sample sizes proportion test. fixed (in the script). not the first time, all those commas are a mess :-D - In some cases, you get the not-so-helpful error message: Error in uniroot(function(n2) eval(p.body) - power, c(2 + 1e-10, 1e+07)) : f() values at end points not of opposite sign fixed (in the script). applied you suggested message, seems to work. - For GLM, would it make sense to allow to specify number of parameters to estimate, and sample size (N), instead of numerator / denominator df? i went for the wording used by ?pwr.f2.test, but i admit it sounds a bit scary ;-) - In the generated printout() code, things might get slightly simpler, if you print the header earlier: ok, partly changed it already in the script. will look at it later. - That said, I wonder, whether the following printout would be good enough (after the rk.header()): rk.print.literal (capture.output (print (x))) (we could add a new function rk.print.simple(x) for this kind of output. It would probably make sense in other places, too). to me it looks a bit more consistent with the RKWard output you're used to now. it partly emulates what print.power.htest() does, but with rk.* functions. for copypaste scenarios, i'd prefer that table. btw, if you have text for the help file, i would like to try to put it in the rkwarddev script, to test a new possibility to generate .rkh files i implemented just yesterday. it stores text for elements by ID in an environement, and when rk.plugin.component() or rk.plugin.skeleton() use the scan option for setting nodes, that text is automatically filled in. to get the text into the environment, you can now provide it with the same functions which generates the XML element, e.g. rk.set.comp(Example component) rk.XML.cbox( label=Cherry, value=cherry, help=Check this to get a cherry on top.) without rk.set.comp() you'd have to 'add component=Example component' to the rk.XML.cbox() call, which is a bit annoying after the third time... to see the stored text, run rk.get.rkh.prompter() viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] quick (hopefully) feature request: show some NA info in data editor
hi, right now, the data editor doesn't visibly discriminate between NA, NA or in cells, they're all plain white, which can be a problem especially when dealing with strings. would it be much work to have those empty cells show some kind of greyed-out indicator wheter they are just empty strings () or really NA? related to this, i repeatedly had a problem with SPSS data sets where read.spss() did not trim string values, so they ended up like value and you didn't see the spaces. i have no idea yet how to solve this nicely (meaning: make it visible), but it's an awful trap if you're wondering why the hell your script doesn't find a match for value. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] writing docs [was: power analysis plugin]
hi, i'll concentrate on this part: Am Mittwoch, 8. Oktober 2014, 14:01:25 schrieb Thomas Friedrichsmeier: rk.set.comp(Example component) rk.XML.cbox( label=Cherry, value=cherry, help=Check this to get a cherry on top.) without rk.set.comp() you'd have to 'add component=Example component' to the rk.XML.cbox() call, which is a bit annoying after the third time... to see the stored text, run rk.get.rkh.prompter() Not pretending, I understood this, completely, but sounds good. Will try when I have a bit of time (not today). i've added your parts to the script now, hopefully when you look at the changes you get an idea how this works. but it's true, i should explain a bit more: there has long been a function called rk.rkh.scan() in rkwarddev, which tries to generate a complete skeleton for an .rkh file from a given XML file (or XML object). it knows a list of XML tags which might need a setting node in the help file, and therefore automatically generates a file which is already structured according to the particular plugin component. but it still missed the actual text for each setting. this has changed yesterday. with the recent SVN version of rkwarddev, all functions which generate those relevant XML nodes in the first place now have two additional arguments, help and component (as you can define several components in one script, naming the belonging component here was necessary). the interesting one is help, which takes the information you would usually give as text to rk.rkh.setting(); that is, you souldn't need to call rk.rkh.setting() at all any more, and still get your help text to the right place in the .rkh file. an example -- until recently: pwr.parameter.rad - rk.XML.radio(label=Parameter to determine, options=list( Power of test=c(val=Power, chk=TRUE), Sample size=c(val=Sample size), Effect size=c(val=Effect size), Significance level=c(val=Significance level) ), id.name=rad_pwr_param) rk.rkh.scan(pwr.parameter.rad) calling rk.rkh.scan() would have recognized radio as something to be documented and return a setting node for you to fill with text: setting id=rad_pwr_param /setting alternatively, you would manually call rk.rkh.setting() to create that node including text. now, you can document the radio node at the same time you create it with rk.XML.radio(): pwr.parameter.rad - rk.XML.radio(label=Parameter to determine, options=list( Power of test=c(val=Power, chk=TRUE), Sample size=c(val=Sample size), Effect size=c(val=Effect size), Significance level=c(val=Significance level) ), id.name=rad_pwr_param, help=Parameter to estimate, given the others., component=Power analysis) rk.rkh.scan(pwr.parameter.rad, component=Power analysis) this call to rk.rkh.scan() will now return the complete setting node: setting id=rad_pwr_param Parameter to estimate, given the others. /setting and since rk.rkh.scan() can be invoked by rk.plugin.skeleton() and rk.plugin.component(), your help file is almost already written when you designed the XML elements. you still need to write a summary and usage section, but all *settings* can be documented in place. when i tested this, i soon noticed that copying the same component stuff to every function call will bloat the script. so there's also a function to set a current default component: rk.set.comp(Power analysis) all relevant rk.XML.* functions have component=rk.get.comp() as the default value, which means pwr.parameter.rad - rk.XML.radio(label=Parameter to determine, options=list( Power of test=c(val=Power, chk=TRUE), Sample size=c(val=Sample size), Effect size=c(val=Effect size), Significance level=c(val=Significance level) ), id.name=rad_pwr_param, help=Parameter to estimate, given the others.) will also get the job done if rk.set.comp() was called accordingly. one important thing: the component name must match the name argument given to rk.plugin.component(), or the name argument passed to pluginmap (the main component) in rk.plugin.skeleton(). otherwise it won't be found. finally: setting help to FALSE will omit the XML node from the documentation -- something which wasn't possible with the previous scan method either. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http
Re: [rkward-devel] [rkward-users] [rkward-announce] Upcoming release, call for testing and translating RKWard 0.6.2
Am Montag, 29. September 2014, 20:21:33 schrieb Thomas Friedrichsmeier: RKWard: 0.6.2. I would like to ask you for help in testing, packaging and translating. a colleague of mine tried to upgrade to the new windows bundle -- but failed. the only thing he gets is a no such file or directory error, while it remains unclear which file/directory is in question. he had RKWard installed before and it worked fine. we tried to remove the .rkward folder as well as all other folders related to the previous installation, re-installed and rebooted several times, but to no avail. ideas? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] [rkward-users] [rkward-announce] Upcoming release, call for testing and translating RKWard 0.6.2
hi, Am Dienstag, 7. Oktober 2014, 17:58:15 schrieb Thomas Friedrichsmeier: - Start from the command line using rkward.exe --debug-level 4. This should print a bit more info. that helped. it turned out the installer set completely wrong paths, namely to a non-existent drive K: we had already found that for the .lnk file to rkward.exe, but the debug messages showed us that rkward.ini also looked for R on drive K: - Does any window show up, at all? Is that literally the whole error message? yes, it was the whole message. i started R in cmd.exe then, this is what was returned: snip c:\RKWardRKWard.exe.lnk Debug: path of the process dbus-daemon seems to be outside of the installPath: C:/Program Files/RKWard/KDE/bin C:/RKWard/KDE/ Debug: path of the process klauncher seems to be outside of the installPath: C:/Program Files/RKWard/KDE/bin C:/RKWard/KDE/ Debug: path of the process kded4 seems to be outside of the installPath: C:/Program Files/RKWard/KDE/bin C:/RKWard/KDE/ /snip and by the way, i now see why windows users tend to send screenshots instead of text like above: microsoft successfully managed to make copypaste from that console like impossible, select all was the only thing that worked and we had to strip the whole history. adding to that, magically translating folder names seems like a terrible feature; C:/Program Files/ is shown as C:/Programme/ in german, but using that path in cmd.exe caused really strange errors. so in essence, the problem was wrong paths. the installer did not use the installation path selected at the beginning of the process. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] power analysis plugin
hi, Am Samstag, 4. Oktober 2014, 12:08:49 schrieb meik michalke: Am Samstag, 4. Oktober 2014, 10:34:58 schrieb Thomas Friedrichsmeier: - Don't forget to require(pwr) fixed. I figured out that for less you want to specify a _negative_ effect size (and in fact, you can't enter that in the GUI). good catch. yes, right now effect sizes can't be negative, i'll try to come up with something. effect size range now covers -1 to 1 globally. it's pretty usual for correlations, at least. I suggest, either going with greater, only, or showing a warning, when the specified effect size contradicts the hypothesis. if i take the first road and go astray from the pwr options, i'll probably rename greater to something like one sided test (first is greater). i included a warning instead. it's also shown if you give a negative effect size for the other alternatives, respectively. - I wouldn't write the results to the workspace _by default_. fixed. i also fixed the sample size controls for two sample designs, and added the possibility to provide eta squared instead of cohen's f. to make it easier to test, i've released 0.01-1 last night. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] please test: new plugin for power analysis
hi, here's a new RKWard plugin for you to have a look at: rk.power screenshot: http://reaktanz.de/stuff/R/screenshot_RKWard_power.png in our repo: http://rkward.sourceforge.net/R/pckg/rk.power/index.html if you're using the repo's debian packages, you can get it via sudo aptitude install r-other-rkward-rk.power it uses the pwr package for calculation, so r-cran-pwr is a good addition, if you find it in your repositories. this is version 0.01-1, so please send me your bug reports and desired features for future releases ;-) viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] power analysis plugin
hi, Am Sonntag, 5. Oktober 2014, 14:49:40 schrieb Thomas Friedrichsmeier: On Sunday 05 October 2014 12:00:05 meik michalke wrote: i also fixed the sample size controls for two sample designs, and added the possibility to provide eta squared instead of cohen's f. a thought on that: For two samples, you could hide the number of observations _per sample_ note. ok, i'd have to change the spinbox label then, to make it clear that these numbers represent the sample size. but you're right of course, when there's two of them it's obvious it's per sample ;-) i'm amazed that almost half of that plugin code already is logic rules. That might even help work around the squeezing you get when switching from single sample to two samples (depending on dialog height). that's still an annoying bug, isn't it? by the way, while working on this i came to notice that the squeezing only happens on my laptop, not on my desktop machine -- both run the same distro, KDE and Qt versions and, from what i can see, use the same desktop theme, window layout stlye etc. on my desktop, the window is always resized accordingly (it only never shrinks after it had grown due to new elements appearing). Another thing is: Considering this looks fairly finished (apart from documentation), and useful to a wide audience, should we make this part of the 0.6.2 release? sure, why not. would someone jump in to do write the help file? ;-) how would you like to do this? generally, i'd prefer to add it as a kind of bundle, so it remains a plugin on its own, at least so it can be disabled easily in the plugin configuration. this makes it easier to release updates of that part without having to wait for another RKWard release. but that's probably a bit more complex to do right, at least for the debian packaging? On a more general note, which external plugins are ready for inclusion? don't you think the menus might get a bit to crowded if we include it all? perhaps we can re-think the plugin installations process instead, to make it more obvious which plugins are available (at least the ones in our own repo). that said, i think the plugins for ANOVA, factor and cluster analysis are quite useable -- except they all lack docs... (Well, yes, I really should have thought about this, earlier. OTOH, I think there is a point for releasing 0.6.3 rather shortly after 0.6.2 - i.e. before end of this year - anyway. This could include dynamic i18n for plugins, and some other bits that are mostly orthogonal to porting to KF5, technically.) you mean like a restart button for the R backend? :-D viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Some thoughts on switching project hosting
hi, Am Sonntag, 5. Oktober 2014, 09:27:57 schrieb Thomas Friedrichsmeier: That _is_ a discussion worth having, but right now, my goal is to explore what hosting requirements we have, and how we would go about migrating in order to ensure a mostly smooth transition. i'm glad this comes up :-) i don't know so much about the infrastructure of KDE, but having seen how smooth it is to host stuff on github, it sure is time to think about a migration, carefully. how about something along these lines: - we make RKWard 0.7.x the first KDE FW5 release branch - it starts with a new git repo, no matter where - RKWard 0.6.x remains as the KDE 4 branch, at least as long as 4.14 is commonly used; it will however only get bug fixes, development focusses on 0.7.x - it stays on sf.net SVN - later on, it can be moved to git as well, which shouldn't be so painful because there's no urgency as a side node: github has wikis for its projects, and kind-of offers downloadable binary files: https://github.com/blog/1547-release-your-software but it's probably easier to host bundles somewhere else. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] power analysis plugin
hi thomas, Am Samstag, 4. Oktober 2014, 10:34:58 schrieb Thomas Friedrichsmeier: looks really nice, already. thanks :-) - Don't forget to require(pwr) ouch... - I was rather confused by the distinction between greater and less alternatives for one-sided tests. erm, yes, me too. only as a first step, i simply implemented all options from the functions and then wanted to check on the details later. btw, i wished the documentation of pwr would be a little more elaborate on stuff like this. This should not really make any difference, or should it? Then I tried, and didn't believe my eyes, until I figured out that for less you want to specify a _negative_ effect size (and in fact, you can't enter that in the GUI). good catch. yes, right now effect sizes can't be negative, i'll try to come up with something. I suggest, either going with greater, only, or showing a warning, when the specified effect size contradicts the hypothesis. if i take the first road and go astray from the pwr options, i'll probably rename greater to something like one sided test (first is greater). would anyone consider it too much a limitation to not being able to use negative effect sizes? - I wouldn't write the results to the workspace _by default_. I guess the more common case is that the printout is all you want. ok. - This is really something where a generalized preview (similar to the plot previews, but showing e.g. a piece of HTML printout) would be nice. But of course, we don't have that, yet... absolutely. these calculations are really quick, and in reality you probably want to see how your target measure behaves if one of the assumed parameters changes, without clicking through a dialog a dozen times. in this particular case, it would be awesome if i could loop parts of the result back to the GUI, right to the control of the target measure, which is now greyed out when selected. maybe with a green border or something, so you understand that you cannot change it directly. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] power analysis plugin
hi, today i've started working on a plugin for power analysis/sample size calculation. most of what you can get from the pwr package is already implemented, open issues are handling of sample size estimation for designs with two samples, and maybe a nicer printout... here's the generator script: http://reaktanz.de/stuff/R/rkwarddev_power_plugin_script.R viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Meet PCI DSS 3.0 Compliance Requirements with EventLog Analyzer Achieve PCI DSS 3.0 Compliant Status with Out-of-the-box PCI DSS Reports Are you Audit-Ready for PCI DSS 3.0 Compliance? Download White paper Comply to PCI DSS 3.0 Requirement 10 and 11.5 with EventLog Analyzer http://pubads.g.doubleclick.net/gampad/clk?id=154622311iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] SVN version of regression plugin...
hi, Am Donnerstag, 18. September 2014, 13:28:34 schrieb Thomas Friedrichsmeier: The KDE installation could not be found (kde4-config). [...] i suspect this is due to the new startup wrapper? if i remember correctly, the startup script set some paths for the executable which might now be missing. Meik, you're much more familiar with the bundle installation than I am. Is the relative path between rkward and kde4-config (and the other KDE binaries) always the same? hm, i doubt that. it depends on the standard macports root directory, which usually is below /opt, but for the bundle it is below /opt/rkward, so the bundle doesn't interfere with a local macports installation. this also affects the relative path from the app directory of RKWard. however, the path is known during build time, and previous to the new binary wrapper it was dynamically added to the startup script. so i suspect it could dynamically be added to the wrapper code as well, and then be compiled in. Otherwise, is there a way to set the path or working directory for apps? it's possible to set paths in a *.plist file, but i'm not sure which one. we use that method already to set the locale variable, but it's neither automated (because we'd have to parse a possibly pre-existing .plist file first) nor neccessary, just described how to do manually in the wiki. i'd vote for compiling it in; the path variable was statically set in the startup script before, and i doubt that mac users move around binary directories on their systems very often ;-) viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] SVN version of regression plugin...
Am Dienstag, 16. September 2014, 23:08:40 schrieb meik michalke: i compiled and packaged today's development version of RKWard, but i couldn't test it myself, as i only have ssh access. you can download and test it yourself: ok, next round, including thomas' patches: http://sourceforge.net/projects/rkwardextras/files/MacOSX/development/RKWard-devel-binary-0.6.1-svn4834_KDE-4.12.5_needs_CRAN_R-3.1.1.dmg/download viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Slashdot TV. Video for Nerds. Stuff that Matters. http://pubads.g.doubleclick.net/gampad/clk?id=160591471iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] compile error [was: New startup procedure]
hi, Am Freitag, 5. September 2014, 13:57:17 schrieb Thomas Friedrichsmeier: - Meik: If you do get around to test on Mac... looks like it doesn't compile: snip [ 1%] Building CXX object rkward/CMakeFiles/rkward.dir/rkward_startup_wrapper.o cd /opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/build/rkward /usr/bin/llvm-g++-4.2 - DKDE4_CMAKE_TOPLEVEL_DIR_LENGTH=89 -DKDE_DEPRECATED_WARNINGS - DQT_NO_CAST_TO_ASCII -DQT_NO_STL -D_REENTRANT -pipe -Os -arch x86_64 -fno- common -Wnon-virtual-dtor -Wno-long-long -Wundef -Wcast-align -Wchar- subscripts -Wall -W -Wpointer-arith -Wformat-security -fno-exceptions - DQT_NO_EXCEPTIONS -fno-check-new -fno-common -Woverloaded-virtual - fvisibility=hidden -Werror=return-type -fvisibility-inlines-hidden -O2 - DNDEBUG -DQT_NO_DEBUG -arch x86_64 -mmacosx-version-min=10.7 - I/opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/rkward - I/opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/build/rkward -I/opt/rkward/include/QtXmlPatterns - I/opt/rkward/include/QtXml -I/opt/rkward/include/QtWebKit - I/opt/rkward/include/QtUiTools -I/opt/rkward/include/QtTest - I/opt/rkward/include/QtSvg -I/opt/rkward/include/QtSql - I/opt/rkward/include/QtScriptTools -I/opt/rkward/include/QtScript - I/opt/rkward/include/QtOpenGL -I/opt/rkward/include/QtNetwork - I/opt/rkward/include/QtMultimedia -I/opt/rkward/include/QtHelp - I/opt/rkward/include/QtDesigner -I/opt/rkward/include/QtDeclarative - I/opt/rkward/include/QtDBus -I/opt/rkward/include/Qt3Support - I/opt/rkward/include/QtGui -I/opt/rkward/include/QtCore - I/opt/rkward/share/qt4/mkspecs/default-D__APPLE_KDE__ - DR_EXECUTABLE=\/Library/Frameworks/R.framework/Resources/R\ - DINSTALL_PATH=\/opt/rkward\ - DR_LIBS=\/opt/rkward/Library/Frameworks/R.framework/Resources/library\ - DRKWARD_FRONTEND_LOCATION=\/opt/rkward/bin/rkward.frontend.app/Contents/MacOS\ -o CMakeFiles/rkward.dir/rkward_startup_wrapper.o -c /opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/rkward/rkward_startup_wrapper.cpp [...] /opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/rkward/rkward_startup_wrapper.cpp: In function ‘int main(int, char**)’: /opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/rkward/rkward_startup_wrapper.cpp:133: error: assignment of read-only location /opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/rkward/rkward_startup_wrapper.cpp:133: error: incompatible types in assignment of ‘const char [61]’ to ‘const char [7]’ /opt/rkward/bin/cmake -E cmake_progress_report /opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/build/CMakeFiles make[2]: *** [rkward/CMakeFiles/rkward.dir/rkward_startup_wrapper.o] Error 1 make[2]: Leaving directory `/opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/build' make[1]: *** [rkward/CMakeFiles/rkward.dir/all] Error 2 make[1]: *** Waiting for unfinished jobs [...] make[2]: Leaving directory `/opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/build' /opt/rkward/bin/cmake -E cmake_progress_report /opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/build/CMakeFiles 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 [ 29%] Built target plugin make[1]: Leaving directory `/opt/rkward/var/macports/build/_opt_ports_kde_rkward-devel/rkward-devel- binary/work/trunk/rkward/build' make: *** [all] Error 2 make: Leaving directory `/opt/rkward/var/macports/build/_opt_ports_kde_rkward- devel/rkward-devel-binary/work/trunk/rkward/build' Command failed: cd /opt/rkward/var/macports/build/_opt_ports_kde_rkward- devel/rkward-devel-binary/work/trunk/rkward/build /usr/bin/make -j2 -w all Exit code: 2 Error: org.macports.build for port rkward-devel-binary returned: command execution failed Warning: targets not executed for rkward-devel-binary: org.macports.activate org.macports.build org.macports.destroot org.macports.install Please see the log file for port rkward-devel-binary for details: /opt/rkward/var/macports/logs/_opt_ports_kde_rkward-devel/rkward-devel- binary/main.log To report a bug, follow the instructions in the guide: http://guide.macports.org/#project.tickets Error: Processing of port rkward-devel-binary failed /snip viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want excitement
Re: [rkward-devel] SVN version of regression plugin...
hi aaron, Am Sonntag, 14. September 2014, 10:39:00 schrieb Aaron Batty: Is there a slick way I can get the students to install that? What I have done the last 2 times I have walked a class through installation is just show up with RKWard USB thumb drives and have them follow my instructions. Is there any way to get at that version easily? i compiled and packaged today's development version of RKWard, but i couldn't test it myself, as i only have ssh access. you can download and test it yourself: http://sourceforge.net/projects/rkwardextras/files/MacOSX/development/RKWard-devel-binary-0.6.1-svn4829_KDE-4.12.5_needs_CRAN_R-3.1.1.dmg/download let me know if something's broken! viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce. Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] SVN version of regression plugin...
hi, Am Sonntag, 14. September 2014, 09:35:45 schrieb Thomas Friedrichsmeier: you're talking about the Mac version, right? As far as I am aware, we simply need to run Meik's magic script to update the bundle, but will I ever remember how to use it? it presents a usage message if called without arguments ;-) i do that with most of my scripts, as i tend to forget their specifics myself... Meik, do you have time for that, or do you want me to read up on this well, i'm on vacation and didn't try VNC in a while. i'll try the build over ssh and can test it tomorrow, will be at the office that day. for something to be released, i always purge the whole macports installation and let the script build it all from scratch -- that takes a while. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] testing localised plugins
hi, lately we're experimenting a bit with approaches to localise plugins. you may have noticed that although RKWard's menu titles are translated, most of the actual plugin dialogs are in english. heretofore, RKWard didn't support translations for plugins. this has changed in the development version (SVN after 2014-09-12), and there is now one external plugin with inital support for english and german: http://rkward.sourceforge.net/R/pckg/rk.ANOVA/index.html so *if* you're running a bleeding edge version of RKWard, have installed that plugin in version 0.01-18 *and* start RKWard in an environment with the locale set to de_DE, you should get its dialogs in german (e.g., Analysis - ANOVA - ANOVA), otherwise it should fallback to the english default. this plugin should still work with older versions of RKWard! so it would be nice if you gave some feedback anyway -- does it run in your environment? users of debian based distributions can try the debian package called r-other-rkward-rk.anova which is in our own repository. instructions on how to get that up and running can be found here: http://rkward.sourceforge.net/R/pckg/rkwarddev/deb_repo.html please note that this implementation of plugin translations is rather rude -- the package simply ships a full set of dialogs for each language. we're aware that there are more elegant ways of doing this -- yet this was kind of a low hanging fruit, and you can actually use the translated dialogs with older releases of RKWard (with a few clicks). we'll likely add a more elaborate method for this in the future. especially since using this method is only feasible if a plugin is maintained by an rkwarddev script. however, if you're simply *using* RKWard, this shouldn't concern you ;-) you don't speak german? like to help out with another translation? then please download the package sources: http://rkward.sourceforge.net/R/src/contrib/rk.ANOVA_0.01-18.tar.gz and take a look at the file rk.ANOVA/inst/rkward/rkwarddev_ANOVA_plugin_script.R in it, you will find a lot of appearances of a function called i18n(), e.g.: i18n( en=Dependent variable, de=Abhängige Variable ) so, to add a new language like french, simply add it to all the lists: i18n( en=Dependent variable, de=Abhängige Variable, fr=your translation ) (don't forget the comma...). that should do it -- you then need to run the script to build it -- once for each language! make sure to specify each language by a proper rk.set.language() call, see lines 15 ff. feel free to bug me with questions if you can't figure it out ;-) enough for now... i'd be hapy if you give it a try. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] i18n of plugins in rkwarddev
hi! Am Freitag, 12. September 2014, 18:39:58 schrieb Thomas Friedrichsmeier: On Friday 12 September 2014 13:33:11 meik michalke wrote: have you tried it yourself? Well ... you know ... err ... no. haha :-D Sorry for wasting your time. Should be fixed, now (this time I did try it, myself). de.plugin.pluginmap is the correct naming scheme. good news: i've changed the parts in rkwarddev accordingly (which was a bit more challenging than my first proposal, i must admit), and so far it seems to work just great :-) viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] i18n of plugins in rkwarddev
hi, Am Sonntag, 7. September 2014, 18:41:10 schrieb Thomas Friedrichsmeier: On Thursday 04 September 2014 09:46:07 Thomas Friedrichsmeier wrote: Here's a first idea for the process: - hide the localized pluginmaps in a subdirectory - these files would follow some specific naming convention. Easiest would be to have the lanuage code either at the start or at the end of the filename. - English version (or default language version) will not include the language code in the filename. - add one top-level .pluginmap, which includes the proper localized version as follows: require localized=true file=po/xyz.pluginmap/ - RKWard looks for files matching that name, and loads the one matching the current language, if available, or the default one. - Earlier versions of RKWard will simply overlook the localized-attribute and thus load the default language .pluginmap, as before. Ok, this is now an undocumented (and untested) feature in the development version. The localized versions should be called e.g.: de_DE.mystuff.pluginmap or de.mystuff.pluginmap (The algorithm is to prefer a language_COUNTRY match, if available, next a plain language match, next language_ANYTHING, next the default version of the .pluginmap). i can't get it to work, RKWard complains it can't find the file referenced by require. i tried both po/ plugin.pluginmap # en default de.plugin.pluginmap # de localised plugin.pluginmap# requires po/plugin.pluginmap as well as po/ i18n.pluginmap # requires plugin.pluginmap plugin.pluginmap # en default de.plugin.pluginmap # de localised plugin.pluginmap# requires po/i18n.pluginmap but to no avail :-( it partly *does* work if i leave the full english default in the top level pluginmap, though. RKWard then complains about parts being already defined and ignoring the second round of elements (the english ones of the top level map), but it does at least show the translated plugin. have you tried it yourself? is there a working example? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Rkward not starting
hi, Am Donnerstag, 11. September 2014, 20:12:56 schrieb Lee Harlow: I had Rkward installed also but since I upgraded to R 3.0.0 the GUIs will not work with R. R 3.x.x is not supported before RKWard 0.6.1, see news on http://rkward.sf.net please refer to the homepage for possible upgrade instructions (e.g., one of the launchpad PPAs): http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts if that's not it, please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us [kind of an autoresponder, sorry...] viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] i18n of plugins in rkwarddev
Am Sonntag, 7. September 2014, 18:41:10 schrieb Thomas Friedrichsmeier: Here's a first idea for the process: - hide the localized pluginmaps in a subdirectory - these files would follow some specific naming convention. Easiest would be to have the lanuage code either at the start or at the end of the filename. - English version (or default language version) will not include the language code in the filename. - add one top-level .pluginmap, which includes the proper localized version as follows: require localized=true file=po/xyz.pluginmap/ - RKWard looks for files matching that name, and loads the one matching the current language, if available, or the default one. - Earlier versions of RKWard will simply overlook the localized-attribute and thus load the default language .pluginmap, as before. Ok, this is now an undocumented (and untested) feature in the development version. The localized versions should be called e.g.: de_DE.mystuff.pluginmap or de.mystuff.pluginmap awesome! i'll patch the new name scheme into the package as soon as possible to test this. it's also awesome to sense a little life again in the project. perhaps we should rename the software to Rsome ;-) viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat gebaude 23.03.00.26 | tel +49 (0)211 8113498 d-40204 dusseldorf | fax +49 (0)211 8111753 signature.asc Description: This is a digitally signed message part. -- Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] R2HTML orphaned on CRAN
hi,
Am Mittwoch, 20. August 2014, 13:57:06 schrieb Milan Bouchet-Valat:
If nobody steps in to take up
maintainership, it will eventually be archived. As RKWard uses R2HTML
for output, it would be quite a bad situation.
indeed.
Would you be interested in working at fixing the few R CMD check WARNINGs
and NOTEs in order to update the package?
i sure don't have time to dig into the package to feel comfortable enough to
make changes.
what are the options? evaluate which functionalitiy RKWard uses exactly, and
try to replace R2HTML with maintained alternatives (if there is any)? two
things come to my mind:
print(xtable(), format=HTML)
and extending XiMpLe to make generating HTML easy enough to become independent
from other packages? here's some stuff i've been toying around for some other
project:
require(XiMpLe)
# title: character string
# head: contents of the header without title, list of XiMpLe nodes
# body: contents of the body, list of XiMpLe nodes
HTML.page - function(title=, head=NULL, body=NULL){
if(!is.null(head)){
head - list(XMLNode(title, title), unlist(head))
} else {
head - list(XMLNode(title, title))
}
if(!is.null(body)){
body - XMLNode(body, body)
} else {
body - XMLNode(body, )
}
full.header - XMLNode(head, children=head)
page - XMLTree(XMLNode(html, .children=list(full.header, body)),
xml=list(version=1.0, encoding=UTF-8),
dtd=list(doctype=html, decl=PUBLIC,
id=-//W3C//DTD XHTML 1.0 Transitional//EN,
refer=http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd;))
return(page)
}
div - function(..., attrs=NULL){
return(XMLNode(div, ..., attrs=attrs))
}
p - function(..., attrs=NULL){
return(XMLNode(p, ..., attrs=attrs))
}
head - NULL #list(
# XMLNode(script, foo)
#)
body - div(p(foo))
HTML.page(bar, head=head, body=body)
we could build on the R2HTML package code.
viele grüße :: m.eik
--
dipl. psych. meik michalke
institut fur experimentelle psychologie
abt. fur diagnostik und differentielle psychologie
heinrich-heine-universitat d-40204 dusseldorf
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Re: [rkward-devel] rk.Teaching package installation...
hi aaron, Am Mittwoch, 13. August 2014, 18:37:21 schrieb Aaron Batty: Awhile back, Alfredo Sánchez Alberca told us all about an amazing-sounding set of plugins for RKWard in his package rk.Teaching and he wanted to have them added to the main repository. The response was, These ought to be in RKWard by default! And then nothing. actually, the response was a bit more like we wait for the updated english version and put it in the repo then ;-) judging from the github repo, there seems to be no change in the package status since then: https://github.com/asalber/rkTeaching @alfredo: how should we proceed? add the outdated package -- is it fit for duty? I am trying to install the package now, but can't seem to get it in, as it has to be downloaded from his site, and none of the three versions of instructions for installation seem to work on OSX i think the problem could be that R for OS X expects binary packages by default, but what you can download from the page is the package sources. instead of install.packages(rk.Teaching, repos=NULL, dep=True) try install.packages(/path/to/rk.Teaching.tar.gz, repos=NULL, dep=True, type=source) i had to restart RKWard to have it recognize the new pluginmaps, and RKWard complained that one particular XML file (sort.xml) was missing. apart from that, it seems to run here. btw, once you installed the package in one machine, you can actually zip up the folder rk.Teaching in your R library as a .tgz file, and there you have your binary package ;-) this will work a) for any package that only includes pure R code (no FORTRAN, C, etc.), and b) also for windows, if you make it a .zip file. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Error message: R engine has died
hi, Am Sonntag, 20. Juli 2014, 14:44:50 schrieb Khalid Abdulla: I recently updated the version of R installed on my PC (running Ubuntu linux 12.04). The version of R now installed is: 3.1.1 R 3.x is not supported before RKWard 0.6.1, see news on http://rkward.sf.net please refer to the homepage for possible upgrade instructions (e.g., one of the launchpad PPAs): http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want fast and easy access to all the code in your enterprise? Index and search up to 200,000 lines of code with a free copy of Black Duck Code Sight - the same software that powers the world's largest code search on Ohloh, the Black Duck Open Hub! Try it now. http://p.sf.net/sfu/bds___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Just Installed R 3.1.1
hi dennie, Am Sonntag, 13. Juli 2014, 22:21:50 schrieb dennie: The R backend will be shut down immediately. R 3.x.x is not supported before RKWard 0.6.1, see news on http://rkward.sf.net please refer to the homepage for possible upgrade instructions (e.g., one of the launchpad PPAs): http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts if that's not it, please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Want fast and easy access to all the code in your enterprise? Index and search up to 200,000 lines of code with a free copy of Black Duck#174; Code Sight#153; - the same software that powers the world's largest code search on Ohloh, the Black Duck Open Hub! Try it now. http://p.sf.net/sfu/bds___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] R engine has died error
hi chris, Am Montag, 23. Juni 2014, 13:51:02 schrieb Chris McNorgan: Received the following error. Latest version of R was installed this morning (for the first time) from the CRAN website on Ubuntu 12.04. Following this, package manager was used to install RKWard. R 3.0.x is not supported before RKWard 0.6.1, see news on http://rkward.sf.net please refer to the homepage for possible upgrade instructions (e.g., one of the launchpad PPAs): http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- HPCC Systems Open Source Big Data Platform from LexisNexis Risk Solutions Find What Matters Most in Your Big Data with HPCC Systems Open Source. Fast. Scalable. Simple. Ideal for Dirty Data. Leverages Graph Analysis for Fast Processing Easy Data Exploration http://p.sf.net/sfu/hpccsystems___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Rkward on mac - error message -
hi, Am Donnerstag, 22. Mai 2014, 16:29:33 schrieb Eduardo Gonzalez Fraile: Hi,I've installed RKWard in my mac computer. I have launch the program, and i have receive this message of error (see attached). I can't run any command. I have installed OSX 10.9.2. Any solution? we need more information, please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE Instantly run your Selenium tests across 300+ browser/OS combos. Get unparalleled scalability from the best Selenium testing platform available Simple to use. Nothing to install. Get started now for free. http://p.sf.net/sfu/SauceLabs___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] cannot load eRm package
hi nikolaos, Am Montag, 12. Mai 2014, 13:49:11 schrieb Nikolaos Tsigilis: Thank you for the RKward project. I am using RKWard Version 0.6.0 Using KDE Development Platform 4.8.00 on a laptop with OS Windows 7 (64bit). I am trying to load eRm package in order to use IRT module (rating scale model fit) and I get the following error Warning message:package 'eRm' is not available (for R version 2.15.1). Is there any solution? the problem you're facing is not so much one with RKWard, but with R itself. you seem to have R 2.15 installed and are trying to install new packages from CRAN. the precompiled packages there are usually only available for the most recent R version, that is R 3.1. you can either update R to 3.1 (note: you *must* also update RKWard to 0.6.1 then, because 0.6.0 did not support R = 3.0 yet), or try to install the package from source, and not the precompiled package; see ?install.packages() for instructions how to do that. be aware that this might fail if your windows system isn't set up for package building yet. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE Instantly run your Selenium tests across 300+ browser/OS combos. Get unparalleled scalability from the best Selenium testing platform available Simple to use. Nothing to install. Get started now for free. http://p.sf.net/sfu/SauceLabs___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] arrived at MacPorts :-)
hi, after years of struggle, RKWard is finally officially listed as available through MacPorts: https://trac.macports.org/browser/trunk/dports/kde/rkward/Portfile thanks especially to marko and ryan for several rounds of testing and giving feedback. this development is a by-product of the fact that all of a sudden, the kde-mac mailing list awoke from the dead, which in turn was probably inspired by the activities towards KDE frameworks 5: a new hope! viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Is your legacy SCM system holding you back? Join Perforce May 7 to find out: #149; 3 signs your SCM is hindering your productivity #149; Requirements for releasing software faster #149; Expert tips and advice for migrating your SCM now http://p.sf.net/sfu/perforce___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] [rkward-cvs] SF.net SVN: rkward-code:[4787] trunk/rkward/macports/kde
hi, Am Donnerstag, 1. Mai 2014, 10:16:04 schrieb Thomas Friedrichsmeier: good. So does that mean, we don't have to depend on a particular compiler version anymore? well, it looks like it. all ports we rely on seem to have fixed the compiler dependecies on their part, so the MacPorts defaults do well now! we would need another patch for the stable binary subport, because the configure argument R_LIBDIR is being ignored, so RKWard doesn't find the rkward package and crashes ;-) however, if that doesn't become a part of MacPorts anyway, we shouldn't have to bother. Yes, let's ignore this for now, and leave it for 0.6.2. (BTW, one other thing that I really want to fix for 0.6.2 is the troubles running from paths with spaces on Windows). is that a matter of quoting all path references internally? Two more suggestions: I guess the main use-case for rkward-binary is going to remain building the bundles. It _may_ make sense to have a third Portfile just for rkward-binary, and adjust that to point to the correct SVN-location (trunk or release_branch) as needed i thought about something like that, too. allthough i would suggest to move the binary subport completely into the rkward-devel port, so we have our portfile and a clean one for MacPorts. the main difference between both portfiles at the moment is wheter a specific SVN revision is set or not, that should be easy to toggle within the devel portfile. i hope we can avoid to maintain three portfiles that way. (could that even be implemented as a variant?). i'd go for different subports. i didn't manage to bundle varaints, but that's no problem with subports. hm... which reminds me: Now that the -debug variant does not need any explicit configure arguments anymore, it does look somewhat pointless, indeed. Telling bug reporters to sudo port install rkward +debug sudo port install valgrind should not be too much more scaring than just the first line. if we also want to be able to distribute debug *bundles*, it will have to become a subport again. P.S.: Marko was addressing me when asking for Portfile patches, but as you are the maintainer, I'm not going to take any action here, unless you tell me to. i'll get to him, you don't have to bother with that. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE Instantly run your Selenium tests across 300+ browser/OS combos. Get unparalleled scalability from the best Selenium testing platform available. Simple to use. Nothing to install. Get started now for free. http://p.sf.net/sfu/SauceLabs___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] [rkward-cvs] SF.net SVN: rkward-code:[4787] trunk/rkward/macports/kde
hi, Am Mittwoch, 30. April 2014, 10:01:10 schrieb Thomas Friedrichsmeier: move ahead to 0.6.2? I think the fastest (and therefore preferrable) fix will be to add the relevant patch to the portfile. Patch attached (combination of r4654, r4657, and r4660). thanks -- that fixed the build problem. we would need another patch for the stable binary subport, because the configure argument R_LIBDIR is being ignored, so RKWard doesn't find the rkward package and crashes ;-) however, if that doesn't become a part of MacPorts anyway, we shouldn't have to bother. 1) Get the portfiles done. looks good so far. the comments from various MacPorts devs were helpful in removing old stuff which doesn't seem to be needed any longer. the files will be much smaller now. 2) Figure out what's the problem on Maverick, and fix that (may or may not be fixable with yet another source patch). let's see what marko can do with the revised portfiles. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Accelerate Dev Cycles with Automated Cross-Browser Testing - For FREE Instantly run your Selenium tests across 300+ browser/OS combos. Get unparalleled scalability from the best Selenium testing platform available. Simple to use. Nothing to install. Get started now for free. http://p.sf.net/sfu/SauceLabs___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] RKWard problems
Am Montag, 21. April 2014, 15:18:39 schrieb Thomas Friedrichsmeier: When using the CRAN version of R, install RKWard from one of these PPAs: btw, i just upgraded one machine to 14.04 and it seems the daily builds are not compiled for trusty yet, are they? viele grüße :: m.eik PS: oh and KDE 4.13 managed to break the akonadi database and IMAP resources again... i still can't fetch mail from my university account on the upgraded machine -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Start Your Social Network Today - Download eXo Platform Build your Enterprise Intranet with eXo Platform Software Java Based Open Source Intranet - Social, Extensible, Cloud Ready Get Started Now And Turn Your Intranet Into A Collaboration Platform http://p.sf.net/sfu/ExoPlatform___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] R-Engine died
Am Mittwoch, 19. März 2014, 15:08:56 schrieb Robert Maier: On a Ubuntu 12.04 system, I updated my R packages from 2.14.1 to current 3.0.3 R 3.0.x is not supported before RKWard 0.6.1, see news on http://rkward.sf.net please refer to the homepage for possible upgrade instructions (e.g., one of the launchpad PPAs): http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universita d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Learn Graph Databases - Download FREE O'Reilly Book Graph Databases is the definitive new guide to graph databases and their applications. Written by three acclaimed leaders in the field, this first edition is now available. Download your free book today! http://p.sf.net/sfu/13534_NeoTech___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Errors with RKWard
Am Dienstag, 18. März 2014, 05:20:02 schrieb Carlos Ferreira: Connection closed unexpectedly. Last error was: QLocalSocket: Remote closed let me guess, you are using R 3.0.x? that's not supported before RKWard 0.6.1, see news on http://rkward.sf.net please refer to the homepage for possible upgrade instructions (e.g., one of the launchpad PPAs): http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts if that's not it, please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Learn Graph Databases - Download FREE O'Reilly Book Graph Databases is the definitive new guide to graph databases and their applications. Written by three acclaimed leaders in the field, this first edition is now available. Download your free book today! http://p.sf.net/sfu/13534_NeoTech___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] R engine has died
hi, Am Montag, 6. Januar 2014, 13:46:44 schrieb Wilbert Sequeira Sandoval: Running RKWard on Ubuntu 12.04 LTS. When I start the program the first thing that comes up is the message telling me that R engine has died and at the end suggesting I write an e-mail to this address to inform you of this as it is not supposed to happen. Before installing RKWard, I installed R as per the instructions on http://cran.cnr.berkeley.edu/ for Ubuntu and install r-base and r-base-dev, no packages though. you are using R 3.0.x, which is not supported before RKWard 0.6.1, see news on http://rkward.sf.net please refer to the homepage for possible upgrade instructions (e.g., one of the launchpad PPAs): http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts in general, please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Rapidly troubleshoot problems before they affect your business. Most IT organizations don't have a clear picture of how application performance affects their revenue. With AppDynamics, you get 100% visibility into your Java,.NET, PHP application. Start your 15-day FREE TRIAL of AppDynamics Pro! http://pubads.g.doubleclick.net/gampad/clk?id=84349831iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] small issue
hi, i've noticed that on clean installations, the RKWard repository http://rkward.sf.net/R is listed twice in configure RKWard - R packages. any idea what causes this? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universita d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Sponsored by Intel(R) XDK Develop, test and display web and hybrid apps with a single code base. Download it for free now! http://pubads.g.doubleclick.net/gampad/clk?id=111408631iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] java and R on linux machine
hi, Am Donnerstag, 5. Dezember 2013, 09:27:19 schrieb Uwe Bohne: I almost tried for 1 week now to install rJava and package FSelector with rkward on my Linux machine but couldn't do so. I searched all the forums and tried some tricks ... but unfortunately couldn't find any solution. First of all I did try to install rJava in my rkward without any changes , that gave me the following error : configure: error: One or more JNI types differ from the corresponding native type. You may need to use non-standard compiler flags or a different compiler in order to fix this. ERROR: configuration failed for package ‘rJava’ * removing ‘/home/uwe/.rkward/library/rJava’ Warnmeldung: In install.packages(pkgs = c(rJava), lib = /home/uwe/.rkward/library, : Installation des Pakets ‘rJava’ hatte Exit-Status ungleich 0 can you install this package from a normal R session, but it only fails in RKWard? this looks like a problem with your particular R or JAVA setup, which is beyond the scope of this list. if your problem is RKWard-related, please give us some basic information: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us in case your linux distribution is debian-based, you might like to try to install a debian package of the R package in question. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Sponsored by Intel(R) XDK Develop, test and display web and hybrid apps with a single code base. Download it for free now! http://pubads.g.doubleclick.net/gampad/clk?id=111408631iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] column names can't get changed
Am Dienstag, 3. Dezember 2013, 15:02:44 schrieb Roy: I want to have a scatter plot with about 7 names but, if I change the column identity from factor to number the program doesn't get my data. when I double the level I can see all my names, in front of these names there are numbers. what is my mistake? clearly: not providing an example ;-) first, please consider these remarks: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us then, some example code and exact instructions how to reproduce your problem would be helpful. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universita d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Rapidly troubleshoot problems before they affect your business. Most IT organizations don't have a clear picture of how application performance affects their revenue. With AppDynamics, you get 100% visibility into your Java,.NET, PHP application. Start your 15-day FREE TRIAL of AppDynamics Pro! http://pubads.g.doubleclick.net/gampad/clk?id=84349351iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] R engine has died -- QLocalSocket: Remote closed
hi, Am Dienstag, 12. November 2013, 09:41:19 schrieb Christian Hohmann: Dear Rkward Developers, I experienced the problem mentioned in the subject when running some R-scripts in Rkward. The scripts call several functions, some of them with embedded fortran code. The problem does not occur, when running the scripts directly in R oder using Rscript. I'm using Rkward 0.6.0/KDE Development Platform 4.6.00 release 6 and Open Suse. are you using R 3.0.x? that's not supported before RKWard 0.6.1, see news on http://rkward.sf.net if that's not it, please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- November Webinars for C, C++, Fortran Developers Accelerate application performance with scalable programming models. Explore techniques for threading, error checking, porting, and tuning. Get the most from the latest Intel processors and coprocessors. See abstracts and register http://pubads.g.doubleclick.net/gampad/clk?id=60136231iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] RkWard/R Problem
Am Dienstag, 5. November 2013, 12:05:41 schrieb Gerardo González Aguilar: My system is the last Linux Mint, I have installed it the last Friday. are you using R 3.0.x? that's not supported before RKWard 0.6.1, see news on http://rkward.sf.net if that's not it, please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- November Webinars for C, C++, Fortran Developers Accelerate application performance with scalable programming models. Explore techniques for threading, error checking, porting, and tuning. Get the most from the latest Intel processors and coprocessors. See abstracts and register http://pubads.g.doubleclick.net/gampad/clk?id=60136231iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Clean installation on Windows
hi, Am Montag, 28. Oktober 2013, 19:14:15 schrieb SANCHEZ ALBERCA, ALFREDO: I've Rkward installed in some windows systems and I want to upgrade to v.6.0. Wich is the safest way of upgrading? How to remove the old Rkward and do a clean installation? as with the OS X version, there is no real upgrade feature yet for the windows port. but that shouldn't be too much of a problem. removing RKWard should be easy -- just delete the folder it was unpacked to. that way its configuration will be left untouched, as by default it is kept in a folder called .rkward in your user directory. in case you defined a personal library directory for R packages, these will be kept as well (but probably useless, as the upgrade will most likely install a newer R release as well, so you'll have to re-install those packages anyway). this means: if you want to completely purge an installation, remove the .rkward folder and R library as well. but for upgrades, you should rather keep them. after you removed the previous RKWard installation, simply unpack the newer bundle to the same directory. otherwise some old configuration *might* make problems, when it looks for stuff in places that no longer exist. btw., if your systems are networked, it's possible to install RKWard to a network device and run it directly off it. makes future upgrades much easier ;-) viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: OpenPGP digital signature -- Android is increasing in popularity, but the open development platform that developers love is also attractive to malware creators. Download this white paper to learn more about secure code signing practices that can help keep Android apps secure. http://pubads.g.doubleclick.net/gampad/clk?id=65839951iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Problem wtih R 3.0 Ubuntu Raring
Am 21.10.2013 11:18, schrieb Juan David OSPINA ARANGO: I upgraded R up to version 3.0 in Ubuntu Raring. Now when I open Rkward I see a warning saying that: Connection closed unexpectedly. Last error was: QLocalSocket: Romet closed The R backend will be shut down immediately... Is this an already known problem? yes, very much so ;-) R 3.0 support was added to RKWard 0.6.1, please refer to the homepage for possible upgrade instructions (e.g., one of the launchpad PPAs): http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat signature.asc Description: OpenPGP digital signature -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register http://pubads.g.doubleclick.net/gampad/clk?id=60135031iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] first draft/proposal: new graphics devices section
hi, Am Sonntag, 13. Oktober 2013, 15:25:58 schrieb Thomas Friedrichsmeier: On Monday 07 October 2013 18:20:38 Milan Bouchet-Valat wrote: That's interesting, but in the end I'm not sure this is really a good idea. Only a very short (and vague) feedback: It could simply be an optional feature. yes, i thought so as well. it should not replace the current behaviour, but become an additional option. you can already attach the graphics device, but it becomes a tab in the upper section, which i find not so useful. an alternative would be to make the editor section splitable, like kate does. but propotion-wise i'd prefer the suggested placing. splitable editor sections would be nice to have anyway ;-) In fact, now that we have our own RK device, we could even easily have a sort of combination of both: A more preview-like tool window which helps keep an overview of all current plots, and stand-alone windows to work with a single plot. it would be cool to have an overview toggle for the complete current plot history :-) but i'd prefer to have it as a general feature in the device and still be able to decide whether i want it detached or as part of the main window. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register http://pubads.g.doubleclick.net/gampad/clk?id=60134071iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] 'R engine has died'
Am Dienstag, 8. Oktober 2013, 16:44:55 schrieb Brian Cady: I got this message on opening RKWard. RKWard Version 0.5.7 elaborated guess: you're using R 3.0.x? that's not supported before RKWard 0.6.1, see news on http://rkward.sf.net if that's not it, please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register http://pubads.g.doubleclick.net/gampad/clk?id=60134071iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] get error messages when I try installing package
hi jeff, Am 05.10.2013 10:30, schrieb Jeff Stewart: Any ideas on what I can try? thanks for the report. could you provide us with some more details? please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register http://pubads.g.doubleclick.net/gampad/clk?id=60134791iu=/4140/ostg.clktrk ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] get error messages when I try installing package
hi jeff, thanks for the info. Am 05.10.2013 14:34, schrieb Jeff Stewart: Version number of RkWard: Version 0.6.1-svn Version of R: R version 3.0.2 (2013-09-25) -- Frisbee Sailing Platform: x86_64-apple-darwin10.8.0 (64-bit) Version number of KDE:Development Platform 4.10.1 Operating System: OS X 10.8.5 Method of installation: The package I downloaded was entitled RKWard-0.6.1-svn4704_KDE-4.10.1_needs_CRAN_R-3.0.0.dmg (hmmm...that might be the issue there...) ok, from the original error messages you posted it looks like RKWard tries to install packages from source (and compile them on your machine, which seems to fail). can you open your configuration (configure RKWard) and set RKWard to use precompiled binaries instead? i think it's a checkbox in the R packages config dialog. this should actually be the default for OS X, because compiling packages only works reliably if you have all needed tools set up correctly. if installation works with binaries, we know where the problem is. i'll have to look into the unused argument issue later. viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat -- October Webinars: Code for Performance Free Intel webinars can help you accelerate application performance. Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from the latest Intel processors and coprocessors. See abstracts and register http://pubads.g.doubleclick.net/gampad/clk?id=60134791iu=/4140/ostg.clktrk ___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] R Error message Connection closed unexpectedly
hi uli, Am Montag, 16. September 2013, 20:26:27 schrieb Uli Falk: i tried to update R and Rkward for Ubuntu but this morning, when i tried to start Rkward to work on my data, i got this message: [...] can you please tell me how to proceed? i need this for my work urgently. could you provide us with some more details on your setup? please check out these suggestions: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Contact#Please_read_this_before_contacting_us viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- LIMITED TIME SALE - Full Year of Microsoft Training For Just $49.99! 1,500+ hours of tutorials including VisualStudio 2012, Windows 8, SharePoint 2013, SQL 2012, MVC 4, more. BEST VALUE: New Multi-Library Power Pack includes Mobile, Cloud, Java, and UX Design. Lowest price ever! Ends 9/20/13. http://pubads.g.doubleclick.net/gampad/clk?id=58041151iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Error with RKward, version 0.6.1
Am Mittwoch, 14. August 2013, 11:51:44 schrieb Refiz DURO: yes, I think that is probably the issue :) My R version is R 2.15.2, meaning that the newest RKWard version will not work (it worked with the older). yes, that's why the file name of the package you installed says: [...]needs_CRAN_R-3.0.0[...] (but it should work with 3.0.x as well) viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Get 100% visibility into Java/.NET code with AppDynamics Lite! It's a free troubleshooting tool designed for production. Get down to code-level detail for bottlenecks, with 2% overhead. Download for free and get started troubleshooting in minutes. http://pubads.g.doubleclick.net/gampad/clk?id=48897031iu=/4140/ostg.clktrk___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Automatic crash report generated by DrKonqi for RKWard.
Am Samstag, 1. Juni 2013, 07:47:15 schrieb Finn Sandø - 3Q: -- Information about the crash: In detail, tell us what you were doing when the application crashed. The crash can be reproduced sometimes. can you explain this in a little more detail? e.g., did you load certain packages when the crash is happening, does it happen just after launch or later in a sesseion etc. also, which version of R are you using? in case it's the most recent one from CRAN, are you using RKWard compiled agains CRAN R as well? if you don't it won't work. if you're using precompiled packages from launchpad, make sure you picked the right one: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts#Inofficial_Ubuntu_repositories viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat dusseldorf signature.asc Description: This is a digitally signed message part. -- Get 100% visibility into Java/.NET code with AppDynamics Lite It's a free troubleshooting tool designed for production Get down to code-level detail for bottlenecks, with 2% overhead. Download for free and get started troubleshooting in minutes. http://p.sf.net/sfu/appdyn_d2d_ap2___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] (no subject)
hi, Am Montag, 3. Juni 2013, 12:09:03 schrieb Emanuele Nuzzo: Good morning I need help to repair RKward, it shows a message when I open it and say: which version of RKWard is this, and where did you get it? which version of R are you using? in case it's the most recent one from CRAN, are you using RKWard compiled agains CRAN R as well? if you don't it won't work. if you're using precompiled packages from launchpad, make sure you picked the right one: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Binaries_and_Build_Scripts#Inofficial_Ubuntu_repositories viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat dusseldorf signature.asc Description: This is a digitally signed message part. -- Get 100% visibility into Java/.NET code with AppDynamics Lite It's a free troubleshooting tool designed for production Get down to code-level detail for bottlenecks, with 2% overhead. Download for free and get started troubleshooting in minutes. http://p.sf.net/sfu/appdyn_d2d_ap2___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Question about plugin's translations
hi, Am Freitag, 24. Mai 2013, 10:09:54 schrieb Thomas Friedrichsmeier: On Thursday 23 May 2013 23:33:03 Yuri Chornoivan wrote: Guessing on the catalog sizes and their numbers, it would better to have one catalog for every pluginmap. Yes, I think so, too. I guess it would be really helpful to have a script that will extract all files used by a given .pluginmap. This could well be an R script using XiMpLe. Meik, I'm not sure just how much of this task you have already scripted in XiMpLe adn/or rkwarddev. Is this trivial, already? yes, should be as easy as this: library(XiMpLe) # parse the .pluginmap some.plugin - parseXMLTree(path_to/some.pluginmap) # extract the component nodes, returns a list some.plugin.comp - XMLScan(some.plugin, component) # get the values of all file attributes sapply(some.plugin.comp, function(x) XMLAttrs(x)[[file]]) this could be condensed into a one-liner, but then it's harder to read ;-) some things to be aware of: parseXMLTree() might either abort or produce rubbish if the .pluginmap includes erroneous XML (e.g., a missing / or an invalid ), even if RKWard gracefully ignores it. see that as a bug tracking feature ;-) also, i've just commited a new boolean argument to XMLScan(), as.list, because if there's exactly one result, it will directly return the single XiMpLe node, not a list of length one. the latter can now be forced by as.list=TRUE -- but this shouldn't matter here, i guess. viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat dusseldorf signature.asc Description: This is a digitally signed message part. -- Try New Relic Now We'll Send You this Cool Shirt New Relic is the only SaaS-based application performance monitoring service that delivers powerful full stack analytics. Optimize and monitor your browser, app, servers with just a few lines of code. Try New Relic and get this awesome Nerd Life shirt! http://p.sf.net/sfu/newrelic_d2d_may___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Question about plugin's translations
hi yuri, Am Donnerstag, 23. Mai 2013, 13:58:04 schrieb Yuri Chornoivan: 1. Add i18n() to all instances of plugin interface strings (menus, labels, etc.) then extract messages with extractrc (as common KDE applications do) or using sed or awk (see KStars Messages.sh [1]) using Messages.sh. RKWard plugins define their UI in XML and generate output with JavaScript, do these methods cover that as well? viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat dusseldorf signature.asc Description: This is a digitally signed message part. -- Try New Relic Now We'll Send You this Cool Shirt New Relic is the only SaaS-based application performance monitoring service that delivers powerful full stack analytics. Optimize and monitor your browser, app, servers with just a few lines of code. Try New Relic and get this awesome Nerd Life shirt! http://p.sf.net/sfu/newrelic_d2d_may___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] New default graphics device in SVN
hi, Am Montag, 29. April 2013, 10:20:39 schrieb Thomas Friedrichsmeier: In theory you should not notice much of a difference, except slighlty faster drawing, and somewhat better integration of interactive operations such as locator(). i'd say there's a noticeable difference in quality. i took these screenshots of plot(c(1:10)) using the old default and the new internal device: http://reaktanz.de/stuff/R/RKWard_gfx_default.png http://reaktanz.de/stuff/R/RKWard_gfx_internal.png the default looks much smoother, especially the different line widths of border and tickmarks in the internal device look strange. can that be improved? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Learn Graph Databases - Download FREE O'Reilly Book Graph Databases is the definitive new guide to graph databases and their applications. This 200-page book is written by three acclaimed leaders in the field. The early access version is available now. Download your free book today! http://p.sf.net/sfu/neotech_d2d_may___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] RKWard error at the start
hi, Am Donnerstag, 9. Mai 2013, 13:24:41 schrieb Yuri Chornoivan: RKWard 0.5.7 cannot work with R 3.0.0. Please install an appropriate package of RKWard 0.6.1: https://launchpad.net/~rkward-devel/+archive/rkward-stable yes, this is the solution -- almost ;-) R 3.0.0 is not part of ubuntu yet but comes from CRAN packages, therefore you'd need to use the stable packages built against CRAN R: https://launchpad.net/~rkward-devel/+archive/rkward-stable-cran (notice the -cran at the end of the URL) viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Learn Graph Databases - Download FREE O'Reilly Book Graph Databases is the definitive new guide to graph databases and their applications. This 200-page book is written by three acclaimed leaders in the field. The early access version is available now. Download your free book today! http://p.sf.net/sfu/neotech_d2d_may___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] reward feedback
hi, Am Samstag, 27. April 2013, 08:06:13 schrieb Thomas Friedrichsmeier: - You installed one of the bundles at http://sourceforge.net/projects/rkwardextras/files/MacOSX/needs_CRAN_R/ but did not install R, first (Meik, would it be possible to include a check for this in the .dmg?). sure, as soon as i find out how. in the past, the worst thing was to find documentation on the various mac package types, and then to figure out how to include a proper script in the automatic MacPorts building process. this is even a little more complex, as the portfile itself doesn't know about the R version it's building against, so this would need to be resolved as well. and it would only work for bundles, not if you install the binary subport from source (well, it wouldn't build, of course ;-)). would a check (for the mere existence of the very expected R binary file) in RKWard's startup sequence perhaps be a better place for this? at least it would also grant us with an informative error message if the problem occurs later, like after an incompatible R upgrade. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Try New Relic Now We'll Send You this Cool Shirt New Relic is the only SaaS-based application performance monitoring service that delivers powerful full stack analytics. Optimize and monitor your browser, app, servers with just a few lines of code. Try New Relic and get this awesome Nerd Life shirt! http://p.sf.net/sfu/newrelic_d2d_apr___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] (no subject)
hi john, Am Mittwoch, 24. April 2013, 19:02:52 schrieb Sakaluk, John Kitchener: I'm running this on Mac OS X 10.8.2, if that helps. of course (at least now we know it's not linux or windows ;-)). firstly, please make sure you've installed either R 2.15.3 or 3.0.0 from CRAN, and the respective RKWard bundle from this location: http://sourceforge.net/projects/rkwardextras/files/MacOSX/needs_CRAN_R/ if that doesn't help, we need more detailed information, e.g.: - your version of R - your version of RKWard - which installation method did you use for RKWard (if a bundle, please let us know which one)? please consider subscribing to this list for the time we're trying to solve this problem (so your replies will not be moderated and have to be accepted manually): https://lists.sourceforge.net/lists/listinfo/rkward-devel viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Try New Relic Now We'll Send You this Cool Shirt New Relic is the only SaaS-based application performance monitoring service that delivers powerful full stack analytics. Optimize and monitor your browser, app, servers with just a few lines of code. Try New Relic and get this awesome Nerd Life shirt! http://p.sf.net/sfu/newrelic_d2d_apr___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Error message
hi samuel, Am Mittwoch, 24. April 2013, 18:42:56 schrieb Samuel Schumacher: I wanted to try Rkward but after downloading and installing it I received the following error message: [...] I am running MacOSX 10.7.5 and have the latest version of R installed. What could be the problem? What can I do/try? unfortunately, latest is a bit vague ;-) firstly, please make sure you've installed either R 2.15.3 or 3.0.0 from CRAN, and the respective RKWard bundle from this location: http://sourceforge.net/projects/rkwardextras/files/MacOSX/needs_CRAN_R/ if that doesn't help, we need more detailed information, e.g.: - your version of R - your version of RKWard - which installation method did you use for RKWard (if a bundle, please let us know which one)? - does R itself run without problems? please consider subscribing to this list for the time we're trying to solve this problem (so your replies will not be moderated and have to be accepted manually): https://lists.sourceforge.net/lists/listinfo/rkward-devel viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Try New Relic Now We'll Send You this Cool Shirt New Relic is the only SaaS-based application performance monitoring service that delivers powerful full stack analytics. Optimize and monitor your browser, app, servers with just a few lines of code. Try New Relic and get this awesome Nerd Life shirt! http://p.sf.net/sfu/newrelic_d2d_apr___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] R3.0.0 + R engine has died -- rkward Connection closed unexpectedly. Last error was: QLocalSocket: Remote closed
hi, Am Dienstag, 23. April 2013, 10:03:45 schrieb Thomas Friedrichsmeier: 2), suggested_packages=TRUE Ouch. Search-and-replace bug, now fixed in the development version. interesting coincidence: a colleague of mine discovered the same bug just yesterday evening :-D while you're at the package management, would you consider adding a set as default mirror checkbox to the mirror selection dialog? that would be much more intuitive than only having this in the settings options. viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Try New Relic Now We'll Send You this Cool Shirt New Relic is the only SaaS-based application performance monitoring service that delivers powerful full stack analytics. Optimize and monitor your browser, app, servers with just a few lines of code. Try New Relic and get this awesome Nerd Life shirt! http://p.sf.net/sfu/newrelic_d2d_apr___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] shiny in RKWard
hi thomas, Am Sonntag, 21. April 2013, 08:49:35 schrieb Thomas Friedrichsmeier: it would be cool if shiny apps could run RKWard's tabs. in fact, it's already opened in one by default, but so far i didn't get any results to show up. however, the above test app works in konqueror, so it's probably just a matter of configuration. does anyone have any ideas? hm, sounds like it. But you're one step ahead of me. Here, the example runs ok when I set options (browser=firefox) but not with options (browser=konqueror) oh, i didn't mean the examples in the package -- those only run in firefox for me, too. i was referring to the example embedded here on the landing page: o http://www.rstudio.com/shiny/ which takes a moment to load, but then seems to run just fine, in firefox, konqueror (khtml) and rekonq (webkit). 4.10.2, i might add. i also tried the latest development snapshot from github, still doesn't work. hm, could this be a limitation in R's webserver? i'll try to set up a local shiny server and see if that helps (but it still wouldn't run in RKWard, then). viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Precog is a next-generation analytics platform capable of advanced analytics on semi-structured data. The platform includes APIs for building apps and a phenomenal toolset for data science. Developers can use our toolset for easy data analysis visualization. Get a free account! http://www2.precog.com/precogplatform/slashdotnewsletter___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] shiny in RKWard
hi, Am Sonntag, 21. April 2013, 14:16:03 schrieb Thomas Friedrichsmeier: So aparently: a) KHTML 4.10 has problems with this in general. This might be fixable by allowing to use webkit-rendering inside RKWard (I have an incomplete patch for this, locally), or updating KHTML. b) Something is different between the online example, and the local examples. This difference causes a problem for all KDE browsers, but not for firefox / chromium. I guess b is likely a bug in shiny. ok, i got the server up and running -- and apps run fine in all browsers! so it's a bug in the way runApp() deploys apps, i guess. i've created an issue on github: o https://github.com/rstudio/shiny/issues/150 viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Precog is a next-generation analytics platform capable of advanced analytics on semi-structured data. The platform includes APIs for building apps and a phenomenal toolset for data science. Developers can use our toolset for easy data analysis visualization. Get a free account! http://www2.precog.com/precogplatform/slashdotnewsletter___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] shiny in RKWard
hi, i've been playing around with the shiny package a bit: o http://www.rstudio.com/shiny/ it would be cool if shiny apps could run RKWard's tabs. in fact, it's already opened in one by default, but so far i didn't get any results to show up. however, the above test app works in konqueror, so it's probably just a matter of configuration. does anyone have any ideas? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Precog is a next-generation analytics platform capable of advanced analytics on semi-structured data. The platform includes APIs for building apps and a phenomenal toolset for data science. Developers can use our toolset for easy data analysis visualization. Get a free account! http://www2.precog.com/precogplatform/slashdotnewsletter___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] R 3.0 binaries
hi, this is just a quick note to let you know i've added binary packages for 3.0 to our plugin repository. i *believe* we might have reached a working OS X bundle again: http://sourceforge.net/projects/rkwardextras/files/MacOSX/needs_CRAN_R/ btw: with the new R version, OS X binary packages have changed their path in repositories, too: they are now stored in $REPOSITORY/bin/macosx/contrib, and no longer in $REPOSITORY/bin/macosx/leopard/contrib, and you must also use the new default package type mac.binary instead of mac.binary.leopard to instruct install.packages() to actually look there. the new paths are also implemented in roxyPackage 0.03-7. viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat dusseldorf signature.asc Description: This is a digitally signed message part. -- Precog is a next-generation analytics platform capable of advanced analytics on semi-structured data. The platform includes APIs for building apps and a phenomenal toolset for data science. Developers can use our toolset for easy data analysis visualization. Get a free account! http://www2.precog.com/precogplatform/slashdotnewsletter___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] another shortcut issue on mac
hi, Am Dienstag, 9. April 2013, 12:33:43 schrieb Thomas Friedrichsmeier: oh, no, not again. Shortcuts... can RKWard somehow check whether some of its factory defaults for shortcuts were replaced? right now we can discover this only by trialerror, who knows how many hidden replacements there still are... In essence: Ctrl+Enter/Return runs current line OR current selection (if anything is selected) Ctrl+Shift+Enter/Return runs whole script (I'll ignore the proposed new actions for now) If we go this way, what do we do about the current binding for Ctrl+Enter/Return (insert a new-line character and submit line to R)? Reassign to Alt+Enter/Return? ok with me. is there a comparable shortcut for this in other common (R) IDEs? viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat dusseldorf signature.asc Description: This is a digitally signed message part. -- Precog is a next-generation analytics platform capable of advanced analytics on semi-structured data. The platform includes APIs for building apps and a phenomenal toolset for data science. Developers can use our toolset for easy data analysis visualization. Get a free account! http://www2.precog.com/precogplatform/slashdotnewsletter___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] RKWard-devel post from huy.ngu...@upsher-smith.com requires approval
hi, Am Mittwoch, 10. April 2013, 19:42:14 schrieb Thomas Friedrichsmeier: - Which version of RKWard? - Which version of R? - Which operating system? - Which method of installation? what about adding these questions to the R engine has died message, in a please tell us... manner? most of the info could actually be given by the message itself and asked to be sent to the list (except the crashed R version, could state the R version needed, though). viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Precog is a next-generation analytics platform capable of advanced analytics on semi-structured data. The platform includes APIs for building apps and a phenomenal toolset for data science. Developers can use our toolset for easy data analysis visualization. Get a free account! http://www2.precog.com/precogplatform/slashdotnewsletter___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] another shortcut issue on mac
hi, i ran into another shortcut problem: shift+F9 is reserved to trigger some canvas mode, and run all was instead automatically matched to shift+8 in editor mode, which makes it impossible to write opening brackets (or even more critical, will run the full script if you try to open a new bracket). viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Minimize network downtime and maximize team effectiveness. Reduce network management and security costs.Learn how to hire the most talented Cisco Certified professionals. Visit the Employer Resources Portal http://www.cisco.com/web/learning/employer_resources/index.html___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Subset plugin; Release plans
hi, Am Freitag, 15. März 2013, 11:50:48 schrieb Thomas Friedrichsmeier: In the generated .xml-file, I noted that this tries to include the containing .pluginmap. I guess that's for about and dependency info? Please don't do this. ok, this was a wrong default in rkwarddev all along, fixed it and rebuilt the plugins. i also released 0.06-2 of the rkwarddev package just now. and, while at it, i've released the first debian packages of external plugins, e.g.: o http://rkward.sourceforge.net/R/pckg/rk.ANOVA/deb_repo.html try it :-) there's still a distant issue regarding package names of debian packages, which was temporarily fixed in 2.15.3-2 and 3.0.0-1, but is again un-fixed in 3.0.0-2 because my patch broke some CRAN .debs. actually they didn't break because of the patch, but because they used invalid package names in the first place: o http://bugs.debian.org/cgi-bin/bugreport.cgi?bugp4606 but i'm confident this can be resolved when the 3.0.0 release is over. i'll simply continue to use the patched file, but as long as it isn't in the official debian R packages, other's won't be able to build plugin debian packages named rk.* from source. Also, while working on the rkwarddev script, I ran into problems with duplicate ids assigned to elements with similar labels. Here's a somewhat wild thought for a possible solution: If scripts are usually warpped into local(), anyway, why not use a custom wrapper function, e.g. rkdev.scope(), instead. This would create an internal object current_scope_ids in the rkwarddev namespace. All rk.XML.*-constructors would register their ids in this variable (if it exists, i.e. if called inside rkdev.scope()). rkwarddev:::auto.ids() would consult this object to check for dupes (and probably use make.unique() to fix problems). hm, sounds interesting -- i'll investigate this! viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Minimize network downtime and maximize team effectiveness. Reduce network management and security costs.Learn how to hire the most talented Cisco Certified professionals. Visit the Employer Resources Portal http://www.cisco.com/web/learning/employer_resources/index.html___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] strange bug
hi, i get some strange bug in the development version: when i run the rkwarddevel- script for e.g. rk.ANOVA, it seems to run just fine, but i get loads of these messages: snip Fehler: cannot coerce type 'closure' to vector of type 'character' Warnung: failure to get object skeleton Fehler: cannot coerce type 'closure' to vector of type 'character' Warnung: failure to get object skeleton Fehler: cannot coerce type 'closure' to vector of type 'character' Fehler: cannot coerce type 'closure' to vector of type 'character' Warnung: failure to get object skeleton Fehler: cannot coerce type 'closure' to vector of type 'character' Fehler: cannot coerce type 'closure' to vector of type 'character' ... /snip this only occurs during the *first* run -- afterwards all is fine without these messages. it can also be triggered by source()ing the file from RKWard's console. the messages do *not* show up when source()ing it in a plain R session (make sure you set the options show, load and edit to FALSE first, R can't handle them). viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Minimize network downtime and maximize team effectiveness. Reduce network management and security costs.Learn how to hire the most talented Cisco Certified professionals. Visit the Employer Resources Portal http://www.cisco.com/web/learning/employer_resources/index.html___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
[rkward-devel] build fails with clang
hi, i'm trying to dig into the problems with the mac port. llvm-gcc-4.2 will be removed with a next release of XCode, so RKWard should be ready to build with the forthcoming default, which is clang. i've recompiled everything several times over the past two days and solved various issues. in fact, everything compiles fine now using XCode 4.6.1 -- except RKWard itself. it breaks at about 92% completion (but the reason seems to be a linking error at 86%): http://r.reaktanz.de/main.log any ideas why? note that R-framework *can't* be compiled with clang, because that one doesn't support FORTRAN; the port forces the use of gcc 4.7 instead. qt4-mac on the other hand sets gcc 4.7 on its blacklist because of other reasons and compiles fine with recent versions of clang. can either of this cause the linking problems? viele grüße :: m.eik -- dipl. psych. meik michalke institut fur experimentelle psychologie abt. fur diagnostik und differentielle psychologie heinrich-heine-universitat d-40204 dusseldorf signature.asc Description: This is a digitally signed message part. -- Own the Future-Intel(R) Level Up Game Demo Contest 2013 Rise to greatness in Intel's independent game demo contest. Compete for recognition, cash, and the chance to get your game on Steam. $5K grand prize plus 10 genre and skill prizes. Submit your demo by 6/6/13. http://altfarm.mediaplex.com/ad/ck/12124-176961-30367-2___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
Re: [rkward-devel] Trouble loading packages on the Mac
hi, Am Donnerstag, 14. März 2013, 19:25:10 schrieb Thomas Friedrichsmeier: I did not find the time to try with CRAN R, yet. Perhaps there is some extra binary or command line option for running from a terminal. could be: snip :info:configure -- Using R at /Applications/R.app/Contents/MacOS/R /snip looks like it uses R.app instead of plain R, which would be /usr/bin/R? The new cmake option is -DUSE_BINARY_PACKAGES=1 to make binary packages the default on MacOS. Without this, the default is reverted to building source packages. great :-) Having the config option means we can still try to sort it all out without hurry, after the release. i'll add a binary variant to the portfile. you can then install RKWard with the binary default by simply calling sudo port install rkward-devel +binary (i have two important meetings next monday, so i'm a bit short of time right now.) viele grüße :: m.eik -- dipl. psych. meik michalke abt. fur diagnostik und differentielle psychologie institut fur experimentelle psychologie heinrich-heine-universitat dusseldorf signature.asc Description: This is a digitally signed message part. -- Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_mar___ RKWard-devel mailing list RKWard-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rkward-devel
