calculus.
Cheers,
Tim
On 09/14/2012 04:46 PM, Ian Tickle wrote:
On 14 September 2012 15:15, Tim Gruene t...@shelx.uni-ac.gwdg.de
wrote:
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1
Hello Ian,
your article describes f(s) as sum of four Gaussians, which is
not the same f(s) from Cromer's
together.
xprep can do this.
Cheers,
Tim
On 09/15/2012 11:10 AM, Rex Palmer wrote:
Is there an easy way to make two .hkl files into one continuous
file?
Rex Palmer http://www.bbk.ac.uk/biology/our-staff/emeritus-staff
http://rexpalmer2010.homestead.com
- --
- --
Dr Tim Gruene
Institut
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
, and feed my curiosity, too.
Cheers,
Tim
On 09/14/2012 02:39 PM, Ian Tickle wrote:
On 14 September 2012 13:05, Tim Gruene t...@shelx.uni-ac.gwdg.de
wrote:
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1
Dear Niu,
as far as I can tell, all your parameters are correct and the
scattering term for f
she sees the same using PointlessScala to get mtz
file, and this has the same effect.
Kind regards,
Inge
Dr. Inge Van Molle Department of Chemistry University of Cambridge
Lensfield Road Cambridge CB2 1EW
Tel 01223330190 iv...@cam.ac.uk
- --
- --
Dr Tim Gruene
Institut fuer
, the idea is to finally compare to ideal geometry. How should
I generate these values (any softwares in mind)? ANy idea is
welcome. Thanks a lot
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version
1.5_22 on my mac to have the COEUS (MIT
software premium). My computer already has java 1.6
How to install the old version. If this old is not on the computer,
then the install commands do not work.
Thanks a lot Subbu
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr
of transmembrane domain and solublle domain
separately for comparison?
Thank you.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla
to backtrack
that far, as this data is now very far along in the refinement
process.
Thank you, Michelle Deaton
University of Denver Department of Chemistry and Biochemistry
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
regards,
Tim
On 09/05/2012 04:07 PM, Mary Ortmayer wrote:
Hi,
Thanks for your email Ed, here are the log files. Mary
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux
know how to convert a .pdf file into a
meaningful Word file. Any suggestions will be greatly appreciated.
The pdf file has numerous figures and tables.
Rex Palmer http://www.bbk.ac.uk/biology/our-staff/emeritus-staff
http://rexpalmer2010.homestead.com
- --
Dr Tim Gruene
Institut fuer
Kharagpur, India.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iD8DBQFQP1c
with.
Thanks for comments,
Tim
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
Licensee to this
Agreement..
Cheers
-- Ian
On 21 August 2012 10:55, Tim Gruene t...@shelx.uni-ac.gwdg.de
wrote: Dear all,
the FCCC license for the program scwrl4
(http://dunbrack.fccc.edu/scwrl4/license/index.html) says that
Licensee will take all reasonable precautions to avoid any
: Jan.Abendroth_at_gmail.com work:
JAbendroth_at_embios.com http://www.emeraldbiostructures.com
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG
the gauche- conformation of Tyr exists in this
structure. Should I keep it in the final model because there is no
positive map there?
Thank you very much for your input.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
not a big deal, but makes comparing secondary structures a bit
more difficult.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http
Building, Rm 310 4500 San Pablo
Road Jacksonville, FL 32224 (904) 953-6372
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http
or directory
coot-exe: ./coot-real No core file found. No debugging This is
not helpful. Please turn on core dumps before sending a crash
report
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version
' before others. That is
something that should be tested. I have a growing list of chiral
centers that have this problem if you are interested.
Cheers, Robbie
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE
9054 New Zealand Skype:
jtyndall
Ph: +64 3 479 7293
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http
_chem_comp_chir.atom_id_2 _chem_comp_chir.atom_id_3
_chem_comp_chir.volume_sign SO4 chir_01 S O1 O2
O3negativ
On 11 July 2012 10:59, Tim Gruene t...@shelx.uni-ac.gwdg.de wrote:
Dear Joel,
out of curiosity: what is the Chiral volume outliers issue?
Cheers, Tim
On 07/11/12
to download SOMoRe for
molecular replacement?
Thanks in advance
Fulvio Saccoccia PhD student Dept. of Biochemical Sciences Sapienza
University of Rome Italy
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP
the TO might consider using EPMR, another 6D MR program. The web
site http://www.epmr.info/ seems a lot more up to date ;-)
Cheers,
Tim
On 07/09/12 19:40, James Stroud wrote:
On Jul 9, 2012, at 11:02 AM, Tim Gruene wrote:
Dear Fulvio,
http://lmgtfy.com/?q=somore+molecular+replacement
should
approach?) Cheers, Alan
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
at some level. Then the volume of this blob can
be defined as Vblob = np*Vcell/N, where np is the number of grid
nodes inside the blob.
Pavel
On Fri, Jul 6, 2012 at 7:30 AM, Tim Gruene
t...@shelx.uni-ac.gwdg.de wrote:
Dear Alan,
do you think the notion of 'volume of a peak' makes sense
with:
sdcorrection norefine scales constant bfactor off reject merge 4
anomalous off
which produces similar results. no merge original index data is
already scaled and Lp-corrected so I want to avoid applying
things twice.
Thanks Phil Jeffrey Princeton
- --
- --
Dr Tim Gruene
Institut fuer
the initial conditions have been established?
Rex Palmer http://www.bbk.ac.uk/biology/our-staff/emeritus-staff
http://rexpalmer2010.homestead.com
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE
images? Thanks! Annette
--
--
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
signature.asc
Description: Digital signature
the
E-value. Is there a search engine that does that? Seems like a
fairly common need, and perhaps I just can't find on PDB website.
Thanks in advance for any suggestions,
Ed.
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-simple' saved
[111873/111873]
.: 7: build-it-gtk2-simple: not found
anyone know how to fix?
thank you all
Andre
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU
thought something like plaque formation but I can't find support
in literature.
All suggestions are welcome!!
Cheers, Anna
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG
long is a piece of string?' in which case resolution values are to
be quoted at CC 1/2 values of 0.2, 0.3, 0.5, 1, etc?
Best wishes,
Michael
Michael Roberts Crysalin Limited Cherwell Innovation Centre 77
Heyford Park Upper Hey ford Oxfordshire OX25 5HD
- --
Dr Tim Gruene
Institut
wishes,
Qixu Cai
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
specific
volume?
Many thanks in advance
Eike
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
in
the right direction?
Thanks in advance for your help!
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
and properly dispose of the e-mail.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
programs give different
alignment results such as from analysis of Clustal W and MULTALIN.
Thanks for any input or comments.
Best regards,
Donghui
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE
. Can anybody explain why this is?
It confuses me figuring out which number of reflections to use when
writing tables. I normally use the number from the indexing file.
Is this something related to default parameters in PHENIX?
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr
:35, Jacob Keller wrote:
Well, what about the original DNA fiber diffraction images--no
microcrystals there, as far as I know, but one can clearly see the
stacking distances and the phosphate backbone.
JPK
On Wed, May 9, 2012 at 11:03 AM, Tim Gruene
t...@shelx.uni-ac.gwdg.de wrote:
Dear
a
small hump around 1.5A; I suspect uncertainties in atomic positions
(i.e. the B-factor) reduce the effect. This was consistent in
several other atom-resolution datasets (of different proteins).
I'm curious what the bump around 2.25A is.
-Nat
- --
- --
Dr Tim Gruene
Institut fuer anorganische
0
3.703 20.519 8.595 1.000 2.22 ATOM 17 Q13 0
0.926 24.359 15.407 1.000 2.33
Thanks,
Kalyan
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU
coordinates are way different than when the
hydrogens are left in?
Cheers,
Chris
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG
doesnt aggregate..doesnt loose activity even after
boiling at 80C.
getting its crystal is important for my thesis. so need help.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG
)...plz if anyone is having any idea or trick let me knw.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
to do that?Or
can Coot be used to overlap DNA/RNA on their back bone by LSQ or
SSM ? At the same time, are there some software or servers can be
used to search the homology DNA in the database like the Dali
on protein? Thanks in advance! Best wishes leo
- --
- --
Dr Tim Gruene
Institut
purpose. Thank you for your cooperation.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
no installation candidate
is there some other name/link for the package other than the word
coot or do I need to install it by some other method other than
what I have been doing?
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID
Division
__
Lawrence Berkeley National Laboratory * 1 Cyclotron Rd.
Mail Stop 64R0121 * Berkeley, CA 94720-8118 * +1 (510) 495-8055
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG
with SeMet protein.)
Thank you very much for your help! best, Sarah
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http
and the cleavage did not work?
Cheers,
Tim
On 04/16/12 09:31, Theresa Hsu wrote:
Dear all
I want to digest a tagged protein with TEV protease, it has
disulfide bridges. Is there any way of doing cleavage without DTT?
Thank you.
Theresa
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
wrote:
I remember reading somewhere (or maybe at a seminar presentation?)
of an agreement between the wwPDB and the CCDC.
I can't find a reference to it on the web - is there such a thing?
Thanks (even lmgtfy answers happily received),
Paul.
- --
- --
Dr Tim Gruene
Institut fuer
list.
Cheers,
Tim
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
100.00 34.6 34.6
64.83 1.40 H L 4 NONE0.019.0 0 100.00 9.51
9.51 64.83 1.40 I FreeR_flag 5 NONE0.0 311.5 62138
31.1848.8448.84 19.96 2.00 F F 6 NONE0.014.6
62138 31.18 2.11 2.11 19.96 2.00 Q SIGF
- --
- --
Dr Tim
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iD8DBQFPhFP3UxlJ7aRr7hoRAj4HAKDpHCsN
was scaling well
in p321 spacegroup. can anyone explain whats going on?
Thank you very much
Deepthi
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment
Department of Chemistry
Colgate University
13 Oak Drive
Hamilton, NY 13346
tel: (315)-228-7245
ofc: (315)-228-7395
fax: (315)-228-7935
email: rrowl...@colgate.edu
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN
/04/12 10:53, Tom Peat wrote:
Hello Tim,
I believe the notion comes about as one can thread 64 instead of 32 addresses
concurrently, thereby boosting performance. If it has no performance boost,
why would they bother?
Cheers, tom
-Original Message-
From: Tim Gruene [mailto:t
be the
radius and a the thickness of a pizza. Then the volume
of that pizza is equal to pi*z*z*a !
**
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
Institute for Biophysical Chemistry
Hannover Medical School
Germany.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http
. (it might be wrong) It will be highly appreciable
if someone can please suggest if this the method we should use to
define the beamstop or there is any site definition file which has to
be used, as it is available for HKL2000 or how we have to define the
beamstop in mosflm.
- --
- --
Dr Tim
refmac binary? Kindly provide
some suggestion.
Thanking you
With Regards
Kavya
--
This message has been scanned for viruses and
dangerous content by *MailScanner* http://www.mailscanner.info/, and is
believed to be clean.
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Heslington YO10 5YW
tel: 00 44 1904 328259
Fax: 00 44 1904 328266
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.12 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http
, and the .ins file generated from coot is good for SHELXL, but it
didn't work all the time, eg. it work for the first few rounds, then there
is a problem.
Can you give me some suggestions about what I should do to get the SHELXL
running again?
Thanks,
Lu
- --
- --
Dr Tim Gruene
Institut
of this email or any action taken in reliance on this e-mail is
strictly prohibited and may be unlawful.
Visit us at http://www.aurigene.com
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version
in reliance on this e-mail is
strictly prohibited and may be unlawful.
Visit us at http://www.aurigene.com
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux
coefficient from a
crystallographic model of RNA-protein complex?
Thanking you.
James.
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.11 (GNU/Linux)
Comment: Using GnuPG
Molecular Biology Division
Department of Chemistry Biochemistry
University of California, Los Angeles
mi...@chem.ucla.edu
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.11 (GNU/Linux
in advance,
Regards,
ARKO
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
of context: this newsletter
article was written in the context of macromolecular refinement. And yes,
recently may be a broad term -:)
All the best,
Pavel
On Mon, Mar 5, 2012 at 12:45 PM, Tim Gruene t...@shelx.uni-ac.gwdg.de wrote:
Dear Pavel,
you may want to add to the structures
:
Rmerge: 15.0 (51.8)
I/σ(I): 7.30 (1.84)
5 monomers/AU
R/Rfree: 19.7/23.3
...ask for other infoes if you need.
Any advice/suggestion is welcome!!
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE
or less systematic test that prove this:
see On contribution of hydrogen atoms to X-ray scattering
here:
http://www.phenix-online.org/newsletter/
Pavel
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE
%.
Thank you for comments
Ros
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
happy to
improve the program if I can.
Cheers,
Tim
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
combinations to see which buffer works. For a starting point, I'd like to
use desalting colums.
Does anyone have suggestions for good buffer exchange and sample recovery?
I woud like to load about 250 uL onto each column.
Thanks a lot!
Best regards,
Sangeetha.
- --
- --
Dr Tim Gruene
Institut
? --such as the total number
of protein residues/water/ligand, the total atoms of protein/water/ligand,
the average b-factor of protein/water/ligand, the number of residues which
have alternative side chians, and so on.
Thank you.
King regards,
Wenhe
- --
- --
Dr Tim Gruene
Institut fuer
you all the members in advance, cheers, Arun
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
be helpful for conveying some ideas...
Jacob
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
10.5.8.
Thanks in advance!
Best regards,
-Rajintha
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
you to the petition:
https://wwws.whitehouse.gov/petitions#!/petition/oppose-hr3699-research-works-act/vKMhCX9k
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iD8DBQFPPRpaUxlJ7aRr7hoRAmOtAJ9myX62PYfbJ+c8hdi
this will be the default).
- Francis E. Reyes M.Sc.
215 UCB University of Colorado at Boulder
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE
a structue of protein-DNA complex with coot. I add DNA by
adding ideal DNA/RNA in the other model. But I cannot edit chi angle of
these nucletide, neither the mutate. When I press the mutate and my DNA,
coot give amino acid not nucletide. Why?
Thanks
Lisa
- --
- --
Dr Tim Gruene
), space group P3 2 1
I+: 23841.50 sigI+: 634.01 I-: 9628.57, sigI-: 264.75
Method 1: Imean=13815.32, sigImean=186.76
Method 2: Imean=11738.95, sigIMean=244.31
Method 3: Imean=11738.95, sigIMean=7106.47
Thanks a lot!
Cheers,
Markus
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
to build any peptide for my second protein.
Your help is highly appreciated.
regards
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG
and moving the detector as close as possible?
Has anybody experienced that?
And if I get the images back home, can I process them using standard
macromolecular software or do I need ab-initio special programs?
Will MR work for phasing?
Thanks in advance,
Giorgio
- --
- --
Dr Tim Gruene
Institut
using the Sc
program between a protein and DNA surface, does anybody have a
modified radii.lib file that includes information about DNA atoms?
Also, is there any reference that has information regarding the atomic
radii of DNA atoms?
thanks
Deepak
- --
- --
Dr Tim Gruene
Institut fuer
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iD8DBQFPMAcKUxlJ7aRr7hoRAuRWAJ9/mNyMeUs42RPj4AqVHoxcINFMlACeNjFj
in the attached file.
Maybe some of you have seen some programs can do this? Thank you.
King regards,
Wenhe
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using
coding/programming. Just simple calculations
from an input PDB file, B factors averages, occupancies, molecular weight, so
forth...
What should I use python,C++, visual basic?
thanks
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID
on
the corelation.
regards,
megha
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iD8DBQFPF
, stacy William wrote:
Dear All,
I am working on plant proteins and solved a structure, there is an extra
density which i cannot fix . I am attaching the coot image , can anybody
suggest me what it could be
THANKS :)
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D
at home source. I wish to combine
these two data-sets and use for SAD phasing. Can anyone suggest how this
can be done?
Regards,
ARKO
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version
there are two data sets
collected at two different wavelenghts, both of which should give rise
to a measurable anomalous signal from the Co in the sample.
Cheers, Tim
-James Holton
MAD Scientist
On 1/18/2012 3:08 AM, Tim Gruene wrote:
Dear Arko,
could you not try MAD with the two different data
the binding?
Binding condition is 50 mM Tris-HCl 8.0, 300 mM NaCl, 10 mM imidazole pH to
8.0.
Thank you.
Theresa
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU
?
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iD8DBQFPDrboUxlJ7aRr7hoRAqGJAKCRq3y9yeSLiy
Training Program
email: j-kell...@northwestern.edu
***
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-BEGIN PGP SIGNATURE-
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using
Gotthard, PhD student
Biocristallography, Biotechnology and Structural Enzymology Group
URMITE Laboratory - UMR 6236 Faculté de Médecine
27, boulevard Jean Moulin
13385 MARSEILLE Cedex 5 FRANCE
Cell.: +33 (0)6 09 54 11 58
Email: guillaume.gotth...@gmail.com
- --
- --
Dr Tim Gruene
question - can sub-angstrom resolution structures only be
obtained for a limited set of proteins? Is it impossible to achieve for
membrane proteins and large complexes?
Theresa
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
xplo2d
cp xplo2d /home/dell/Documents/usf/usf_export/bin
cd ..
endif
end
goto exit
exit 0
I have installed gfortran, could anyone help me ?
By the way, could you give some advice on calculate the size of a pocket in
the inside of a protein ?
Thanks for your attention !
- --
- --
Dr Tim
601 - 700 of 1088 matches
Mail list logo
