I am not used to this format, but I think a good (easy?) solution
would be to have the choice at load time.
Looking at the "load" documentation, maybe the "FILTER" switch could
be used for this. It says "The FILTER parameter specifies file-type
specific load options." So one could choose to load
Jonathan Gutow wrote:
> I think the solution is that we need to have buttons for angle
> measurements as well and we need to fix the shading of the icons
> behavior.
Remeber that the icons for the buttons exist already, they only have
to be implemented.
--
Hi Randy
> I tried to search the archives about this, but the archive page
> doesn't work - sorry if this is well-known.
The mail archive at SF is at best slow, but there are several mirrors
around where you can also search. The Wiki page has a link to at
least one of them.
I agree with wha
When I designed the new toolbar look (11.6), I prepared 3 icons for
measuring distance, angle and dihedral (following Bob's suggestion),
but then realized that the system is not supporting them.
Maybe it's time to include the three in the toolbar.
There is also an issue: both the measurements ic
Hello Mark
I cannot help you on the Java side, but your comment on scripted
action do have an easy solution:
> I should mention I did at first try the hide/show in the scripts. But
> they were absolute and thus awkward for my purposes. So I couldnt just
> say hide node 3 without having all the
Hello Jeroen
> Even when loading the default menu (dumped with the 'write menu'
> script), this exception occurs. I've tried using different versions
> (11.7.25, 11.6.15, 11.4.6, even 11.2.14).
There has been a bug across several later versions. This was found
recently and fixed in 11.6.13 an
Interesting, Bob
This suggests me some promising possibilities. Could your
implementation be used for them, probably using some scripting?
a) Moving a subset of the model. For example, moving a ligand out of
its binding site, to coarsely simulate the unbound or approaching
states. Or just a be
El 18 Jan 2009 a las 21:51, Robert Hanson escribió:
> comments:
>
> -- camera angle is not correct.
I had realized that the orientation was different. Don't know
anything about that, but it is as it was in the first exporter. I
will study the vrml doc to see if I can find the proper way.
I sus
You're right, Rolf. Thanks for reminding that article.
The process they use in that paper is:
pdb -> [PyMOL] -> vrml -> [Adobe Acrobat 3D toolkit] -> u3d -> [Adobe
Acrobat 3D] -> TIFF screenshots -> [Adobe Photoshop] -> edited
screenshots -> [Adobe Illustrator] -> jpeg
Then,
u3d + jpeg -> [Adob
Hi Stefan
As you see, I'm on this Jmol side too :) ...more than in JCP.
Being Java-dumb, I'm not sure of the precise technical details, but I
will try to give a clue; others can help you more.
This may be of general help:
http://wiki.jmol.org:81/index.php/Internationalisation#Translating_the
_
> There are two mechanisms for text rendering, one "simple" and one more
> complex. The issues you are going to run into include such
> technicalities as wrapped lines, centered text, vertical and
> horizontal offsets, and the boxes.
Yes, the full range of possibilities is quite complicated. I was
After some more thought...
Getting the 3D coordinates of the text so that they can be passed to
the vrml code will indeed be the best solution, as it will open the
way to not only labels, but echo (with z=0?), 3D echo and measures.
I cannot manage to get hold of the Java involved in rendering (
(I'm moving this discussion with Bob onto jmol-developers in case
others want to give their opinion)
Background:
I'm trying to add some features to the VRML exporter. Even I being a
novice in VRML, I've found that a few things can be done easily
enough.
Translucency is already in, for atoms, b
11.7.20 app
pop-up > Minimize
does nothing and raises an error in the Jmol Java Console:
openFile(C:/Documents and Settings/Angel/Escritorio/pru.mol): 281 ms
ModelSet: haveSymmetry:false haveUnitcells:false
haveFractionalCoord:false
1 model in this collection. Use getProperty "modelInfo" or
This finding was prompted by Marko Reza's recent post to jmol-users
and it looks like a bug.
Tested in 11.7.20 app:
I load a model, then pop-up, Save, State:
ERROR en guión: java.io.FileNotFoundException: C:\Archivos de
programa\moleculas\Jmol\beta\?ado.spt (El nombre de archivo,
directorio o
Bob,
in several posts dealing with the use of JmolMediaWiki Extension --
and its prospective adoption by Wikipedia-- we have being dicussing
the convenience of having a way to inactivate the "javascript"
command in Jmol scripting. That would avoid any misuse of the
extension to introduce arbi
The phrases can be marked as "fuzzy" in the PO file, so the English
terms will be used by Jmol --until they are again marked as correct.
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El 13 Nov 2008 a las 16:46, Rolf Huehne escribió:
> Interestingly these examples do work from the primary site at St'Olaf on
> the same system.
That may be due to the different version. The files at SF are older
than those at St Olaf, something may have changed. Or some files are
missing.
If I
El 10 Nov 2008 a las 6:24, Robert Hanson escribió:
> Something you don't like about that?
Oh, I rather love it!
But don't think it is the most logical place to put it...
I though it was overwriting some other entry. Now I checked out older
versions and see there was nothing there, before that f
The minimize is working again in 11.6.4 - Thanks, Bob!
But I see a funny thing which I guess has some relation to this
"fix":
Both app and applet, the topmost entry in the pop-up menu shows the
molecule name, but the first submenu entry says "Minimize" and indeed
it runs minimization!
Same in
Hi
If I have understood it correctly, and my testing suggests so,
loading several models with the TRAJECTORY keyword makes a single set
of atoms and bonds, where only coordinates change along frames.
Therefore, bonding is not recalculated when playing the animation.
However, I read that cartoon
> But browsing that list is more difficult then for finding your
> language of choice...
Why do you think that, Egon? All except one would be strange
language names... You pick the one you understand
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Yes, I see the increased size of the applet as an important issue.
I had already thought of that before, but was sure we have to
sacrifice for the usefulneess of localizations.
> also -- this introduces a need for translations of "English - United
> Kingdom" in every translation. Is the plan t
> I just added support for Amber molecular dynamics file loading --
> 1(topology file) + n(coordinate file) and with the FILTER option and
> a new option to allow selective "first,last,step" loading of
> coordinate trajectories, Jmol should be significantly useful in that
> area. That's in 11.7
Both
http://jmol.org/
http://www.jmol.org/
are broken; they show an Apache info page
wiki.jmol.org is working, though
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That has worked, Nico. Thanks!
Nico wrote:
> In org.openscience.jmol.app.Jmol.java, try replacing the line n° 1173:
> JMenu menu = guimap.newJMenu(key);
> by the following lines :
> JMenu menu = guimap.newJMenu(key);
> ImageIcon f =
> JmolResourceHandler.getIconX(key + "Image");
> if (f != nu
> Dear all:
> I've thought of a way of making the javascript for the export to web
> functions more flexible. Since we always save this script with
> the .html, .spt, etc... used to make the page, I don't think I have
> to maintain backwards compatibility, do I?
I don't think so. Th
I am investigating how to plot a mathematical function using
isosurface functionXY .
I went to the page
http://chemapps.stolaf.edu/jmol/docs/examples-11/isosurface.htm
section #14, and the first red link gives an error:
(Jmol 11.5.44)
isosurface functionXY "curveAsArrayXY" {-5 -5 -5} {-11 1 0 0}
Dear developers:
I have set contact with Walter F. de Azevedo, Jr. (Pontificia
Universidade Católica do Rio Grande do Sul, Porto Alegre, Brazil),
who has developed an algorithm for finding hydrogen bonds between
proteins and ligands. Apparently, this algorithm may also be used for
protein-prot
Hi JIJI
I'm not sure if you can create bonds between models, but if so, it
would be like this:
If you load them in that order, 1prg will be model 1 and 4hhb would
be model 2; so:
connect ([SER]123:A.O1/1) ([PRO]34:B.CB/2)
(assuming that O1 and CB would be the atom IDs you want to bond)
or
c
El 7 Apr 2008 a las 14:11, Andreas escribió:
> this was the new code:
>
>
> jmolInitialize("Jmol");
> jmolApplet(500, "load " +"${Page3_protein.valueForJmol}");
>
Maybe there's no difference, but I meant the second part without
quotes:
jmolApplet(500, "load " + ${Page3_protein.valueForJmol});
El 7 Apr 2008 a las 12:28, Rolf Huehne escribió:
> > CTRL + Left mouse drag action add a atom ( a Carbon)
>
> This only opened up the Jmol popup menu.
In Windows, Ctrl-click opens the menu, but Ctrl-drag adds atoms. Just
hold the mouse button.
Hi Andreas
I've got no experience with your scripting languages, but try this:
jmolInitialize("Jmol");
jmolApplet(500, "load " + ${Page3_protein.valueForJmol()} );
Thta way, the dynamic value will be evaluated first and then passed
to Jmol.js to build the applet.
--
Bob Hanson wrote:
> that's next. I have an idea but no time to work on it. It would involve
> the MOL2 format bond stereochemistry designations.
I can't find anything about stereochemistry in the MOL2 specs, but
MOL has "up", "down", "none" and "nonspecified" bond types (and
JChemPaint exports
It seems that the problem are the double bonds.
Cholesterol is done very nicely!
I've set up a test page at
http://biomodel.uah.es/Jmol/minimize/minimize.htm
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This is the Java console:
FileManager opening F:/webs/_Proyectos/_pruebas/Jmol/Jmol-
minimize/thyroxine.cml
FileManager.openFile(F:/webs/_Proyectos/_pruebas/Jmol/Jmol-
minimize/thyroxine.cml) //F:/webs/_Proyectos/_pruebas/Jmol/Jmol-
minimize/thyroxine.cml
FileManager opening F:\webs\_Proyectos\_p
Hi Jiji
It all depends on how you apply the color to the 2nd model. If you
are doing "select all", that will select the first model too.
You must do
select 1.0
color red
select 2.0
color white
frame all
(check the documentation on atom expressions at
htt
El 17 Mar 2008 a las 9:55, »»»JIJI«««.: escribió:
> i want to show only the base name
> ex: if i upload file programmatically "viewer/1prg.pdb" then in the
> viewer also it is coming "viewer/1prg.pdb" like this.
>
> I want the name as 1prg.pdb
Hi Jiji
That will be hard
Hi all
My talk is scheduled for Wednesday morning. You can have a peek at
http://biomodel.uah.es/personal/2008/UK/
Hints welcome
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Dear developers:
I'd like to let you know that next week I will be participating --as
a Jmol representative ;-) -- in
"Molecular Modelling: Tools, GUIs and Visualisation"
a CCP1 meeting looking at graphical interfaces,
visualisation and general tools for molecular modelling in general,
but wit
Bob wrote:
> Angel Herráez wrote:
[...]
> >That is, "serif", "monospaced", "italic", "bold" all have no effect; all I
> >can get is sansSerif
> >plain. The size can be set OK..
> >
> >
> Hmm. This all worked fine for me:
It's working for me now too. Must have been some temporary failure
(or
After "calculate structure" with a protein, there is no effect of
"color structure", everything is carbon grey.
Is this a bug?
11.4.RC2
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Hello JIJI
You would be better sending these questions to the jmol-users list
instead of the developers list.
Regarding your question, I think it may be done using "write history"
http://chemapps.stolaf.edu/jmol/docs/?ver=11.4#write
Hello JIJI
> if i upload one model and change the state to cartoon, then after
> that if i append another model then the previous upload model is
> displays in old state.
I don't see that using the application, and it should not happen in
theory.
> So, is their any option to save the state of
Egon wrote:
> Yeah, I was thinking about it earlier... these things tend to be a bit
> tricky... because one could wonder where this will end... Moreover, SF
> does not allow advertisements on SF hosted websites (without their
> approval at least...)
That was my feeling. And that SF policy is qui
Although I cannot find the original posts, I think we discussed this
already and it was being fixed. I find it is not (11.4.RC1).
Changing the interface language from a script
language = en
does not work unless I enclose the language code in double quotes
Is it supposed to be so? The doc do
Hi all
Today Noel Boyle suggested that I advertise my book in Jmol website.
I had not dared thinking of it (I did put it in the Wiki), but you
can give your opinion. I will accept a "better don't do it" without
trouble.
Here's Noel's reasoning:
--- Forwarded message follows ---
You sh
> If i upload three model and i want to view only first and third
> model. so in jmol it is option of one model or all model. so can u
> tell how to choose model of user choice.
You need
frame all
(which will activate viewing all models at the same time)
and then
display 1.0, 3.0
which
Emily, I'm not sure, but check out Eric Martz's work on "FirstGlance
in Jmol". I seem to remember he implemented sequence selection and
highlighting: http://firstglance.jmol.org
If not, maybe somebody else has done it and that's why I remember.
In any case, it's a question of sitting down and i
»»»JIJI«««.: wrote:
> Dear all,
>
> can anyone suggest the command to se for multiple files to upload
This is a topic more adequate for Jmol-users list.
You can see this in the scripting documentation. To load several
files, you use
load "file1.pdb" "file2.pdb" "file3.mol"
or you can loa
On 21 Dec 2007 at 13:11, Emily Heureux wrote:
> The jmol looks like it is starting. I see the purple "Jmol" at the top, and
> at the bottom of the browser, it says, "Applet jmolApplet0 started". It
> stays that way, so there is an empty black box on the screen. If I
> right-click to use the jmo
Hi Emily
I do not envisage any effect of Jmol version.
Can you say precisely what is not working? Do you see the applet? Any
errors in the Java console or Javascript errors?
Are you testing the page from hard disk or from web server?
The technicalities of Java are beyond my reach, but I think until
this is solved we should alert users about compatibility.
If any of you can provide a description, I will add it to the website
and Wiki. For example, along the terms of "you need Java JVM version
1.4 or later (v1.5, v5, v6), but
OK, so I thnik I just caught a bug
11.3.52
I was testing (applet) some measurements and issued
set monitor 0.3
I couldn't see them.
So, I opened the application and tested on a small molecule:
As soon as I give a thickness for monitor lines, the line is drawn
but does not follow the mode
El 3 Dec 2007 a las 20:59, Bob Hanson escribió:
> How are others feeling? Should we shoot for Dec. 15 for a release of 11.4?
I think that's OK.
> Probably should get as much translation done as we can. I don't think
> I've added anything particular in that regard recently, but it wouldn't
> be
On 28 Nov 2007 at 10:16, Anubhav Jain wrote:
>
> Yes, I think the new link scheme is probably the problem.Here are some of the
> sites with the
> wrong link:
>
> http://wiki.jmol.org/index.php/Applications_Embedding_Jmol
This is under my control (in fact, under any of you, since the Wiki is o
Anubhav, if you can point at where the wrong links are, I may be able
to fix them (if they are in Jmol website).
SF changed their URL scheme with no warning, from svn.sourceforge
etc. to jmol.svn.sourceforge etc -- It may be that.
El 27 Nov 2007 a las 22:39, Bob Hanson escribió:
> there must b
> >Comment By: Bob Hanson (hansonr)
> set spacefill 200%;color translucent 1
Sorry, what is "set spacefill" supposed to do?
Does it compare to "spacefill 200%"?
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Dear Jonathan:
I understand completely your situation, as it is the same around
here. Fortunately for me, even if I don't get official credit for
participating on these activities, at least I am not punished!
If you can think of any way we could support your cause, please let
us know. I would
I think that's a sensible proposal
El 6 Nov 2007 a las 11:33, pim schravendijk escribió:
> Is this desirable? I guess not! I suggest a maximum width of the main
> left-mouse menu, cutting off the title part that surpasses this
> width, and putting the full title in the submenu directly at the
This in an interesting proposal, Egon, but we should careully design
what will go there. There is already the Wiki, where anyone can
contribute, and having 3-4 places where to look for info is not good
for users...
> The blog could contain announcements of:
> * new websites using Jmol **
El 2 Oct 2007 a las 11:49, Jonathan Gutow escribió:
> Nico,
> I'm getting a file not found error for all of the downloads. Is the
> file not up yet?
Me too.
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> This is going to look good:
> http://www.molmod.com/~schraven/jmolscreenshot.jpg
> http://www.molmod.com/~schraven/povrayscreenshot.jpg
Hey, Pim, that looks gorgeous!
Good work!
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Bob wrote:
> Neither of these solutions is impossible. I propose we implement the
> second -- a ribbon associated with carbohydrates. Jmol already identifies
> chains of carbohydrates and can show a trace through the anomeric carbon
> atoms.
Wow, I didn't know that ribbons were already implement
We've been trying to model the helix trajectory of an amylose chain. I've
achieved a nice
helical rope using "draw curve" command. Given that its aspect is closely
similar to what is
rendered by "trace" in proteins, I wonder how difficult it would be to
implement "draw"
building some kind of
Hello Fernanda
This looks interesting for other users (I don't use a Mac).
If you could write brief instructions of how to use it, I can add it
to the Wiki page devoted to icons and so:
http://wiki.jmol.org:81/index.php/Recycling_Corner
and to the app section
http://wiki.jmol.org:81/index.php/Jmo
On 26 Jun 2007 at 19:32, David Kim wrote:
> Is there a function where Jmol can display the parital charges of a molecule.
Yes indeed, as long as the file format provides it. No calculation possible.
> If so, what type of file
> and calculation would have to be run for it to be able to show(i.e
Hi Kent
Your description fits perfectly with using "monitor" lines (a.k.a.
measurements).
> So when there's a distance
> restraint between two atoms we'd like to show this with a line that's
> dashed, or a different color, or something like that.
If your know the atom numeric IDs, just use:
write
to me directly.
Good luck
·
Dr. Angel Herraez
Dep. Bioquimica y Biologia Molecular, Universidad de Alcala
E-28871 Alcala de Henares (Madrid), Spain
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> $ LANG=C svn proplist --verbose Jmol/appletweb
> Properties on 'Jmol/appletweb':
> svn:ignore : Copia de Jmol.js
>
> You added "Copia de Jmol.js" to the svn:ignore property of the
> trunk/Jmol/appletweb directory. I removed it with the last commit.
Thanks, Daniel, for fixing it.
That's someth
Daniel Leidert wrote:
> I would call it README.es.txt or users will loose the overview, which
> file contains which information when "README", "COPYING", ... filenames
> are translated too. For consistency I would only add only a language
> code to the filename, if you translate the content.
>
>
Thanks all for the advice
but I'm not using command-line access to SVN, nor Eclipse. I use TortoiseSVN,
which for me
is intuitive, and does nicely the job of updating and committing changes; I
have Eclipse
installed, but can't get hold of how it works; just use it for building
jmol-web locally
Dear developers:
I just accidentally comitted some update arising from a conflict between the
copy at SF and the local one at my computer.
It is labeled as 7683
I don't know how to cancel that at SF and bring the system back to 7682
Thanks for any fix or advice
---
On 12 May 2007 at 17:00, Daniel Leidert wrote:
[big snip]
> So I guess
> (but don't know it for sure) you cannot assume, la = la_LA (this might
> be the case for German, but it's not a must).
It is not. The more evident example is English, but there are many.
---
Hello Lam
The scripting language is certainly much more powerful than anything,
but the pop-up menu has many of those features.
The top menu bar in Jmol is very limited, and only needed for file
operations.
The reason for this is that the pop-up menu is shared by the
application and the applet
Very good, Bob
I'm intercalating some suggestions:
> Executive Summary
>
> If you are a typical Jmol user, just transfer the JmolApplet0*.jar files
## add this to clarify the asterisk (either not understood by non-
MSDOS people or plain unnoticed for its small size) ##
(th
> Here's what I'd like to know: What are the assumed country codes for the
> following, if there is such?
>
> {"ca", GT._("Catalan")},
> {"cs", GT._("Czech")},
> {"nl", GT._("Dutch")},
> {"et", GT._("Estonian")},
> {"fr", GT._("French")},
> {"de", GT._("German")},
> {"
On 11.1.34, after loading an isosurface from a button in the page, I tried the
pop-up
menu options
Surfaces > Make Opaque
Surfaces > Make Translucent
and nothing happens; with the console open, an error is shown.
Surfaces > Off works OK, removing the surface
These are
I've just downloaded 11.1.34 from SF and both the applet and the app work
correctly when switching languages.
Opening, the default locale is shown (es).
I can switch back and forth between languages and the whole menu
changes correctly. Also, the full menu is active.
The language setting is persi
Bob, I'm back at home before than expected, so I can work on Jmol.js
Please, let me know what needs to be done, whenever it's convenient to your
flow of
improvements.
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Bob, that sounds like a VERY interesting capability. The only thing
why I miss Chime is the loading speed.
> 2) By setting debug="off" we reduce the size of the overall package by
>about 30%. That in itself is considerable.
Indeed!
>jmolSetFileTypes("xyz,mol,cif,pdb")
I think this is
Hello Ajay
> The following is a snippet of code from JmolConstants.java
>
> 2424 //"@hetero", handled specially
>
> I'd like to know how hetero molecules and "non solvents" are handled.
I can't help on that details, but based on the pop-up menu options, I
would say it is based on HETA
Hi Samuel
Tricky business, but very satisfying.
Basically, what you need is "isosurface"
http://www.stolaf.edu/academics/chemapps/jmol/docs/?ver=11.1#isosurface
Look particularly for the options "colorscheme", "map" --I'm still not
proficient
on those.
The rest depends on what is the format of
Hello Ajay
> http://wiki.jmol.org:81/index.php/AtomSets
As I wrote most of the page you cite, I'll try to answer first. (although that
info is collected
from other places, not invented or written by me)
> I'm curious as to how jmol goes about classifying hetero atoms into various
> atom sets
El 24 Apr 2007 a las 8:55, Bob Hanson escribió:
> Angel Herraez wrote:
>
> >> also be included in 11.0.2 when it is released.
>
> I think that will be 11.2
No, I meant 11.0.2. I understand that there are some fixes in 11.0
branch that have not been released yet, so I ad
I have a PDB file with 2 models (named 1 and 2).
Issuing
"model 0"
"model 3"
"model 4"
shows all models. (Same with "frame")
The zero case could be accepted --although I prefer "all"--, but I
find that accepting nonexisting frame nrs. is misguiding and
inconvenient. I see this as a bug. Can it be
Don't know if this will be of help, but in my system (WinXPsp2, up-to-
date with Java), Netscape 4.7 about:plugins says:
File name: C:\Program
files\Netscape\Communicator\Program\plugins\NPOJI610.dll
Java Plug-in 1.4.2_12 for Netscape Navigator (DLL Helper)
So, it seems to me that later ver
After loading 2 files, Jmol 11.0 accepts
"select model=1001" or "select model=2001"
as well as
"select */1001" or "select */2001"
However, 11.1.27 does not select anything with
"select model=1001" or "select model=2001"
or
"select model=1.0" or "select model=2.0"
but works OK with
ried to write a more detailed description.
Comments are welcome. Once it is complete, I think it should go in
some of the documentation pages. I still don't know how to edit the
Jmol Guide pages in SVN.
·
Dr. Angel Herraez
Dep. Bioquimica y Biologia Molecular, Univ
Thanks, René
It seems you are right: axisangle uses the viewport coordinates, not
the molecular coordinates. I understood the opposite from the
documentation.
Is that right, Bob?
I find this disconcerting; I thought the {x y z} syntax was molecular
coordinates.
Maybe this is because rotate A
Hello
I'm investigating the variety of new rotate/spin options using
molecular axes.
Shouldn't
spin axisangle {2.312 1.192 6.993} 10
do the same as
spin 10 {0 0 0} {2.312 1.192 6.993}
?
I am getting a completely different axis of rotation with the first.
See
http://biomodel.uah.es/pruebas/jmo
El 10 Apr 2007 a las 17:24, Bob Hanson escribió:
> output files, not input files. Do we say we can read Gaussian input files?
No. This is what we have:
Jmol website, home page: "Gaussian 94/98/03 output"
Jmol Guide: "Gaussian 92/94/98" ***not very clear***
Jmol Wiki: "Gaussian input, output an
On 1 Apr 2007 at 19:02, Julie Mitchell wrote:
[snip]
> Alternately, I am unable to get the jmolAppletSigned to load.
> The exact same code calling jmolApplet works just fine, but
> I cannot get the signed version. Is there some magic extra
> chant? I don't see much documentation for the signed
Hi Bob and others
1.
I don't see it in jmol-commits yet, so I'd better warn you.
Last night I commited a fix for Jmol.js, related to using percent
applet sizes or pixel sizes. After Bob's last fix, there were still
things preventing some browsers to show applet or raising errors, so
I went thor
On 23 Mar 2007 at 13:40, Bob Hanson wrote:
> Little know page, I think:
>
> http://sourceforge.net/news/?group_id=23629
Yeah, I didn't know about that.
You want just a link to that exact page, right?
I'll do it.
> I think it's a nice place to highlight the new features. I'm imagining
> "News"
> My problem: First, this change has always bugged me. I didn't understand
> the rationale then, and I can't remember it now. I don't see why anyone
> would one ever want the molecule to automatically be larger than the
> window in one dimension.
I hope I can summarize my viewpoint in favour o
Mostly I think that zoomLarge true is adequate; if one has a narrow,
long molecule and sets a wide rectangular Jmol panel, one wants it to
be used (as it has happened to me with DNA).
What I don't see is why a change in applet size won't affect equally
in both cases (no need to further comment
I'm not sure, but I guess I should be able to do the update; will try
later.
Where's exactly the news you have updated?
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El 22 Mar 2007 a las 14:35, Bob Hanson escribió:
> ah, yes. That's item #41 -- use of unicode I just added. The lesson is
Works correctly now in IE7, IE6, IE5.5 -WinXP
There is, however, a minor thing (irrespective of browser):
translation of the model is not reproduced.
If I move the model
Hi Bob
> http://www.stolaf.edu/academics/chemapps/jmol/docs/examples-11/new1.htm
This page does not open in IE7 WinXP: blank page, javascript
complain: 'model' is not defined', line 198 (I wouldn't trust too
much the line number given)
Same in IE6; MS script editor says: "an hexadecimal d
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