Re: [ECOLOG-L] online resource guide for environmental science degree programs

2012-02-22 Thread malcolm McCallum
Chris is on the ball. Although an environmental scientist and and ecologist overlap in their education, and can and often do similar things, they are not equivalents. An environmental scientist will be steeped in ecology, but also policy and economics. This person will be trained to address

Re: [ECOLOG-L] current news stories for use in ecology lectures

2012-01-31 Thread malcolm McCallum
as biased conservative, biased liberal, or relatively unbiased. This can be a pretty nifty way to get people talking. I like to get an article online from an MSNBC, Fox News, and then a very very strait unbiased article (often from BBC or one of the science news outlets). Fun Fun FUn Malcolm McCallum P.S

Re: [ECOLOG-L] academic publishers and politics

2012-01-21 Thread malcolm McCallum
For people who are interested in the politics of publishing and citation metrics, the following are really worth reading...technically, we should all be following this stuff. Although scientists in general are pretty smart, a huge bunch of us tends to ignore the continual political under-cutting

Re: [ECOLOG-L] Open Access References Re: [ECOLOG-L] NYT OP-ED piece about public access to research publications

2012-01-12 Thread malcolm McCallum
Commercial journals and prestigious journals are not inclusive of one another. Commercial journals use a number of strategies to inflate their initial impact ratings. These strategies are not available to most non-commercial outlets. For example, most societies publish 1-2 journals. Most

Re: [ECOLOG-L] Is there a referee crisis in ecology?

2012-01-07 Thread malcolm McCallum
Recent joint editorial from all herp societies published in Herpetological Conservation and Biology. The peer in Peer Review. http://www.herpconbio.org/Volume_6/Issue_3/Joint_editorial_2011.pdf On Thu, Jan 5, 2012 at 4:02 PM, Chris Lortie lor...@yorku.ca wrote: Dear Ecologgers, Thank you so

Re: [ECOLOG-L] need advice on training

2012-01-04 Thread malcolm McCallum
. Biochemistry and Molecular Biology Founder/Owner: All Things Bugs Capitalizing on Low-Crawling Fruit from Insect-Based Innovation http://www.allthingsbugs.com/Curriculum_Vitae.pdf https://www.facebook.com/Allthingsbugs 1-352-281-3643 On 1/3/2012 7:24 PM, malcolm McCallum wrote: Have you done

Re: [ECOLOG-L] need advice on training

2012-01-03 Thread malcolm McCallum
. The basics can be learned with a tutor in about half an hour. The power of GIS, however, takes a lot longer to master. I have taught undergrad/grad courses in GIS many times, and have used it quite a bit. Malcolm McCallum On Mon, Jan 2, 2012 at 6:13 PM, Christi Yoder cyoder...@gmail.com wrote

Re: [ECOLOG-L] UC-Berkeley and other ‘public Iv ie s’ in fiscal peril

2011-12-28 Thread malcolm McCallum
Its all pretty obvious. Federal government establishes federally funded financial aid to help those in need. State governments cut funding to universities, so universities are forced to raise tuition and get more of their finances from the federal financial aid programs. Lets say a ficticious

Re: [ECOLOG-L] Methods for population estimates in amphibians

2011-10-24 Thread malcolm McCallum
into the literature on amphibians and reptiles. Also, to some degree insect methods may be useful. Malcolm McCallum Department Molecular Biology and Biochemistry University of Missouri Kansas City Managing Editor, Herpetological Conservation and Biology On Sun, Oct 23, 2011 at 10:17 AM, Eric Flores sail

[ECOLOG-L] Fwd: [NHCOLL-L:5688] Status of the University of Memphis Collection of Mammals

2011-10-13 Thread malcolm McCallum
-- Forwarded message -- From: Revelez, Marcia A. mreve...@ou.edu Date: Wed, Oct 12, 2011 at 4:30 PM Subject: [NHCOLL-L:5688] Status of the University of Memphis Collection of Mammals To: nhcol...@lists.yale.edu nhcol...@lists.yale.edu Integration of the University of Memphis

Re: [ECOLOG-L] a non Ivory Tower view of invasive species

2011-09-13 Thread malcolm McCallum
? In environmental science no one talks about NATURAL. You have impaired, unimpaired, and degrees of impairment because that has a meaning. Natural is too nebulous and subjective. Malcolm McCallum On Sun, Sep 11, 2011 at 10:50 PM, Eric North xcs...@hotmail.com wrote: This is a troubling

Re: [ECOLOG-L] a non Ivory Tower view of invasive species

2011-09-12 Thread malcolm McCallum
What is NATURAL? In environmental science no one talks about NATURAL. You have impaired, unimpaired, and degrees of impairment because that has a meaning. Natural is too nebulous and subjective. Malcolm McCallum On Sun, Sep 11, 2011 at 10:50 PM, Eric North xcs...@hotmail.com wrote

[ECOLOG-L] scissor tail fly catchers

2011-09-08 Thread malcolm McCallum
we normally have literally 30-60 Scissor Tail Flycatchers around on our property during the summer in NE Texas (Texarkana, Bowie Co.). This year we have none. Has anyone else noticed a disappearance (or resurgence) in this species this year? -- Malcolm L. McCallum Oceania University of

Re: [ECOLOG-L] free sources for citation data

2011-09-08 Thread malcolm McCallum
Harzing's Publish or Perish has been using this database for a long time now. Last I checked they had not opened up the Google version yet. On Thu, Sep 8, 2011 at 4:42 PM, David Inouye ino...@umd.edu wrote: Some information from an article in 4 August 2011 Nature, Computing giants launch free

Re: [ECOLOG-L] Is academic publishing a racket? Yes

2011-09-06 Thread malcolm McCallum
ON a related thread. Lawrence 2007. The mismeasurement of science. Current Biology http://www.labri.fr/perso/gimbert/lawrence-current-biology-2007.pdf Excerpt: Answer from the hero in Leo Szilard’s 1948 story “The Mark Gable Foundation” when asked by a wealthy entrepreneur who believes that

Re: [ECOLOG-L] Is academic publishing a racket?

2011-09-06 Thread malcolm McCallum
Having run an open access herpetology journal for 6 years that has no page charges, no upload fees, is run entirely by volunteers, and is rapidly rising in stature with coverage by Journal Citation Reports and having many articles been widely covered by the media, I find the excessive fees

Re: [ECOLOG-L] Is academic publishing a racket?

2011-09-04 Thread malcolm McCallum
Open access is a completely different issue from the publishing racket. In fact, running an open access journal online is so much cheaper than a traditional journal its funny. However, the posting fees for many of these outlets amount to 1000s of dollars. Where is the money going? The reduced

Re: [ECOLOG-L] Ethics of spousal hires (was Re: [ECOLOG-L] Job Announcement: US Forest Service Ecologist)

2011-08-21 Thread malcolm McCallum
Unfortunately, there climate of universities is rapidly shifting to this viewpoint that they make money. However, this focus on the internal exchange of money between a student and the institution, or a grantor and the grantee, ignores the obvious externalities that higher education provides to

Re: [ECOLOG-L] Ethics of spousal hires (was Re: [ECOLOG-L] Job Announcement: US Forest Service Ecologist)

2011-08-20 Thread malcolm McCallum
I'm not sure if everyone is aware, but there is also what is called a shared position. Basically, the school hires the married pair and they share the opening. They each share teach responsibilities (and the salary) and both must make tenure or neither does. It is virtually impossible to know

[ECOLOG-L] Medawar: Advice to a Young Scientist

2011-08-20 Thread malcolm McCallum
I have found this publication to be very useful during my academic career. It was written by a Nobelaureate. I'm not sure how much of it is good advice in all situations, but at least it gives you something to think about. here is a link to it on Google Books:

Re: [ECOLOG-L] Job Announcement: US Forest Service Ecologist

2011-08-19 Thread malcolm McCallum
My personal experience with USOPM and applications: I have applied for many positions with the Feds since 2003. I have reached the interview stage 6-10 times. During that time I was offered two positions. One I turned down because I could not justify to myself leaving my courses half-way through

Re: [ECOLOG-L] Suggestions wanted: world's weirdest plants

2011-08-16 Thread malcolm McCallum
here is a very weird plant http://en.wikipedia.org/wiki/Triffid picture:

Re: [ECOLOG-L] Ecosystems and Energy Biofuels Homage to Principle or Deceptive Fraud?

2011-08-16 Thread malcolm McCallum
There is a reason many midwestern herpetologists refer to the region as a cornfield desert. any uniculture (trees to moss) will be essentially a desert for other organisms not directly associated with the plant. Add in the agrichemicals and you got sterile blah. On Mon, Aug 15, 2011 at 10:58

Re: [ECOLOG-L] Suggestions wanted: world's weirdest plants

2011-08-16 Thread malcolm McCallum
Seriously, the Indian Pipeno chlorophyll! http://en.wikipedia.org/wiki/Monotropa_uniflora On Tue, Aug 16, 2011 at 9:10 AM, malcolm McCallum malcolm.mccal...@herpconbio.org wrote: here is a very weird plant http://en.wikipedia.org/wiki/Triffid picture:   http://www.google.com/imgres?q

Re: [ECOLOG-L] Open peer review journal for Ecology

2011-08-16 Thread malcolm McCallum
GO to http://www.doaj.org they have a list of many open access journals. Malcolm On Tue, Aug 16, 2011 at 3:30 PM, kevina vulinec kvuli...@desu.edu wrote: For tropical ecology: http://www.tropicalconservationscience.org/ On Tue, Aug 16, 2011 at 1:36 PM, Zewei Song songze...@gmail.com wrote:

Re: [ECOLOG-L] Book on Ecological Modeling

2011-08-09 Thread malcolm McCallum
There are a number of them. Are you looking for mathematical modeling, spatial modeling, conceptual modeling, or statistical modeling. Also, are you looking for books on the modeling itself, or applications, or programs that do modeling? Biostatistical design and analysis using R is a good one.

[ECOLOG-L] professional herpetologists facebook page

2011-07-17 Thread malcolm McCallum
Hi, Craig Hassapakis put together a facebook page for herpetologists. If you are on facebook, it might be a resource that interests you. http://www.facebook.com/groups/herpetologists?notif_t=group_activity Its a closed group, so unless you are a member I don't think you can read messages. --

Re: [ECOLOG-L] lifespan Silurana tropicalis in captivity?

2011-07-09 Thread malcolm McCallum
It appears the Genus is now Xenopus tropicalis! Oops. I was given one that is 31 years old! Could that be a record for captivity? Malcolm On Thu, Jul 7, 2011 at 10:41 PM, malcolm McCallum malcolm.mccal...@herpconbio.org wrote: Hi, I'm trying to find the known maximum lifespan of Siluarana

Re: [ECOLOG-L] EcoTone: Speaking of species and their origins

2011-06-12 Thread malcolm McCallum
egrets. However, invasiveness is condition dependent and one could argue that any species can become invasive when the conditions are right. Malcolm McCallum On Sat, Jun 11, 2011 at 11:21 PM, Warren W. Aney a...@coho.net wrote: Empirical evidence is not needed when observational evidence shows

Re: [ECOLOG-L] EcoTone: Speaking of species and their origins

2011-06-11 Thread malcolm McCallum
Conservationists DO devote resources judiciously because they they have too. Conservation is grossly under-funded and under-manned. Its amazing how little gets done in environmental and public health while we throw trillions at a millitary that would still be the most dominant force in the world

Re: [ECOLOG-L] Terminology Re: [ECOLOG-L] CALL FOR AUTHORS: Biomes and Ecosystems: An Encyclopedia - Edited by Robert Warren Howarth

2011-06-09 Thread malcolm McCallum
Technically the earth is neither a biome nor an ecosystem. The living component is the biosphere, one of the four sphere's of the earth. The others being atmosphere, hydrosphere, and lithosphere. Biomes and ecosystems are subparts of the biosphere. Malcolm On Mon, Jun 6, 2011 at 11:19 PM,

Re: [ECOLOG-L] Terminology Re: [ECOLOG-L] CALL FOR AUTHORS: Biomes and Ecosystems: An Encyclopedia - Edited by Robert Warren Howarth

2011-06-09 Thread malcolm McCallum
as ecosystems. I'm still in learning mode on this . . . WT - Original Message - From: malcolm McCallum malcolm.mccal...@herpconbio.org To: Wayne Tyson landr...@cox.net Cc: ECOLOG-L@listserv.umd.edu Sent: Thursday, June 09, 2011 8:00 AM Subject: Re: [ECOLOG-L] Terminology Re: [ECOLOG-L

Re: [ECOLOG-L] Science Communication to the nonscience population Re: [ECOLOG-L] Plant

2011-06-03 Thread malcolm McCallum
and hazardous pathways, he will lift some bruised and beaten brother or sister to a higher and more noble life. Dr. Martin Luther King, Jr. --- On Thu, 6/2/11, malcolm McCallum malcolm.mccal...@herpconbio.org wrote: From: malcolm McCallum malcolm.mccal...@herpconbio.org Subject: Re: [ECOLOG-L

Re: [ECOLOG-L] Science Communication to the nonscience population Re: [ECOLOG-L] Plant

2011-06-02 Thread malcolm McCallum
and information. Malcolm McCallum On Thu, Jun 2, 2011 at 6:19 PM, Jason Hernandez jason.hernande...@yahoo.com wrote: Re: the question: Is the fact that a huge percentage of our population don't understand (or at least can't articulate) the basic mechanisms of evolution their fault or the fault

[ECOLOG-L] Fwd: [NHCOLL-L:5446] Save Ornithology at the Barrick Museum!

2011-05-23 Thread malcolm McCallum
Wow -- Forwarded message -- From: Kevin Winker kevin.win...@alaska.edu Date: Sun, May 22, 2011 at 1:29 PM Subject: [NHCOLL-L:5446] Save Ornithology at the Barrick Museum! To: Dear colleagues, The dire message below that I received from John Klicka represents a last-ditch

Re: [ECOLOG-L] Soil Moisture Meter for Sand

2011-05-13 Thread malcolm McCallum
WHy not just take core samples, store them using ASTM standard methods, then weigh the sample. Dry it, then weigh it again. the lost mass is the moisture. However, it will be the total moisture not just the capillary water. Again, there are ASTM standard methods for this as well. malcolm On

Re: [ECOLOG-L] M.S vs. M.A.

2011-04-17 Thread malcolm McCallum
In many schools there is no difference. In others, MA takes a foreign language and MS takes stats. In others, MA is a non-thesis degree (sometimes a final book report) and MS is a thesis. Combine this with the MAT (masters arts teaching), Professional Masters, and the oodles of other masters

Re: [ECOLOG-L] where do edible plants retain lead and other contaminants?

2011-04-16 Thread malcolm McCallum
Wayne brings up a good point. The bioavailability of toxic compounds, including metals is affected by many things among which pH can be one. In fact, the issue of TMDLs in the clean water act is based on problem that each stream has its own water chemistry and organic load. This causes us to

Re: [ECOLOG-L] where do edible plants retain lead and other contaminants?

2011-04-14 Thread malcolm McCallum
obout this too. Malcolm McCallum On Wed, Apr 13, 2011 at 11:20 PM, Ben Bowman bowman.benja...@gmail.com wrote: I am looking for information about where different types of plants absorb and retain heavy metals and other toxins. I would like to compile a list of edible plants that are safe

Re: [ECOLOG-L] Looking for a postdoctoral position - career options

2011-04-14 Thread malcolm McCallum
as the outcomes of your decisions will be the foundation on which you build the rest of your career. Malcolm McCallum On Thu, Apr 14, 2011 at 8:58 AM, Aaron T. Dossey bugoc...@gmail.com wrote: Biogeochemistry and geochemistry are pretty popular topics. I have seen several faculty positions

Re: [ECOLOG-L] Disseminating scientific thought to the general public: are scientists making science readily accessible?

2011-04-11 Thread malcolm McCallum
Technically, academic scientists have a specific responsibility to work for the greater good. Therefore, their 'agenda' should be for the greater good. However, in my experience you are correct that many DO NOT work for the greater good of society and the planet, but rather for their own

Re: [ECOLOG-L] Disseminating scientific thought to the general public: are scientists making science readily accessible?

2011-04-11 Thread malcolm McCallum
I don't see the problem with allowing a interviewee to read your article to ensure the quotes are accurate. In fact, it seems kind of irresponsible as a journalist not to do this. Why would you not want to make sure? I am mystified. In fact, about 10 years ago I was quoted in the St. Louis Post

Re: [ECOLOG-L] Disseminating scientific thought to the general public: are scientists making science readily accessible?

2011-04-11 Thread malcolm McCallum
I can't speak for the other studies, but I can speak on the Atrazine issue. Atrazine is an estrogen mimic. It imitates estrogen when it enters organisms. Numerous studies were published, not just by Hayes, but also others. I don't see anything sensational about his claims. In fact, you might want

Re: [ECOLOG-L] Disseminating scientific thought to the general public: are scientists making science readily accessible?

2011-04-09 Thread malcolm McCallum
Watching cable news, the closest thing to a scientist you often see is Bill Nye. Nothing against Bill Nye, but he is not a scientist and frankly is not an expertalthough he frequently plays one on TV! Malcolm On Fri, Apr 8, 2011 at 6:06 PM, David L. McNeely mcnee...@cox.net wrote: I

Re: [ECOLOG-L] Disseminating scientific thought to the general public: are scientists making science readily accessible?

2011-04-09 Thread malcolm McCallum
Having done a little unpublished research on this, people are increasingly getting their news from the internet. Albeit some of those sources may be the primary news channels and news programs, but they are not reading the newspaper or watching news programs as much. On Sat, Apr 9, 2011 at 9:59

Re: [ECOLOG-L] how to grind up A LOT of leaf litter?

2011-03-31 Thread malcolm McCallum
Go to your college's Ag major and see if they have a feed grinder for livestock. If you don't have a dept or a feed grinder, you might contact a local tractor dealer and ask if they will let you use one, either on a short term rental or lease, or if they would donate the lease-rental fee to the

[ECOLOG-L] vortex question-Tsunami Japan

2011-03-13 Thread malcolm McCallum
Hi, Anyone out there in Ecologland able to explain the vortex off the coast of Japan after the Tsunami. I am not familiar with the phenomenon and I thought someone with knowledge in this area might know how this was created and if it was likely to be a dangerous thing or just a spectacle. Thanks

Re: [ECOLOG-L] vortex question-Tsunami Japan

2011-03-13 Thread malcolm McCallum
I saw that episode. However, there are several deaths and such associated with Old Sow in Maine (I found this after one of you told me to look up Old Sow)... http://www.smithsonianmag.com/travel/journey_encounters.html http://www.smithsonianmag.com/travel/journey_encounters.htmlThen there is

Re: [ECOLOG-L] Need textbook Suggestiond

2011-03-13 Thread malcolm McCallum
I was extremely dissatisfied with Molles. It is popular among the ultra-conservatives. I inherited it in a course and half way through the semester I told the students to stop reading it and ceased assigning readings from it. I can't cite page numbers for problems because I threw my copy in the

Re: [ECOLOG-L] academia vs consultancies...- interdisciplinary ecology

2011-03-13 Thread malcolm McCallum
Professors teaching ecology SHOULD NOT be caught up teaching policy issues. Its not part of ecology, its part of a broader field-environmental science which in of itself relies on ecology but IS NOT a synonym for ecology. If someone is interested in interdisciplinary problems, they need to

Re: [ECOLOG-L] academia vs consultancies vs govt - dual degree programs

2011-03-11 Thread malcolm McCallum
procedures, and students in other programs, such as Integrative Biology, are able to take some of the courses. mcneely malcolm McCallum malcolm.mccal...@herpconbio.org wrote: Arkansas State's Environmental Sciences PHD program was originally designed with the intention to train people

Re: [ECOLOG-L] academia vs consultancies vs govt - dual degree programs

2011-03-11 Thread malcolm McCallum
Message - From: malcolm McCallum malcolm.mccal...@herpconbio.org To: ECOLOG-L@LISTSERV.UMD.EDU Sent: Thursday, March 10, 2011 7:36 PM Subject: Re: [ECOLOG-L] academia vs consultancies vs govt - dual degree programs Arkansas State's Environmental Sciences PHD program was originally

[ECOLOG-L] posting on jobs wiki

2011-03-08 Thread malcolm McCallum
Hi, for 4-5 years I have been among a group of people that keep an academic jobs wiki together for applicants to communicate. It is generally intended to be a supportive community that exchanges information about job searches. It is not a place to post vacancies, but rather a place where people

Re: [ECOLOG-L] Hypothesis Testing in Ecology

2011-03-08 Thread malcolm McCallum
Having reviewed dozens of research proposals for NSF, USGS, Delta Bay Authority, and Faculty Grant Programs at Universities I have rejected research w/o hypotheses stated when the program required hypotheses be stated. In two cases, the proposals set up LTREM sites in which data collection and

Re: [ECOLOG-L] Hypothesis Testing in Ecology

2011-03-07 Thread malcolm McCallum
If a funding agency wants hypothesis driven research, then you give them hypothesis driven research! This varies form state to state, agency to agency. Getting exploratory research funded is not easy, its much easier to get funding for confirmatory research. Malcolm On Mon, Mar 7, 2011 at 8:03

Re: [ECOLOG-L] working in academia vs govt vs consultancies

2011-03-05 Thread malcolm McCallum
seem to only be interested in how others can help them instead of them being the ones to help others (especially students) . This is just my personal experiences dealing with professors though I'm sure it's not true for all. Thank you, David Moldoff On Fri, Mar 4, 2011 at 3:08 PM, malcolm

Re: [ECOLOG-L] working in academia vs govt vs consultancies

2011-03-05 Thread malcolm McCallum
It can be, however, having taught in one program where the teaching load was 18 hrs, and in another one in which the teaching load was 12 hrs with the extra responsibilities you list far exceeding those numbers, I found the teaching, advising, and committee work stressfulbut research was a

Re: [ECOLOG-L] Hypothesis Testing in Ecology

2011-03-04 Thread malcolm McCallum
Within this thread I was reminded of another situation related to publishing individual observations and the increasing use/creation of shared databases. Why are there so many requests to create shared databases? Because people have delegated individual observations and observations with small

Re: [ECOLOG-L] Question Ecology Natural History etc Re: [ECOLOG-L] Hypothesis Testing in Ecology

2011-03-03 Thread malcolm McCallum
Maybe this was true in the 19th century, and there are still some minor outlets where observational notes with limited or no replication is accepted so you can publish the kind of observations you suggest, but modern and mainstream natural history studies require huge sample sizes and extensive

Re: [ECOLOG-L] Hypothesis Testing in Ecology

2011-03-03 Thread malcolm McCallum
There is a paper by Halliday and Jaeger published in Herpetologica some years ago that is central to this discussion. It discusses the differences between explorative and confirmative research. Most scientists spend their time doing confirmative research, which is hypothesis testing. However,

Re: [ECOLOG-L] Question Ecology Natural History etc Re: [ECOLOG-L] Hypothesis Testing in Ecology

2011-03-02 Thread malcolm McCallum
Nothing in modern studies; however, many contend that natural history is still done like back in the 19th century. If you look at those ancient papers you will find all kinds of pure speculation and things that simply could never be published today. Modern natural history, or life history

Re: [ECOLOG-L] Hypothesis Testing in Ecology

2011-03-01 Thread malcolm McCallum
. As Malcolm McCallum said if you use statistics to test a scientific hypothesis I think you are in a more shaking ground, statistics has its own problems. By the way, statistics is inductive. Some people are using information theoretic approaches like AIC (Akaike Information Criterion) to work

Re: [ECOLOG-L] Hypothesis Testing in Ecology

2011-03-01 Thread malcolm McCallum
I wonder if you mean Alpha values? p-values are what they are and only tell you how likely the relationship expressed in your statistical test is to be repeated. The alpha value is an apriori set value used in decision theory. If you set alpha to 0.05, then you state that if the p /= 0.05bla

Re: [ECOLOG-L] What do technicians do in the off season?

2011-02-14 Thread malcolm McCallum
. Aaron T. Dossey, Ph.D. Biochemistry and Molecular Biology On 2/13/2011 6:32 PM, malcolm McCallum wrote: There are only two ways to get ahead, but neither gives instant gratification... 1) keep getting more education whether it means adding courses, degrees (in same and other disciplines

Re: [ECOLOG-L] What do technicians do in the off season?

2011-02-13 Thread malcolm McCallum
There are only two ways to get ahead, but neither gives instant gratification... 1) keep getting more education whether it means adding courses, degrees (in same and other disciplines) or what. I have a phd and just finished a course on using the program R. There is always more to learn. This

Re: [ECOLOG-L] Advancing Theory Irony? Re: [ECOLOG-L] Advancing theory in biology (NSF)

2011-01-19 Thread malcolm McCallum
a tank.what would happen? There is plenty of waste in the government, and usually most of it is found in those with the most funding. Those with levels like NSF have little to waste. :) Malcolm McCallum On Tue, Jan 18, 2011 at 10:28 PM, Wayne Tyson landr...@cox.net wrote: If Steven

Re: [ECOLOG-L] Conservation or just gardening?

2011-01-18 Thread malcolm McCallum
to happen, and you need to take a course that is necessary. No point, just thoughts after reading your post. Malcolm McCallum On Mon, Jan 17, 2011 at 7:08 PM, Jason Hernandez jason.hernande...@yahoo.com wrote: This question is inspired by a conversation with a former employer. When do our

[ECOLOG-L] SCALE 1.0.3 length slicing methodology?

2011-01-13 Thread malcolm McCallum
Hi, I have a copy of SCALE 1.0.3 and I would like to do length-slicing with it. However, have found the instructions included to be rather confusing considering the rather simple appearing interface. If someone out there might have some simple, dumbed down instructions for the program or

Re: [ECOLOG-L] Red-winged Blackbird Die Off in AR....

2011-01-06 Thread malcolm McCallum
THis may be complete coincidence, but about a month ago (and I'm on the Arkansas/Texas/Louisiana/Oklahoma border) my spouse and I were commenting that it seemed like there were fewer large flocks of birds flying by our house this year. The way we take such great care of this planet, its a wonder

Re: [ECOLOG-L] Winter Ecology Labs

2011-01-05 Thread malcolm McCallum
Get hold of a winter botany book and have them identify trees WITHOUT the leaves!!! This is a very good one: http://www.amazon.com/Winter-Botany-William-Trelease/dp/0486218007 http://www.amazon.com/Winter-Botany-William-Trelease/dp/0486218007Essentially do the same lab you might have done with

Re: [ECOLOG-L] Staining glandular trichomes

2011-01-05 Thread malcolm McCallum
If these are glandular trichomes, what are they secreting? You could have a fluorescent antibody dye made to stain that specific product. Alternatively, put a grid reticle in your eyepiece to make it easier to do. Also, if you just don't have time to sit and count, maybe you could get an

Re: [ECOLOG-L] Graphing software for undergrad courses

2010-12-29 Thread malcolm McCallum
Use R, it will do any graphs you need and you are giving them the opportunity to work with a legit widely used program that everyone should use. malcolm On Wed, Dec 29, 2010 at 11:26 AM, Corbin, Jeffrey D. corb...@union.edu wrote: Hello Ecologgers - Does anyone have recommendations for

[ECOLOG-L] script for occupancy models in R

2010-12-19 Thread malcolm McCallum
Hi! I am trying to find the script for running an occupancy model in R. I know I could use one of the programs, but there are some theoretical changes i would like to play with which requires more flexibility. Any help would be great! malcolm -- Malcolm L. McCallum Managing Editor,

Re: [ECOLOG-L] quantifying leaf damage from scanned leaves

2010-12-11 Thread malcolm McCallum
Use ArcView! Just count the pixels of leaf versus missing leaf. You can actually consolidate the colors to strait out black (leaf) and white (missing leaf) then tabulate the pixels in black versus white. If you want more detailed you can use a more complex color array to indicate areas that are

Re: [ECOLOG-L] quantifying leaf damage from scanned leaves

2010-12-11 Thread malcolm McCallum
It woudl be way easier to use ArcView, almost a simple click to get numbers. 2010/12/11 Jonathan Miles Adams jonad...@snu.ac.kr: In our various leaf herbivory papers we used Sigmascan. The drawing-round damaged areas was done by hand using the mouse. It is tedious, but we preferred to keep the

Re: [ECOLOG-L] Frog tadpoles and nematodes dessinfection

2010-12-08 Thread malcolm McCallum
I would first check the fish literature and try some of their products. However, some products that might work for you but I am 100% certain have not been tested on amphibians include: Ivermectin Cydectin Moxidexin These are readily available at feed stores and farm stores for use in livestock.

Re: [ECOLOG-L] Intellectual and anti-intellectual society

2010-12-06 Thread malcolm McCallum
...@mtu.edu wrote: Could someone please explain what exactly is meant by an intellectual society? This idea seems fairly ambiguous and abstract. EAB - Original Message - From: malcolm McCallum malcolm.mccal...@herpconbio.org To: ECOLOG-L@LISTSERV.UMD.EDU Sent: Sunday, December 5

Re: [ECOLOG-L] Model Fitting and Data Quality

2010-12-04 Thread malcolm McCallum
. First, you must understand the system in which you work before you can properly interpret statistical outcomes. Malcolm McCallum On Sat, Dec 4, 2010 at 8:35 AM, William Silvert cien...@silvert.org wrote: An interesting aspect of this story is that Kepler's decision to accept the accuracy

Re: [ECOLOG-L] Help with Multiple Regression

2010-12-03 Thread malcolm McCallum
I'm not sure if I am getting your question, but if you are using multiple regression with a pile of predictors it is probably best to use either best subsets regression or stepwise regression to evaluate the predictors. If you use best subsets regression, you can examine Cp, PRESS, s, and VIF to

[ECOLOG-L] life that uses Arsenic in place of phosphorus

2010-12-02 Thread malcolm McCallum
For those who have not heard NASA today announced that research done through their exobiology program discovered a that a bacterium living in Mono Lake, California can use Arsenic in place of phosphorus. This is being pretty hyped in the news as a new form of life. I think the aspect

Re: [ECOLOG-L] Online Master's degree

2010-11-22 Thread malcolm McCallum
will be much better. Malcolm McCallum On Mon, Nov 22, 2010 at 7:13 AM, Barbara Fraser bfras...@gmail.com wrote: I completed the on-line Master's in Environmental Studies at Green Mountain College in VT this year. My situation is not the same as that of someone pursuing a science career - I am

Re: [ECOLOG-L] what makes a biology program good?

2010-11-12 Thread malcolm McCallum
. Specifically, what coursework and/or curricular experiences have people seen that best prepare students for moving into good biology-related jobs.   From: Ecological Society of America: grants, jobs, news [ecolo...@listserv.umd.edu] On Behalf Of malcolm

Re: [ECOLOG-L] what makes a biology program good?

2010-11-12 Thread malcolm McCallum
] On Behalf Of malcolm McCallum [ malcolm.mccal...@herpconbio.org] Sent: Thursday, November 11, 2010 10:16 PM To: ECOLOG-L@LISTSERV.UMD.EDU Subject: Re: [ECOLOG-L] what makes a biology program good? I didn't really have anything specific in mind regarding what you listed.  In fact, though most

[ECOLOG-L] what makes a biology program good?

2010-11-11 Thread malcolm McCallum
Hi, My brother asked this question: What standards would you use to evaluate whether a biology program is viable, good, excellent in educational quality? IT got me thinking? What do you think? -- Malcolm L. McCallum Managing Editor, Herpetological Conservation and Biology Peer pressure is

Re: [ECOLOG-L] what makes a biology program good?

2010-11-11 Thread malcolm McCallum
malcolm McCallum malcolm.mccal...@herpconbio.org wrote: Hi, My brother asked this question: What standards would you use to evaluate whether a biology program is viable, good, excellent in educational quality? IT got me thinking?  What do you think? -- Malcolm L. McCallum Managing Editor

Re: [ECOLOG-L] Oxidative stress analysis to frog homogenates

2010-11-09 Thread malcolm McCallum
Hi, I have done oxidative stress research with tads. This was preliminary work which I would like to take further (lots of directions to go). The citation is of the work was: Jones, L., D.R. Gossett, S.W. Banks, and M.L. McCallum. 2010. The effect of paraquat on the antioxidant defense system of

Re: [ECOLOG-L] ECOLOGY Fundamentals Principles Laws Other

2010-11-07 Thread malcolm McCallum
The problem with laws in ecology is that we really have not had sufficient time to develop the mathematical laws present in Physics. Ecology is a new science and it studies essentially one phenomenon in the long run (evolution), albeit in many many different contexts. I believe that physics in

[ECOLOG-L] freeware simulation visual modelling programs (like stella or simile)?

2010-11-06 Thread malcolm McCallum
Hi, are there any freeware simulate programs that operate like Stella or Simile? Thanks! -- Malcolm L. McCallum Managing Editor, Herpetological Conservation and Biology Peer pressure is designed to contain anyone with a sense of drive - Allan Nation 1880's: There's lots of good fish in the sea 

Re: [ECOLOG-L] Text book(s) on biodiversity

2010-10-16 Thread malcolm McCallum
I had my ecology class (Juniors) read E.O. Wilson's The Diversity of Life outside of class. Certainly some of the stuff is dated, but it was still really good. Malcolm On Fri, Oct 15, 2010 at 10:29 PM, Euan Ritchie euan.ritc...@jcu.edu.auwrote: Dear everyone, I will soon be teaching an

[ECOLOG-L] QGIS open software

2010-10-15 Thread malcolm McCallum
Hi, I recently started learning R and have been more impressed with it than any statistics program I have ever used. As a consequence, I was looking at QGIS as an alternative to continual updating of outrageously priced GIS software. Do any of you use this open GIS software? -- Malcolm L.

Re: [ECOLOG-L] John Kie's Home Range Tools for ArcGIS

2010-10-04 Thread malcolm McCallum
Karen, http://snr.unl.edu/powell/teaching/nres896/density_HR/nres896_links.htm There is a program called ABODE that does some of the things once done by these extensions. I hope that helps you out a bit. On Fri, Oct 1, 2010 at 9:14 PM, Karen Gaines kfgai...@eiu.edu wrote: Hi, does anyone

Re: [ECOLOG-L] errors in ecology due to bad taxonomy

2010-10-02 Thread malcolm McCallum
is, of course, of little potential to those studying climate change, eh? WT - Original Message - From: malcolm McCallum malcolm.mccal...@herpconbio.org To: ECOLOG-L@LISTSERV.UMD.EDU Sent: Thursday, September 30, 2010 9:32 AM Subject: Re: [ECOLOG-L] errors in ecology due to bad

Re: [ECOLOG-L] errors in ecology due to bad taxonomy

2010-10-01 Thread malcolm McCallum
, be led down a rocky scholarly path in a region where two radically different geofloras collide, a super-ecotone for want of a better term. This kind of phenomenon is, of course, of little potential to those studying climate change, eh? WT - Original Message - From: malcolm McCallum

Re: [ECOLOG-L] errors in ecology due to bad taxonomy

2010-09-30 Thread malcolm McCallum
Tigard, Oregon -Original Message- From: Ecological Society of America: grants, jobs, news [mailto:ecolo...@listserv.umd.edu] On Behalf Of malcolm McCallum Sent: Wednesday, 29 September, 2010 15:00 To: ECOLOG-L@LISTSERV.UMD.EDU Subject: Re: [ECOLOG-L] errors in ecology due to bad taxonomy

Re: [ECOLOG-L] FW: [ECOLOG-L] Statistics Book for Ecologist

2010-09-29 Thread malcolm McCallum
I have a copy of Biostatistical design and analysis using R by Murray Login. I have not gone deep into the book yet, but superficially it seems pretty useful. Malcolm 2010/9/28 vickey Chen vickeyc...@msn.com: Hi!  Apurba I  currently used Spatial Analysis: A Guide for Ecologists (Fortin

[ECOLOG-L] errors in ecology due to bad taxonomy

2010-09-29 Thread malcolm McCallum
If you have not read this paper yet, you should!!! See below... ERROR CASCADES IN THE BIOLOGICAL SCIENCES: THE UNWANTED CONSEQUENCES OF USING BAD TAXONOMY IN ECOLOGY 2008. Ambio 37(2): 114-118 Alejandro Bortolus Abstract: Why do ecologists seem to underestimate the consequences of using bad

Re: [ECOLOG-L] errors in ecology due to bad taxonomy

2010-09-29 Thread malcolm McCallum
? If so, how does the non-taxonomist distinguish between them? And, is there a sliding scale of quality between those extremes? What is a species? (Pers. comm., Karen Sausman, ca 1966) It's still a good question. - Original Message - From: malcolm McCallum malcolm.mccal...@herpconbio.org

Re: [ECOLOG-L] primary literature for undergrad limnology course

2010-09-11 Thread malcolm McCallum
Forbes, Stephen. 1887. The lake as a Microcosm http://openlibrary.org/books/OL178804M/lake_as_a_microcosm http://openlibrary.org/books/OL178804M/lake_as_a_microcosmAre you restricting this to lakes??? Some folks teach it as aquatic ecology rather than restricting it to lakes and ponds. Malcolm

[ECOLOG-L] how to install WiSP on R

2010-08-26 Thread malcolm McCallum
Thanks to all who responded. You use the pulldown menu's instead of the text to install the package in R. Anyone gets in the spot I was in, email and I'll explain! Malcolm -- Malcolm L. McCallum Managing Editor, Herpetological Conservation and Biology Peer pressure is designed to contain anyone

[ECOLOG-L] Powdermill Nature Reserve important!!

2010-08-26 Thread malcolm McCallum
I have recently become aware that Carnegie Museum trustees are currently considering allowing gas wells in the Powdermill Nature Preserve. (article: http://www.pittsburghlive.com/x/pittsburghtrib/news/westmoreland/s_696394.html) For those of you who are unfamiliar with PNR, here is a link:

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