Genetic information and RM (data types and structures)

2003-05-15 Thread Koray Atalag
own attributes, methods and constraints right into the RM because with this speed of biologic evolution I don't think the genetic code and concepts are going to change for a couple million years! Best regards, Koray Atalag - If you have any questions about using this list, please send a message

Flavour of null

2005-04-10 Thread Koray Atalag
and provide mappings to the essential ones. That is my simple solution proposal that I had been deeply thinking on for some years! Best regards, Dr. Koray Atalag METU Informatics Institute Ph.D. Candidate on Information Systems -Original Message- From: owner-openehr-techni...@openehr.org

Inclusion of bibliographic references into Archetypes

2005-10-27 Thread Koray Atalag
Dear All, When dreaming about future Medical ICT systems with decision assistance on the fly (Star Trek Syle!) I had the idea of including some PUBMED pointers/references (PMID) directly inside archetypes. The reason is simple; the simplest decision assistance (by the way my thesis advisor has

ontology, information models, archetypes - a perspective

2006-01-06 Thread Koray Atalag
Hi, I have not been receiving messages from any of the openehr lists since 2 months! Could you please check this? thanks... -koray --- Gerard Freriks gfrer at luna.nl wrote: Thomas, Thanks. What you are saying is: - we have the real and other worlds with objects and our present

difficulties starting an implementation

2006-01-17 Thread Koray Atalag
...But I do not have any idea how it will solve this problem...Maybe we can start another discussion on the Templates approach. Best regards, Dr. Koray Atalag -Original Message- From: owner-openehr-technical at openehr.org [mailto:owner-openehr- technical at openehr.org] On Behalf

difficulties starting an implementation

2006-01-19 Thread Koray Atalag
Telematics World Health Organisation Geneva, Switzerland The pdf is at: http://www.saglik.gov.tr/eng/turkeyehealth_bu.pdf Best regards, Dr. Koray Atalag -Original Message- From: owner-openehr-technical at openehr.org [mailto:owner-openehr- technical at openehr.org] On Behalf

Value or Null_Flavor in CLUSTERs?

2007-02-03 Thread Koray Atalag
Hi, I know that this is probably something very inappropriate but I happened to need such a solution. An example: CLUSTER [] CLUSTER [] Some type of finding (a lesion: ulcers) ELEMENT [] A Feature of the finding (i.e. bleeding) v: some value

Value or Null_Flavor in CLUSTERs?

2007-02-13 Thread Koray Atalag
Hi Sam, Thanks for your (always) kind answer...My comments reply is below Sam Heard wrote: Hi Kory You can have an empty clusterif you want to say why it is empty then use null flavor on one or more of the possible elements. Yes this is exactly what can be done now...But when starting

Problem in some sample archetypes and questions

2007-01-07 Thread Koray Atalag
Hi to all, While revising my MST archetypes, I came across some confusion on the use of cardinality and occurences. And when I reread ADL 1.4 and ADL2, inspected the sample archetypes and then created new ones with Archetype Editor and also tested with the Workbench my confusion got even more

Problem in some sample archetypes and questions

2007-01-08 Thread Koray Atalag
Sam Heard wrote: Thanks Koray Your expression of cardinality and occurrences is exactly correct - there are clearly some errors in the archetypes. The only reason to limit cardinality in the archetype is to force a choice when there are more than one child e.g. container x with

Problem in some sample archetypes and questions

2007-01-08 Thread Koray Atalag
Stap, R.E. (Roel) wrote: Hello Koray, Reading your issues around cardinallity, perhaps you can solve this issue with help of constrains/business rules. E.g. if you consider in the Archetype model the ability to have a cardinality between A and B of (0..N), you can constrain practically

Congraturation to our new Web site

2007-11-03 Thread Koray Atalag
Hi, I also want to put some words here...For too long, compared to the quality of the work done here, openEHR Website was just lagging a lot behind...During many times when I gave some presentation or in meetings with interested people and showed openEHR Website, I visualized some expressions

Further value constraints: in Archetypes or Templates?

2007-10-30 Thread Koray Atalag
implementations. Best regards, Koray Atalag, MD, Ph.D.

Multiple parents and max number of nested specialized archetypes?

2007-10-16 Thread Koray Atalag
conform to multiple parents...In my opinion this is perfectly possible. So what happens? The other question is whether ADL or other limits the number of specializations. Best regards, Koray Atalag, MD, Ph.D. Freelance consultant and developer http://koray.pathos-web.org skype: atalagk

Formal methods for Evaluation of Interoperability Maintainability?

2008-02-06 Thread Koray Atalag
Hi, I want to learn how we can formally/objectively prove that Archetype based dual level development formalism alleviates problems of interoperability and maintainability. I was wondering if someone did or know of any such study which applies formal validation methods? Best regards, Koray

Formal methods for Evaluation of Interoperability Maintainability?

2008-02-07 Thread Koray Atalag
regards, Koray Atalag, MD, Ph.D. ___ openEHR-technical mailing list openEHR-technical at openehr.org http://lists.chime.ucl.ac.uk/mailman/listinfo/openehr-technical -- OceanC_small.png Dr Sam Heard Chief Executive Officer Ocean

Formal methods for Evaluation of Interoperability Maintainability?

2008-02-11 Thread Koray Atalag
but if we can get this straight perhaps we can express comfortably that a two-level app beats a single level app 7x in maintainability and 5x interoperability. Or beats 2x HL7 system in maintenance but is beaten 2x in interoperablity. Perhaps I am being too naive but it is worth trying. Koray Atalag

Formal methods for Evaluation of Interoperability Maintainability?

2008-02-11 Thread Koray Atalag
to collaborate in the future, which is fabulous. I'll be in touch Cheers Juanita Koray Atalag wrote: Hi Juanita and others, It would be a great research topic and I think one that is needed very badly from openEHR community. If I manage to find an appropriate research position, this would

Formal methods for Evaluation of Interoperability Maintainability?

2008-02-12 Thread Koray Atalag
interest we can continue on the wiki. -koray Gerard Freriks wrote: Koray, What metrics do you want to define? Gerard On Feb 11, 2008, at 10:40 AM, Koray Atalag wrote: Dear All, I started this thread to get some feedback for finding methods/metrics to test validate maintainability

[Fwd: [JIRA] Created: (SPEC-302) Translations embedded in the ADL are not efficient and should instead use 'gettext' catalogs.]

2009-04-29 Thread Koray Atalag
-- Koray Atalag, MD, Ph.D Clinton Bedogni Research Fellow The University of Auckland, Department of Computer Science, Private Bag 92019, Auckland 1142, New Zealand Tel: +64 (9) 373 7599 ext. 87199 Fax: +64 (9) 308 2377 Email: koray at cs.auckland.ac.nz Tim Cook wrote: Hi All, I raised

openEHR community on Google Wave

2009-12-03 Thread Koray Atalag
Hi All, I don't understand how the terms vendor lock-in, behind doors etc. are associated with Ocean - I see it as a social service organisation rather than a commercial entity by the way :P Interesting times ;) Though I am hoping that we can identify the underlying reasons why some of us

Implicit semantics within Archetypes?

2009-02-19 Thread Koray Atalag
Hi, I think ADL has proved to be a pretty good knowledge modelling language and that the growing number of archetypes represents a good deal of clinical knowledge. What is lacking is the ability to define relationships and their types between nodes or even nodes in other archetypes. I don't

More expressivity needed

2009-07-22 Thread Koray Atalag
if you think this is useful. Cheers, -koray -- Koray Atalag, MD, Ph.D Clinton Bedogni Research Fellow The University of Auckland, Department of Computer Science, Private Bag 92019, Auckland 1142, New Zealand Tel: +64 (9) 373 7599 ext. 87199 Fax: +64 (9) 308 2377 Email: koray

More expressivity needed

2009-07-28 Thread Koray Atalag
= [at] = at Hope I am not pushing too far ;) Any feedback from implementers? Cheers, -koray Thomas Beale wrote: Koray Atalag wrote: Hi All, I have a use case which I am having quite hard time to model. The thing is in fact very simple to express with a tabular list

informal poll: openEHR conference

2009-11-29 Thread Koray Atalag
Hi Tom, having such a social get together would be very niceI'd vote for Amsterdam :) Cheers, -koray From: openehr-technical-bounces at chime.ucl.ac.uk [openehr-technical-bounces at chime.ucl.ac.uk] On Behalf Of Thomas Beale

Rong Chen PhD thesis online

2009-12-01 Thread Koray Atalag
Well done Rong - you fully deserved the degree :) Cheers, -koray -Original Message- From: openehr-technical-bounces at chime.ucl.ac.uk [mailto:openehr-technical-boun...@chime.ucl.ac.uk] On Behalf Of Thomas Beale Sent: Tuesday, 1 December 2009 3:07 p.m. To: Openehr-Technical; For

CKM Icons

2009-10-22 Thread Koray Atalag
Hi All, I remember Ian doing some work on the set of icons for the purpose of using in mindmaps...I wonder if they can be reused. Any idea Ian? Cheers, -koray From: openehr-technical-bounces at openehr.org [mailto:openehr-technical-boun...@openehr.org] On Behalf Of Lisa Thurston Sent:

Documentation Desparation

2009-09-26 Thread Koray Atalag
Hi All, I really appreciate the mental exercise to achieve a better documentation; however I must say I am really surprised to watch the recent discussions like this one because I wonder if we, as a community yet to solve many fundamental problems and overcome the many challenges, have enough

Documentation Desparation

2009-09-28 Thread Koray Atalag
) specification on openEHR.org is authorative. I think the OP was pointing into this direction, and not a multi-million resource-intensive translation process. From-the-pitfalls-yours, Roger On Sat, Sep 26, 2009 at 03:23, Koray Atalag koray at cs.auckland.ac.nz mailto:koray at cs.auckland.ac.nz

GUI-directives/hints again (Was: Developing usable GUIs)

2010-12-02 Thread Koray Atalag
Hi All, late to respond but here are a few thoughts: - While having ?another layer? of modelling to handle presentation I think we already have enough of those layers. I believe the common sense of doing this will be to sort out the GUI Directives stuff we all have come up with and

GUI-directives/hints again (Was: Developing usable GUIs)

2010-12-10 Thread Koray Atalag
Sorry forgot Thilo's paper info: 1. Schuler T, Garde S, Heard S, Beale T. Towards automatically generating graphical user interfaces from openEHR archetypes. Stud Health Technol Inform 2006;124:221-6. Cheers, -koray From: openehr-technical-bounces at openehr.org

GUI-directives/hints again (Was: Developing usable GUIs)

2010-12-14 Thread Koray Atalag
Thanks Thile, didn't have this paper before - will read now with much pleasure :) Hong Yul and I had a long discussion yesterday and will prepare a joint response today or tomorrow (well NZ time of course!). Especially Tom has asked whether we have any issues which might need to go into

GUI-directives/hints again (Was: Developing usable GUIs)

2010-12-15 Thread Koray Atalag
Thanks a lot Helma - lots of reading material for Xmas! Cheers, -koray -Original Message- From: openehr-technical-bounces at openehr.org [mailto:openehr-technical-boun...@openehr.org] On Behalf Of hepabolu Sent: Wednesday, 15 December 2010 8:58 a.m. To: For openEHR technical

GUI-directives/hints again (Was: Developing usable GUIs)

2010-12-16 Thread Koray Atalag
, Koray Atalag wrote: Hi Tom, I agree that the this is best way how to ?represent? data technically. But what I suggest is, since this is a universal and repeating pattern for all clinical findings (and maybe more) can?t we have an extension in ADL such that we ?tag? a certain sub-tree

Fw: Interoperability with HL7

2010-02-11 Thread Koray Atalag
Hi All, interesting discussions but I am afraid it does not take use anywhere... Yes we all need (we=all of us) some better means to develop health information systems; not only limited to EHR space but the whole continuum including the long waited clinical applications which would help doctors

Setting up a common publication/resource library for openEHR

2010-02-15 Thread Koray Atalag
Hi All, Whenever I start with a paper, report or presentation I find myself doing the same literature search and environment scan...And can only find the ones that I can or allowed to access. I am pretty sure this is the case for many of you out there. The current publications page on openEHR

Setting up a common publication/resource library for openEHR

2010-02-16 Thread Koray Atalag
. They have sufficient clout to make it happen (they are the skype people) Some of the papers unfortunately cannot be made available on the openEHR website due to copyright limitations - depends on the journal (and sometimes the time passed since publication) Cheers Sebastian Koray Atalag

What does Add reference in Archetype Editor means

2010-07-06 Thread Koray Atalag
Privet Igor, this simply creates an internal reference to that node which you can reuse in upcoming parts of the same archetype. Of course the at code at the very end is referring to the same term_id. But the paths are difference depending on where it is referenced. Look at the 'internal

Medinfo 2010 openEHR tutorial collision

2010-05-17 Thread Koray Atalag
Resending as plain text - bounced back due to file size when I replied - Hi, so it looks we are definitely going to have the clinical modelling workshop on Saturday. Looking at the discussions between Tony and Heather I note that there is an agreement on finishing up the workshop by

Governance of terminology lists

2010-05-25 Thread Koray Atalag
Hi Ian, I guess this topic is not of great interest at the moment :( It's be great to have feedback though...Perhaps I'll discuss this offline. Cheers, -koray From: openehr-technical-bounces at openehr.org [mailto:openehr-technical-boun...@openehr.org] On Behalf Of Ian McNicoll Sent: Monday,

Could YAML replace dADL as human readable AOM serialization format?

2011-12-06 Thread Koray Atalag
Yeah I was also wondering what is the driver/motivation/aspiration behind using JSON, YAML etc. instead of good old ADL? Is this to do with making openEHR easier to digest for the 'traditional' IT community because perhaps they don't want to let go everything at once and leverage some existing

Could YAML replace dADL as human readable AOM serialization format?

2011-12-08 Thread Koray Atalag
, Koray Atalag k.atalag at auckland.ac.nzmailto:k.atalag at auckland.ac.nz wrote: Yeah I was also wondering what is the driver/motivation/aspiration behind using JSON, YAML etc. instead of good old ADL? Good old which ADL? Please go back in the thread and note the difference between dADL and cADL

open source openEHR-related EHR systems; How do you want to be cited...

2011-12-12 Thread Koray Atalag
Hi Erik, I suggest using this one: 1. Atalag K, Yang HY, Tempero E, Warren J. Model Driven Development of Clinical Information Systems using openEHR. Stud Health Technol Inform 2011;169:849-853.[cited 2011 Oct 27 ] Many thanks! -koray From: openehr-technical-bounces at openehr.org

13606 revisited - list proposal

2011-12-16 Thread Koray Atalag
+1 BTW in an ideal world the 13606-openEHR divergence shouldn't have happened in first place. I seriously think we can't afford to fall apart and go our own ways. But never mind... -koray -Original Message- From: openehr-technical-bounces at openehr.org

Representing binary values with DV_BOOLEAN

2011-02-02 Thread Koray Atalag
Is much different to change the field from 'test result:positive/negative' to 'test result positive:true/false'? If the semantics if not the same then the 'positive/negative' has more meaning that a simple boolean and I think they should be coded 2011/2/2 Koray Atalag k.atalag at auckland.ac.nz

CCR model

2011-07-11 Thread Koray Atalag
Hi All, I need CCR model ASAP. has anyone worked on this. Possible to share? Cheers, -koray

FW: [openhealth] OpenGALEN and OpenEHR

2011-07-03 Thread Koray Atalag
Many of you probably got this but ... From: openhealth at yahoogroups.com [mailto:openhea...@yahoogroups.com] On Behalf Of fred trotter Sent: Sunday, 3 July 2011 5:40 p.m. To: openhealth at yahoogroups.com Subject: [openhealth] OpenGALEN and OpenEHR Hi, This list (openhealth) has been

Sample OpenEHR records

2011-03-03 Thread Koray Atalag
Hi Diego, was on travel so just reckoned this...Yes we do have instances, but probably quite odd. It is made up of a very detailed endoscopy report serialised as XML. I'll ask Hong Yul, the technical hero behind it, to send a few examples to you. HYY?? Cheers, -koray -Original

GUI stuff in AOM/ADL? (Was: future ADL-versions)

2011-03-29 Thread Koray Atalag
Subject: Re: GUI stuff in AOM/ADL? (Was: future ADL-versions) On 25/03/2011 03:05, Koray Atalag wrote: Hi Eric, good points...As you may remember we had this discussion on this list not so long ago and I don?t remember any action taken after that. I guess we should take lead and come up

New Zealand's Interoperability Reference Architecture is out - open for public comment

2011-05-19 Thread Koray Atalag
Hi Folks, This is a chance to openly view NZ's national (still draft though) reference architecture for interoperability. Underpinned by DCM - well practically archetypes (13606/openEHR), we suggest the use of numerous standards together in a pragmatic way. CDA, IHE and especially SOA is

FW: New Zealand's Interoperability Reference Architecture is out - open for public comment

2011-05-19 Thread Koray Atalag
Didn't seem to appear on technical list - resending. Sorry for cross-post Cheers, -koray From: openehr-clinical-bounces at openehr.org [mailto:openehr-clinical-boun...@openehr.org] On Behalf Of Koray Atalag Sent: Thursday, 19 May 2011 12:37 p.m. To: For openEHR clinical discussions

Unable to express an unit of measurements in UCUM syntax

2011-05-26 Thread Koray Atalag
Hmm, haven't had a chance to read the full thread but does this mean I can also represent Gauge as a Quantity unit (which is not part of openEHR terminology) similarly? Cheers, -koray -Original Message- From: openehr-technical-bounces at openehr.org

translating the openEHR website [From Gunnar Klein]

2012-12-30 Thread Koray Atalag
Hi, Pablo I remember having similar discussions within our Localisation Program group some time ago. While I tend to agree that dealing with domain names etc. is not of high priority right now, nevertheless we need some principles and guidance. Obviously this is a major issue we need to be

Meaningful Use and Beyond - O'Reilly press - errata

2012-02-20 Thread Koray Atalag
Hi Fred, Apropos to Tom I'd say openEHR is also equally to do with software maintainability; thanks to the dual or multi-level modelling and model driven development. This is my main research area as well as open source software. I agree with Tom's comments that being open source by itself is

open source openEHR-related EHR systems; How do you want to be cited...

2012-01-06 Thread Koray Atalag
Hi Eric, we started GastrOS in SourceForge but then used CodePlex (don't ask me why!). The correct URL is: http://gastros.codeplex.com Happy 2012 to you all J Cheers, -koray From: openehr-technical-bounces at openehr.org [mailto:openehr-technical-boun...@openehr.org] On Behalf Of

pass_through attribute in ADL 1.5

2012-01-09 Thread Koray Atalag
Hi Tom and Diego, Short response is yes this is a better way of hardwiring a pure presentation related attribute into Archetypes which are supposed to deal with meta-data, structure and semantics of information only. The ideal solution would be to have an accompanying (but separate) layer of

openEHR mailing lists - moving

2012-01-20 Thread Koray Atalag
Hi Tom, I used SourceForge before to host projects (yes that's correct not just software development but collaborative project sites) in past which offers for free lists and many more, such as Web pages, SVN/Mercurial, blog and Wiki and many more. I reckon the licensing might be an issue for

Constraints on displaying

2012-07-19 Thread Koray Atalag
Hi, As I understand this is an issue related with semantics rather than presentation as it reads. Therefore I'd say you'd define the rule in Invariant/Rules section of the Archetype (I might be wrong with the naming though). But as we go into real implementations some dodgy things start to

lessons from Intermountain Health, and starting work on openEHR 2.x

2012-10-04 Thread Koray Atalag
Hi Gerard, I think getting the content model is absolutely right - no one can argue But with due respect I disagree with you about the difference. I seriously think standards defining clinical content should converge (not even harmonise). I had the privilege of spending some time with Ed Hammond

lessons from Intermountain Health, and starting work on openEHR 2.x

2012-10-07 Thread Koray Atalag
in systems. This is the responsibility of the industry in all circumstances. Gerard Freriks +31 620347088 gfrer at luna.nlmailto:gfrer at luna.nl On 4 Oct 2012, at 02:02, Koray Atalag wrote: Hi Gerard, I think getting the content model is absolutely right - no one can argue But with due respect I

Are you doing an academic project using openEHR?

2012-03-23 Thread Koray Atalag
Hi Tom, we're here: http://gastros.codeplex.com/ Country: New Zealand Institution: The University of Auckland, National Institute for Health Innovation Team: Koray Atalag, Hong Yul Yang Project Description GastrOS is an endoscopic reporting application based on open standards

Tooling support for ADL1.5 and beyond

2012-05-29 Thread Koray Atalag
Hi All, Sorry if this has been addressed before but I was wondering where we are at the moment wrt to developing clinically usable tooling for ADL 1.5 etc. I'm wondering if this is in the roadmap of other groups, not just Ocean? Cheers, -koray -- next part --

HL7 opens up

2012-09-05 Thread Koray Atalag
So then all they have to do is to create as good stuff as openEHR does ha ;) Don't tell this - I'm a board member of HL7 NZ :) I'd like to see this as a big step towards 'consolidation' of eHealth standards (heard from Ed when he was here and agree)...I don't believe in harmonisation as neither

Recording absence of (clinical) information

2013-07-15 Thread Koray Atalag
been dealt with - I haven't been able to read all discussions for a while. Cheers, -koray Koray Atalag, MD, PhD, FACHI Senior Research Fellow Description: Description: Description: cid:image001.png at 01CD2460.A69C1680 School of Population Health, The University of Auckland Private Bag

Help needed: what's out there? medication list, allergies and adverse reactions

2013-06-04 Thread Koray Atalag
, ?s 8:16 PM, Koray Atalag k.atalag at nihi.auckland.ac.nzmailto:k.atalag at nihi.auckland.ac.nz escreveu: Hi All, As you may already know New Zealand have decided to used openEHR Archetypes for modelling an Exchange Content Modelhttp://www.ithealthboard.health.nz/content/health-information

openEHR Subversion = Github move progress

2013-05-03 Thread Koray Atalag
Hey that?s really awesome! Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Roger Erens Sent: Saturday, 13 April 2013 11:44 a.m. To: For openEHR technical discussions Subject: Re: openEHR Subversion = Github move progress Hey

Archetypes at OMG

2013-05-30 Thread Koray Atalag
Hi Tom, this is an exciting thing. OMG sets the standards for sure... Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Thomas Beale Sent: Wednesday, 22 May 2013 10:07 a.m. To: Openehr-Technical Subject: Archetypes at OMG Some of

Ocean's Template Designer and allowedType rules

2013-11-19 Thread Koray Atalag
Hi folks, We used opt to feed in the model to software, especially the GUI generator in GastrOS. We added a few GUI Directives to get the desired looks... I reckon the new version of TD now supports those directives :) For those interested it is open source at: http://gastros.codeplex.com

Exchanging data

2013-10-17 Thread Koray Atalag
Hi Mate ? and also mate as people often greet each other in New Zealand J Well done with all the great work ? which sounds very impressive. I?m particularly interested in the ?Register of registers? concept ? can you please elaborate on this? A PhD candidate of mine is planning to establish

Problem-oriented records and querying by problem

2014-11-26 Thread Koray Atalag
Sorry I meant I don't think 'natural order' (as in DMBS) of an EHR can be of POMR type Cheers, -koray From: Koray Atalag Sent: Wednesday, 26 November 2014 9:52 p.m. To: 'For openEHR technical discussions' Subject: RE: Problem-oriented records and querying by problem Hi All

How to model relationship between archetypes?

2014-10-31 Thread Koray Atalag
Interesting - reposting this as my University has changed reply-to address so lists haven't been accepting my posts. Funny that I am only aware of this as Outlook places sent mail under that thread nicely - makes you think it's actually posted by the list manager! Cheers, -koray From: Koray

Texts about transforming between openEHR and other formalisms

2014-10-31 Thread Koray Atalag
publicly. Cheers, -koray From: Koray Atalag Sent: Friday, 26 September 2014 9:58 a.m. To: For openEHR technical discussions Cc: For openEHR clinical discussions Subject: RE: Texts about transforming between openEHR and other formalisms Thanks Diego - that's an impressive list. This reminded me

Any prep for MIE 2015 in Madrid?

2014-10-31 Thread Koray Atalag
Hi, I was just wondering if there's any activity planned for MIE 2015http://www.mie2015.es/ in next May - the deadline for submissions has just been extended: Deadline for Papers and Posters (indexed) is extended to November 17th, 2014 Deadline for Workshops, Panels, Special events

SNOMED-CT postcoordination support in ADL

2015-04-28 Thread Koray Atalag
Hi Diego, We?re intending to use the IHTSDO syntax (or the idea) for semantic annotation of computational physiology models - using other domain specific languages like CellMLhttp://www.cellml.org/, FieldMLhttp://physiomeproject.org/software/fieldml/about, SBML etc. There are semantic tools

RE: openEHR @ StackExchange

2015-05-25 Thread Koray Atalag
One needs at least 1500 reputations to introduce a new tag (obviously openEHR doesn't exist yet). Cheers, -koray -Original Message- From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Thomas Beale Sent: Monday, 25 May 2015 11:41 p.m. To:

RE: CKM for training purposes

2015-07-28 Thread Koray Atalag
+1 pls Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Heather Leslie Sent: Monday, 20 July 2015 8:14 p.m. To: For openEHR implementation discussions; For openEHR implementation discussions; For openEHR technical discussions Subject:

RE: Archetype editor, CKM and v0 v1

2015-08-09 Thread Koray Atalag
+1 Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Bakke, Silje Ljosland Sent: Friday, 7 August 2015 8:07 p.m. To: For openEHR technical discussions Subject: RE: Archetype editor, CKM and v0 v1 I'm assuming there's no reaction to this

RE: [FORGED] Nation wide EHR project by openEHR/ISO13606 got fund in Japan.

2015-10-12 Thread Koray Atalag
Dear Shinji, big congrats to you…Perseverance and hard work wins finally. Let us know how best to support you (other than a virtual toast ;) Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Shinji KOBAYASHI Sent: Friday, 9 October 2015

Maven Archetype – About

2015-11-12 Thread Koray Atalag
http://maven.apache.org/archetype/ Interesting definition (though not related to our models) Cheers, -koray ___ openEHR-technical mailing list openEHR-technical@lists.openehr.org

RE: Advantage of ISO

2015-09-03 Thread Koray Atalag
I think Silje’s explanation is crystal clear on this matter – so what exactly your problem is Gerard with openEHR? Can you give a concrete example where other SDOs you mention are better placed wrt to freedom? Cheers, -koray From: openEHR-technical

RE: EHRServer v0.4 released

2015-11-30 Thread Koray Atalag
Well done Pablo – a PhD student of mine and also a colleague will be playing with it shortly. Will definitely feed back! Keep up the great work ☺ Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of pazospa...@hotmail.com Sent: Sunday, 29

RE: New EHRServer v0.5 and roadmap

2016-01-14 Thread Koray Atalag
Hi Pablo, the guide is very readable and to the point. Well done. I'll definitely play around in the next few days. Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of pablo pazos Sent: Friday, 15 January 2016 4:12 p.m. To: openeh technical

Strange use of 'offset' as a settable RM attribute

2016-02-11 Thread Koray Atalag
Hi, We noted it is possible to set values from AE/TD to a RM attribute named "offset" In the specs (looked at >1.0.1) it is not a regular attribute but a function which returns a computed

RE: [FORGED] A report of openEHR events in Japan

2016-02-04 Thread Koray Atalag
Big congrats to you Shinji and others who put this fantastic event together. Cheers, -koray -Original Message- From: openEHR-clinical [mailto:openehr-clinical-boun...@lists.openehr.org] On Behalf Of Shinji KOBAYASHI Sent: Thursday, 4 February 2016 3:47 a.m. To: For openEHR clinical

RE: [FORGED] Re: [FORGED] Re: Representing microseconds in DateTime

2016-02-02 Thread Koray Atalag
Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Bert Verhees Sent: Tuesday, 2 February 2016 11:18 p.m. To: For openEHR technical discussions Subject: [FORGED] Re: [FORGED] Re: Representing microseconds in DateTime On 02-02-16 11:07, Koray Atalag

RE: [FORGED] Re: Representing microseconds in DateTime

2016-02-02 Thread Koray Atalag
. I don't have the original standard at hand, but Wikipedia says: https://en.wikipedia.org/wiki/ISO_8601 There is no limit on the number of decimal places for the decimal fraction. Bert On 02-02-16 10:51, Koray Atalag wrote: Hi, I have a requirement to capture timeseries data which happens

RE: Representing microseconds in DateTime

2016-02-02 Thread Koray Atalag
ss' as an arbitrary indicator of fractional seconds (how many 's' do you want ;-) - thomas On 02/02/2016 09:51, Koray Atalag wrote: Hi, I have a requirement to capture timeseries data which happens at 250 microseconds - that is 0.000250 seconds. While many programming languages, and the IS

Representing microseconds in DateTime

2016-02-02 Thread Koray Atalag
Hi, I have a requirement to capture timeseries data which happens at 250 microseconds - that is 0.000250 seconds. While many programming languages, and the ISO8601 spec, supports this openEHR RM seems to

RE: Strange use of 'offset' as a settable RM attribute

2016-02-15 Thread Koray Atalag
3mNUvbAjT2R5Sm1DdFZYTU0=download] Co-Chair, openEHR Foundation ian.mcnic...@openehr.org<mailto:ian.mcnic...@openehr.org> Director, freshEHR Clinical Informatics Ltd. Director, HANDIHealth CIC Hon. Senior Research Associate, CHIME, UCL On 12 February 2016 at 04:29, Koray Atalag <k.ata...@auckland

RE: [FORGED] Re: Strange use of 'offset' as a settable RM attribute

2016-02-16 Thread Koray Atalag
r: @ianmcnicoll [Image removed by sender.] Co-Chair, openEHR Foundation ian.mcnic...@openehr.org<mailto:ian.mcnic...@openehr.org> Director, freshEHR Clinical Informatics Ltd. Director, HANDIHealth CIC Hon. Senior Research Associate, CHIME, UCL On 12 February 2016 at 04:29, Koray Atalag <k.

RE: Strange use of 'offset' as a settable RM attribute

2016-02-17 Thread Koray Atalag
Thanks Tom - this could finally make me an ADL Workbench user ;) Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Thomas Beale Sent: Thursday, 18 February 2016 12:01 a.m. To: openehr-technical@lists.openehr.org Subject: Re: Strange use of

RE: [FORGED] Re: [FORGED] Re: Representing microseconds in DateTime

2016-02-02 Thread Koray Atalag
Of Bert Verhees Sent: Tuesday, 2 February 2016 11:18 p.m. To: For openEHR technical discussions Subject: [FORGED] Re: [FORGED] Re: Representing microseconds in DateTime On 02-02-16 11:07, Koray Atalag wrote: Hi Bert, I was saying ISO8601 do support this - it is openEHR that constrains to milliseconds

RE: Socio-technical challenges when the openEHR approach is put to use in Norwegian hospitals

2016-03-14 Thread Koray Atalag
That's great call - many thanks Cheers, -koray -Original Message- From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Ian McNicoll Sent: Tuesday, 15 March 2016 1:55 a.m. To: For openEHR technical discussions Subject: Re: Socio-technical challenges

RE: CAMSS assessment of openEHR

2016-04-11 Thread Koray Atalag
Ditto - the main problem is that while we appreciate the important and complementary roles of clinical terminology, information models and health information exchange specifications (which should normally be created as downstream artefacts from the broader whole of 'EHR' content models for the

Any work on PHR?

2016-03-06 Thread Koray Atalag
Hi, are you aware of any openEHR based personal health record project? The aim would be to capture wellness type of information integrated with recent wearable/smart phone based sensor data. Preferably open source. Cheers, -koray ___

RE: SNOMED

2016-05-01 Thread Koray Atalag
Hi, Just to add some historical context - SNOMED evolved from a terminology designed to be a Reference Terminology (as opposed to Interface/Clinical Terminology) at a time where ontologies were non existent or very primitive (<90s). Hence the poor formal ontological commitment as of today - in

RE: Terminology bindings ... again

2017-07-19 Thread Koray Atalag
Hi Tom, I think min_version can be problematic as certain terms can be deprecated in future versions and then this naming could be misleading. That said for SNOMED it’ll still be present in future releases just marked as inactive. For other terminologies this cannot be guaranteed. BTW SNOMED

RE: [FORGED] Re: A little community coordination

2017-05-21 Thread Koray Atalag
Hi Pablo, great initiative! I’ve filled my response…Looking forward to seeing results Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun...@lists.openehr.org] On Behalf Of Pablo Pazos Sent: Sunday, 21 May 2017 10:46 a.m. To: For openEHR technical discussions Subject:

RE: SNOMEDCT - correct representation

2017-05-03 Thread Koray Atalag
...@lists.openehr.org] On Behalf Of Koray Atalag Sent: Tuesday, 2 May 2017 11:47 p.m. To: For openEHR technical discussions Subject: [FORGED] RE: SNOMEDCT - correct representation Yup - that's the right URI format. Cheers, -koray From: openEHR-technical [mailto:openehr-technical-boun

RE: SNOMEDCT - correct representation

2017-05-06 Thread Koray Atalag
Hi Michael, You can only define and manage so many ECL valuesets and assign URIs - which is fine. Trouble is the combinations are endless. Therefore IMHO we definitely need ways to embed post-coordinated terms (for defining meaning) and ECL (for valuesets) in terminology bindings. Tom I like

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