___
galaxy-user mailing list
galaxy-user@lists.bx.psu.edu
http://lists.bx.psu.edu/listinfo/galaxy-user
--
Jennifer Jackson
http://usegalaxy.org
___
galaxy-user mailing list
galaxy-user@lists.bx.psu.edu
http://lists.bx.psu.edu/listinfo/galaxy-user
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
galaxy-user mailing list
galaxy-user@lists.bx.psu.edu
http://lists.bx.psu.edu/listinfo/galaxy-user
/6682d97aabcbfc0d3b720c1e020e8c644d
76e27d
-- Fin del mensaje reenviado
___
galaxy-user mailing list
galaxy-user@lists.bx.psu.edu
http://lists.bx.psu.edu/listinfo/galaxy-user
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
was suggested from galaxy's
site to go to
https://bitbucket.org/james_taylor/bx-python/wiki/Home
I downloaded and installed the bx-python package, but know I dont know
which script to run
I would appreciate any help
Thanks
Anna
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
.
___
galaxy-user mailing list
galaxy-user@lists.bx.psu.edu
http://lists.bx.psu.edu/listinfo/galaxy-user
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
galaxy-user mailing list
galaxy-user@lists.bx.psu.edu
http://lists.bx.psu.edu
subscriptions to this and other Galaxy lists, please use the
interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of Galaxy analysis and
other
To manage your subscriptions to this and other Galaxy lists, please use the
interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion
,fastqsanger
name=input type=data label=Library to clip /
Peter
___
galaxy-user mailing list
galaxy-user@lists.bx.psu.edu
http://lists.bx.psu.edu/listinfo/galaxy-user
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
Hi Nadege,
I am forwarding your question to galaxy-u...@bx.psu.edu which is the
best place to send data questions, so that the entire team can provide
input. We will get back to you as soon as possible.
Thanks!
Jen
Galaxy team
---
Hi Jen,
I am completely new to the field of ChIP-seq and
are all gone. Any idea what
happened?
Thank you.
Haiping
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion
of Galaxy analysis and other features on the public
server at usegalaxy.org
subscriptions to this and other
Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis
,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
instances and the Galaxy source code, please use the
Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other
Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http
in this regard will be
apprceiated.
Vasu
--- On *Mon, 1/3/11, Jennifer Jackson /j...@bx.psu.edu/* wrote:
From: Jennifer Jackson j...@bx.psu.edu
Subject: Re: [galaxy-user] Fwd: Need a generous help regarding uploading
To: vasu punj pu...@yahoo.com
Cc: galaxy-u...@bx.psu.edu galaxy-u
of California, Irvine
Irvine, CA 92697-1700
phone: 949-824-7341
e-mail: reste...@uci.edu
fax: 949-824-2688
web: http://polyp.biochem.uci.edu/wiki/index.php/Main_Page
On 3/7/11 1:12 PM, Jennifer Jackson wrote:
Hi Rob,
The project ABRM links to several thousand individual WGS
submissions
subscriptions to this and other
Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis
/galaxy-dev
To manage your subscriptions to this and other
Galaxy lists, please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used
://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies
and the Galaxy source code, please use the Galaxy
Development
list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the
interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
, please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used
Apologies Michael, wrong answer to the wrong question!
Please ignore and thanks for the heads up!
jen
On 3/18/11 10:22 AM, Jennifer Jackson wrote:
Hello Daniel,
Currently this is not possible through the Galaxy UI, but is is an
excellent functionality suggestion that our team has been
://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies
: biomart plugin (Greg Von Kuster)
3. Re: Convert SOLiD data (Ryan Golhar)
4. Re: Convert SOLiD data (Jennifer Jackson)
5. Re: Sort index SAM-files automatically (Ryan Golhar)
--
Message: 1
Date: Mon, 28 Mar 2011 11:35:15
, Evan Schwab wrote:
Hi Jen,
The aaChanges tool is still not supporting the zebrafish Zv9 build. Can
you please fix this so that I am able to use the aaChanges tool. It's
very important.
Thanks
Evan
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
, at 14:19, Jennifer Jackson wrote:
Hi David,
Right now we don't have anything built-in to filter out this type of
duplication automatically.
As a potential option, did you know that we offer a Canonical Female build
for certain genomes? This may help with some of the duplication issues
the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http
in
your history.
Thanks!
Jen
Galaxy team
On 4/18/11 11:04 AM, Jennifer Jackson wrote:
Hello Falak,
The tools in Text Manipulation, Filter and Sort, and Join, Subtract
and Group are designed to help with this type of file analysis (basic
stats). Please explore and let us know if you need help
of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
Hello -
Few more links that may be helpful:
http://bitbucket.org/galaxy/galaxy-central/wiki/DataTables
https://bitbucket.org/galaxy/galaxy-central/wiki/ToolDependencies
Thanks!
Jen
On 4/20/11 1:49 PM, Jennifer Jackson wrote:
Hello Giovanni,
Galaxy does not (yet) support genome downloads
code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list
/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list
to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other
to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other
at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep
the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org
team can contribute to replies. This would be especially helpful when
you have a new question.
On 5/16/11 11:53 AM, sukeerthi teja Rallapalli wrote:
Jen,
Thank you so much. In the NGS toolbox what option should i choose.
Regards
Teja
--
Jennifer Jackson
http://usegalaxy.org
http
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion
output. Failing that, is there an easy text manipulation that would convert that fasta header
space to a |?
Regards,
Curtis
-Original Message-
From: Jennifer Jackson [mailto:j...@bx.psu.edu]
Sent: Monday, May 16, 2011 6:50 PM
To: Robert Curtis Hendrickson
Cc: 'galaxy-user@lists.bx.psu.edu
/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should
://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all
Message-
From: Jennifer Jackson [mailto:j...@bx.psu.edu]
Sent: Wednesday, May 18, 2011 11:45 AM
To: Robert Curtis Hendrickson
Cc: galaxy-user
Subject: Re: [galaxy-user] UCSC-EMBOSS/fuzznuc-UCSC workflow?
Hello Curtis,
The BED extraction data can be resolved in Galaxy. Pull out the whole
gene
and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other
:
https://bitbucket.org/galaxy/galaxy-central/wiki/Home
Thanks for using Galaxy!
Jen
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other
and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
paths/files in AlignSec.loc?
This is for our local instance of Galaxy.
-John
From: galaxy-user-boun...@lists.bx.psu.edu
[galaxy-user-boun...@lists.bx.psu.edu] On Behalf Of Jennifer Jackson
[j...@bx.psu.edu]
Sent: Tuesday, June 21, 2011 10:23 AM
at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep
Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
Associate
Center for Clinical and Translational Science
University of Alabama at Birmingham
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other
[mailto:galaxy-user-
boun...@lists.bx.psu.edu] On Behalf Of Jennifer Jackson
Sent: Friday, June 10, 2011 3:58 PM
To: David Robinson
Cc: galaxy-user@lists.bx.psu.edu
Subject: Re: [galaxy-user] Error running cufflinks on Galaxy
Hello David,
Cufflinks requires locally cached data to perform the Bias
June 23, 2011 Galaxy Development News Brief
http://galaxyproject.org/wiki/Features/DevNewsBrief/2011_06_23
== Source Distribution ==
http://getgalaxy.org
new: % hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist
upgrade: % hg pull -u -r 720455407d1c
== GCC 2011 ==
We had ~
Dear all,
I tried to follow the Cufflinks tutorial created by Jeremy. The
problems start with first visualization step. The is no overlapping
at all between Cufflinks transcripts and RefSeq Chr19 reference,
provided on the tutorial page. Was that the goal, or transcripts
should overlap and
the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
Link correction:
http://getgalaxy.or/cloud
should be http://usegalaxy.org/cloud
With the two answers from our team to (hopefully) help, we wish the best
for your project,
Jen
Galaxy team
___
The Galaxy User list should be used for
update the yeast genome to match the following 2011 release?
Ensembl release 9 for Fungal database (which is dependant on SGD
database) [link :
http://fungi.ensembl.org/Saccharomyces_cerevisiae/Info/Index].
Thank you,
Edward
On Jun 27, 2011, at 11:58 AM, Jennifer Jackson wrote:
Hello Edward
lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public
source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used
Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http
to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other
/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used
tophat
alone.
The broken pipe error is likely due to a file that is not closed by a
previous step.
Have anyone tested tophat 1.3 on galaxy?
Thanks,
Song
On Tue 07/19/11 6:45 PM , Jennifer Jackson j...@bx.psu.edu wrote:
Hello Song Li,
The file extension seems to be a mismatch
of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using
:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org
/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org/
http://galaxyproject.org/
___
The Galaxy User list should be used
use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public
of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http
subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
Hi Dear
Is there anybody whom I can share my data with? I have an important
question that I tried to answer, but I could
item
to set the genome build. The problem is that used a custom index since
AaegL1 is not available locally. Any thoughts how to go around it. I
will attach a ss.
Thank you .
Luciano
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
___
The Galaxy User
Hi Ximena,
I have placed this request into a ticket for easier tracking:
https://bitbucket.org/galaxy/galaxy-central/issue/637
Thanks again for the suggestion,
Jen
Galaxy team
On 5/31/11 6:43 AM, Jennifer Jackson wrote:
Hello Ximena,
Thank you for bring this to our attention, we are able
/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list
the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep
On Sat, Jul 30, 2011 at 1:44 AM, Jennifer Jackson j...@bx.psu.edu
mailto:j...@bx.psu.edu wrote:
Hello Thomas,
For 454 data, there is a specific screencast that may be of
interest. Go to http://usegalaxy.org and scroll in the middle
pane to find quickie #15
of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list
://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
___
The Galaxy
does not seem to be
available as far as I can tell. Is there a way to unbuild an index into a
fasta file? Or would you reconsider adding this index?
Note, I am a very novice Galaxy user.
Thanks again
Howard
On Aug 19, 2011, at 5:29 PM, Jennifer Jackson wrote:
Hello Howard,
To use
=== Please use Reply All when responding to this email! ===
Hi Jen, is anyway I can directly load the analyzed data from galaxy to
IGV (Integrative genome viewer) without downloading data to my computer
first?
Thanks,
tao
___
The
); but the
other one is around 6-8 in most bases (R4) (see the attached PDF files).
Does this mean R4 RNA-seq data are BAD? What exactly does it mean anyway?
Thanks for your help,
tao
-Original Message-
From: Jennifer Jackson [mailto:j...@bx.psu.edu]
Sent: Thu 8/18/2011 3:46 PM
To: galaxy-u
it is local, so what should I do?
Cheers,
David
2011/8/26 Jennifer Jackson j...@bx.psu.edu mailto:j...@bx.psu.edu
=== Please use Reply All when responding to this email!===
Hello David,
You are correct, this tool will only function when a database is
defined with Galaxy already
August 30, 2011 Galaxy Development News Brief
http://galaxyproject.org/wiki/News%20Briefs/2011_08_30
Source: http://getgalaxy.org
new: % hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist
upgrade: % hg pull -u -r 949e4f5fa03a
What's New
ISMB/ECCB, BOSC, and 3DSIG 2011 Slides
1 - 100 of 951 matches
Mail list logo
