mauve-users

Messages by Date

2013/08/30 [Mauve-users] how to view the aligned sequence, please Manal Farid
2013/08/25 Re: [Mauve-users] Mauve strips U residues from RNA sequences Guy Plunkett III
2013/08/25 [Mauve-users] mauve gets into "infinite" loop Guy Plunkett III
2013/08/22 Re: [Mauve-users] order of the contig Aaron Darling
2013/08/22 Re: [Mauve-users] Mauve aligning genomes error code -1073741676 Aaron Darling
2013/08/21 [Mauve-users] Mauve aligning genomes error code -1073741676 Zhao Jin
2013/08/12 [Mauve-users] order of the contig Jingjing Jin
2013/08/03 Re: [Mauve-users] mauve terminal running error Aaron Darling
2013/08/02 [Mauve-users] mauve terminal running error Jingjing Jin
2013/07/26 [Mauve-users] Extract core alignment in fasta format from Mauve output Lu Cheng
2013/07/18 Re: [Mauve-users] Query about mauve error Meg Woolfit
2013/07/18 Re: [Mauve-users] Query about mauve error Aaron Darling
2013/07/17 Re: [Mauve-users] Mauve output Eduardo Castro Nallar
2013/07/16 Re: [Mauve-users] Mauve output Aaron Darling
2013/07/16 [Mauve-users] Mauve output Manal Farid
2013/07/16 Re: [Mauve-users] Query about mauve error Hiren Ghosh
2013/07/15 Re: [Mauve-users] Query about mauve error Aaron Darling
2013/07/15 Re: [Mauve-users] progressiveMauve LCBs Aaron Darling
2013/07/15 Re: [Mauve-users] (no subject) Bigelow, Simone
2013/07/15 Re: [Mauve-users] (no subject) Aaron Darling
2013/07/14 Re: [Mauve-users] (no subject) Bats
2013/07/14 Re: [Mauve-users] (no subject) Shlomo Blum
2013/07/13 Re: [Mauve-users] (no subject) Shlomo Blum
2013/07/12 Re: [Mauve-users] (no subject) Shlomo Blum
2013/07/12 [Mauve-users] (no subject) Bigelow, Simone
2013/07/10 [Mauve-users] progressiveMauve LCBs dpanis
2013/07/09 [Mauve-users] Query about mauve error Hiren Ghosh
2013/05/27 [Mauve-users] Error during contig reordering Shlomo Blum
2013/05/07 [Mauve-users] Strain specific regions Shlomo Blum
2013/01/25 [Mauve-users] Parallel Mauve Shyam Saladi
2013/01/23 [Mauve-users] annotations lost in contig mover Lee Katz
2013/01/20 [Mauve-users] inconsistent error in progressiveMauve Bas E. Dutilh
2013/01/16 [Mauve-users] OutOfMemoryError, "Thread-7": Java heap space using Mauve Contig Mover Lucinda Lawson
2013/01/15 [Mauve-users] Export SNPs from the command line Tracy Doyle
2013/01/06 [Mauve-users] "oh skeethockey mushrooms" fix Bob Cohen
2012/12/23 Re: [Mauve-users] Errors in Constructing seed occurrence lists for repeat detection Bas E. Dutilh
2012/12/20 Re: [Mauve-users] Errors in Constructing seed occurrence lists for repeat detection Bas E. Dutilh
2012/12/19 [Mauve-users] Errors in Constructing seed occurrence lists for repeat detection Bas E. Dutilh
2012/12/05 [Mauve-users] stripGapColumns Camilla Nesbo
2012/11/30 [Mauve-users] Slow Visualization. Any tips? peter.r.h...@okstate.edu
2012/11/29 Re: [Mauve-users] memory peter.r.h...@okstate.edu
2012/11/29 [Mauve-users] memory Kirstin Hanks
2012/11/24 [Mauve-users] problem exporting orthologs Alina Grigorescu
2012/11/24 [Mauve-users] can Mauve provide the % similarity between aligned genomes? Alina Grigorescu
2012/11/14 [Mauve-users] std::ios_base::failure Animesh Sharma
2012/11/09 [Mauve-users] copy sequence from Mauve alignment Alina Grigorescu
2012/10/11 [Mauve-users] bbcols (was: bug in stripSubsetLCBs?) Adam Retchless
2012/10/09 [Mauve-users] bug in stripSubsetLCBs? Adam Retchless
2012/10/07 [Mauve-users] aligning sequences in MAUVE maha ahmed
2012/09/21 Re: [Mauve-users] Can features from a reference genome be transferred to a draft genome? peter.r.h...@okstate.edu
2012/09/20 [Mauve-users] Can features from a reference genome be transferred to a draft genome? peter.r.h...@okstate.edu
2012/09/11 Re: [Mauve-users] How to map back mauve alignment to original individual Sequences Anna Rissman
2012/09/11 [Mauve-users] How to map back mauve alignment to original individual Sequences Münsterkötter, Martin, Dr.
2012/09/07 Re: [Mauve-users] problem with input files in mauve Guy Plunkett III
2012/09/07 Re: [Mauve-users] problem with input files in mauve Alina Grigorescu
2012/09/06 Re: [Mauve-users] problem with input files in mauve Guy Plunkett III
2012/09/05 [Mauve-users] problem with input files in mauve Alina Grigorescu
2012/08/03 Re: [Mauve-users] Mauve for HPC/Cloud Theodore Omtzigt
2012/08/02 [Mauve-users] Mauve for HPC/Cloud Stamps, Blake W.
2012/07/05 [Mauve-users] unique genes Bruijn, Irene de
2012/06/07 [Mauve-users] percent identity between genomes Joseph Fass
2012/06/01 [Mauve-users] CDS not recognised as orthologues (Export: Ortholog) Johanna Klughammer
2012/05/29 [Mauve-users] sequence "screenshot" tool? Joseph Fass
2012/05/02 [Mauve-users] aligning multiple Eukaryotic genome Pankaj Barah
2012/04/03 [Mauve-users] seg fault in projectAndStrip Josh Earl
2012/03/31 [Mauve-users] Question on MCM output files Donthu, Ravikiran
2012/03/08 [Mauve-users] Error Code: 3 Anna Tai
2012/01/12 [Mauve-users] LCB boundary file? mlcourrier-...@yahoo.fr
2012/01/05 [Mauve-users] Error with multi-fasta file inputs Bin Ye
2011/12/22 [Mauve-users] Identify contig borders Thomas Weinmaier
2011/12/15 Re: [Mauve-users] X11 problem when running cmd line contig reordering Anna Rissman
2011/12/13 Re: [Mauve-users] X11 problem when running cmd line contig reordering Roy Weckiewicz
2011/12/13 Re: [Mauve-users] X11 problem when running cmd line contig reordering Anna Rissman
2011/12/06 Re: [Mauve-users] X11 problem when running cmd line contig reordering Nick Loman
2011/12/06 Re: [Mauve-users] X11 problem when running cmd line contig reordering Steven Platt
2011/12/02 [Mauve-users] assembly scoring script issue Roy Weckiewicz
2011/12/02 Re: [Mauve-users] X11 problem when running cmd line contig reordering Alex Copeland
2011/12/02 [Mauve-users] X11 problem when running cmd line contig reordering Steven Platt
2011/11/30 [Mauve-users] mauve comand line problem Tomiczek, Bartlomiej
2011/11/29 Re: [Mauve-users] order of sequences Joseph Fass
2011/11/04 [Mauve-users] order of sequences Kirstin Hanks
2011/10/17 Re: [Mauve-users] Getting snps or orthologs from the command line Kirstin Hanks
2011/09/16 [Mauve-users] feature coordinate comparison Münsterkötter, Martin, Dr.
2011/08/30 [Mauve-users] java.lang.ArrayIndexOutOfBoundsException error Surya Saha
2011/08/26 [Mauve-users] Uploading Data to Mauve Using Java Web Start (JNLP) Al Ramsey
2011/08/24 [Mauve-users] Coordinate system Omar Eduardo Cornejo Ordaz
2011/08/11 [Mauve-users] coordinate issues Satbir Gill
2011/08/02 [Mauve-users] problems with stripSubsetLCBs Mcnally, Alan
2011/07/13 [Mauve-users] Constructing seed occurrence lists for repeat detection bug? Yang Li
2011/06/30 [Mauve-users] Problem with Mauve Pedamallu Chandra Sekhar
2011/06/29 [Mauve-users] Export jpeg or other picture format via command-line? Roy Weckiewicz
2011/06/02 Re: [Mauve-users] Parallel mauve Kathryn Holt
2011/05/23 Re: [Mauve-users] Mauve error code 11 Guy Plunkett III
2011/05/13 [Mauve-users] Parallel mauve Nick Loman
2011/04/12 [Mauve-users] error 134 Kirstin Hanks
2011/04/07 [Mauve-users] cinema-MX sepideh
2011/03/11 [Mauve-users] Problem with aligned/unaligned coordinates [.backbone to .xmfa] Maren Friesen
2011/03/07 [Mauve-users] SNP file from command line Gandhi, Khanjan
2011/03/03 [Mauve-users] Error code: -2147483645 Guy Plunkett III
2011/02/28 [Mauve-users] Out of Bounds error Gandhi, Khanjan
2011/02/19 [Mauve-users] Mauve Contig Mover "Thread-26" java.lang.error.Error: Inconsistency error Glorimar Marrero
2011/02/10 [Mauve-users] Genome annotations using clonal origin? Sang Chul Choi
2011/02/01 [Mauve-users] mauve error code 3 denghuiguo
2011/01/27 Re: [Mauve-users] Using mauve to align scaffolds Nick Loman
2011/01/27 Re: [Mauve-users] Using mauve to align scaffolds Joseph Fass
2011/01/26 [Mauve-users] Using mauve to align scaffolds Nick Loman
2011/01/25 [Mauve-users] identity matrix -or- genome content distance matrix Matthew Bendall
2011/01/13 Re: [Mauve-users] SNP file from command line Lee Katz
2010/12/22 Re: [Mauve-users] contig mover_error message-unknown source ANNA INDIGO RISSMAN
2010/12/22 [Mauve-users] Mugsy vs Mauve Nick Loman
2010/12/16 Re: [Mauve-users] Choosing reference genomes for contig mover ANNA INDIGO RISSMAN
2010/12/16 Re: [Mauve-users] Running mauve in headless mode Sang Chul Choi
2010/12/16 Re: [Mauve-users] Running mauve in headless mode ANNA INDIGO RISSMAN
2010/12/16 [Mauve-users] Running mauve in headless mode Nick Loman
2010/12/13 [Mauve-users] Choosing reference genomes for contig mover John Larsson
2010/12/09 [Mauve-users] Running time of about 50 bacterial genomes, each of which is about 2 Mbp? Sang Chul Choi
2010/12/08 Re: [Mauve-users] The LCB boundary file Sonja Voget
2010/12/08 [Mauve-users] 55 genomes alignment try - Bad file descriptor error? Sang Chul Choi
2010/12/02 [Mauve-users] Drag and drop behavior Lex Nederbragt
2010/11/30 Re: [Mauve-users] File format of incomplete genomes Aaron Darling
2010/11/30 Re: [Mauve-users] Alignment coverage threshold for ortholog export Aaron Darling
2010/11/29 [Mauve-users] File format of incomplete genomes Malene Bek-Thomsen
2010/11/24 [Mauve-users] Alignment coverage threshold for ortholog export Snitkin, Evan (NIH/NHGRI) [F]
2010/10/22 Re: [Mauve-users] Fwd: Re: (no subject) Aaron Darling
2010/10/20 Re: [Mauve-users] Aligning Exomes Aaron Darling
2010/10/20 [Mauve-users] Fwd: Re: (no subject) Sean Li
2010/10/19 [Mauve-users] Aligning Exomes Rosenfeld, Jeffrey
2010/10/15 Re: [Mauve-users] (no subject) Aaron Darling
2010/10/13 [Mauve-users] (no subject) Aguas, Ricardo J A
2010/10/05 Re: [Mauve-users] Mauve alignment viewer OutOfMemoryError Guy Plunkett III
2010/10/05 Re: [Mauve-users] Mauve alignment viewer OutOfMemoryError Aaron Darling
2010/10/04 [Mauve-users] Mauve alignment viewer OutOfMemoryError Guy Plunkett III
2010/09/28 [Mauve-users] Mauve - reordered annotations Münsterkötter, Martin, Dr.
2010/09/27 Re: [Mauve-users] Exporting orthologs Claudio Donati
2010/09/23 Re: [Mauve-users] Exporting orthologs Aaron Darling
2010/09/23 Re: [Mauve-users] java errors during Contig Mover run ANNA INDIGO RISSMAN
2010/09/23 Re: [Mauve-users] java errors during Contig Mover run Sullivan, Steven
2010/09/23 [Mauve-users] Exporting orthologs Claudio Donati
2010/09/22 Re: [Mauve-users] (no subject) Aaron Darling
2010/09/22 [Mauve-users] (no subject) Sullivan, Steven
2010/09/07 Re: [Mauve-users] interpreting back bone file Aaron Darling
2010/09/06 [Mauve-users] interpreting back bone file Kirstin Hanks
2010/08/19 Re: [Mauve-users] fasta formt expectations Guy Plunkett III
2010/08/19 Re: [Mauve-users] fasta formt expectations Aaron Darling
2010/08/19 [Mauve-users] fasta formt expectations Guy Plunkett III
2010/08/16 Re: [Mauve-users] Annotation and sequences extraction Aaron Darling
2010/08/12 [Mauve-users] Annotation and sequences extraction Mathieu Parent
2010/07/26 Re: [Mauve-users] DNASTAR sequences aligned but cannot display Aaron Darling
2010/07/26 [Mauve-users] DNASTAR sequences aligned but cannot display Guy Plunkett III
2010/07/23 Re: [Mauve-users] xmfa Aaron Darling
2010/07/19 [Mauve-users] xmfa jason sahl
2010/07/02 Re: [Mauve-users] Genbank alternatives ? Guy Plunkett III
2010/07/02 Re: [Mauve-users] Genbank alternatives ? Anastasia Gioti
2010/06/30 Re: [Mauve-users] Genbank alternatives ? Aaron Darling
2010/06/21 [Mauve-users] Genbank alternatives ? Anastasia Gioti
2010/05/08 Re: [Mauve-users] 64 bit Mauve contig mover? Aaron Darling
2010/05/04 Re: [Mauve-users] Genbank loading unsuccessful in graphical interface-error code 134 Anastasia Gioti
2010/05/03 Re: [Mauve-users] Genbank loading unsuccessful in graphical interface-error code 134 Aaron Darling
2010/05/03 [Mauve-users] Genbank loading unsuccessful in graphical interface-error code 134 Anastasia Gioti
2010/04/28 Re: [Mauve-users] The LCB boundary file Aaron Darling
2010/04/27 [Mauve-users] The LCB boundary file Ariadna Rodriguez Chamorro
2010/04/25 Re: [Mauve-users] mauve progressive error in linux Aaron Darling
2010/04/25 [Mauve-users] mauve progressive error in linux Joel McManus
2010/04/21 Re: [Mauve-users] Getting snps or orthologs from the command line Aaron Darling
2010/04/21 [Mauve-users] Getting snps or orthologs from the command line Snitkin, Evan (NIH/NHGRI) [F]
2010/04/13 Re: [Mauve-users] Mauve-users Digest, Vol 13, Issue 1 tomas duffy
2010/04/05 Re: [Mauve-users] Export Orthologs question Aaron Darling
2010/04/05 [Mauve-users] Export Orthologs question tomas duffy
2010/02/10 Re: [Mauve-users] Memory allocation error in MauveAligner Nicolas Tourasse
2010/01/31 Re: [Mauve-users] Memory allocation error in MauveAligner Aaron Darling
2010/01/31 [Mauve-users] Memory allocation error in MauveAligner Nicolas Tourasse
2009/12/22 Re: [Mauve-users] Building mauve Aaron Darling
2009/12/22 [Mauve-users] Building mauve Daniel Silvestre
2009/12/17 Re: [Mauve-users] Gap Penalties Aaron Darling
2009/12/17 [Mauve-users] Gap Penalties Ryan Tewhey
2009/10/30 Re: [Mauve-users] HOXD question Aaron Darling
2009/10/29 Re: [Mauve-users] Genbank Annotation not shown in Alignment Jason Flowers
2009/10/29 [Mauve-users] Genbank Annotation not shown in Alignment Jason Flowers
2009/10/29 Re: [Mauve-users] HOXD question Pat Burke
2009/10/28 Re: [Mauve-users] HOXD question Guy Plunkett III
2009/10/28 [Mauve-users] HOXD question Sean Conlan
2009/10/26 Re: [Mauve-users] mauve users Aaron Darling
2009/10/26 Re: [Mauve-users] mauve on OS X 10.6 Hinsby Cadillo
2009/10/26 Re: [Mauve-users] mauve users Debarati Paul
2009/10/26 [Mauve-users] mauve users Dag Anders Brede
2009/10/23 Re: [Mauve-users] mauve on OS X 10.6 Aaron Darling
2009/10/23 [Mauve-users] mauve on OS X 10.6 Hinsby Cadillo
2009/10/22 Re: [Mauve-users] mauve on OS X 10.6 Aaron Darling
2009/10/22 [Mauve-users] mauve on OS X 10.6 Douglas Ridgway
2009/10/06 Re: [Mauve-users] export orthologs error Aaron Darling
2009/10/06 [Mauve-users] export orthologs error Sarah Munro
2009/09/24 Re: [Mauve-users] Command line contig mover Aaron Darling
2009/09/24 [Mauve-users] Command line contig mover Snitkin, Evan (NIH/NHGRI) [F]
2009/08/12 Re: [Mauve-users] Problem with Mauve Contigs Mover Aaron Darling
2009/08/11 [Mauve-users] Problem with Mauve Contigs Mover Hao-Ping Chen
2009/08/11 Re: [Mauve-users] Mauve 2.3.0 on PowerPC Mac problem Aaron Darling
2009/08/10 Re: [Mauve-users] Mauve 2.3.0 on PowerPC Mac problem Guy Plunkett III
2009/08/09 Re: [Mauve-users] Mauve 2.3.0 on PowerPC Mac problem Juan Carlos Garcia
2009/08/07 Re: [Mauve-users] Mauve 2.3.0 on PowerPC Mac problem Guy Plunkett III
2009/08/07 [Mauve-users] Mauve 2.3.0 on PowerPC Mac problem Guy Plunkett III