Messages by Thread
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[Samtools-help] Picard Release 1.126
George Grant
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[Samtools-help] Merge Multiple BAM Files
yifeng
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[Samtools-help] 回复:Re: problem
aqwxq063201
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[Samtools-help] samtools mpileup conflict between 0 and 1 versions
Robert King (RRes-Roth)
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[Samtools-help] problem
王学强
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[Samtools-help] Picard Samtofastq stalls
Stuti Agrawal
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[Samtools-help] sort command
john@home
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[Samtools-help] question about sort
john@home
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[Samtools-help] Picard/CleanSam.jar dubts
antonio agraz
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[Samtools-help] BQ0 in perfect read-pair overlap
Andreas Wilm
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[Samtools-help] IlluminaBasecallsToSam Header error
Nacho Caballero
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[Samtools-help] version of gatk bundle for GRCh38?
Alexey Larionov
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[Samtools-help] Picard Release 1.125
George Grant
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Re: [Samtools-help] samtools depth question: minQLen
Peter Cock
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Re: [Samtools-help] Number of variants in vcf.gz file
Heng Li
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[Samtools-help] samtools-1.1: rmdup error
mehar
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[Samtools-help] Picard MarkDuplicates: mark or remove?
Katharine Walter
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[Samtools-help] VCF and edit operations
Karel Břinda
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[Samtools-help] [SPAM] You still haven't accepted tangwei1...@gmail.com's friend request. Accept?
tangwei1129
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[Samtools-help] Samtools/bcftools somatic calls
Ogan
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[Samtools-help] tangwei1...@gmail.com has indicated you're a friend. Accept?
tangwei1129
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[Samtools-help] samtools mpileup -- error status 141
Karel Břinda
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[Samtools-help] htsjdk error
阴长发
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[Samtools-help] IlluminaBasecallsToFastq on Nextseq run
Langhorst, Brad
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Re: [Samtools-help] samtools sort
Ann Mongan
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[Samtools-help] Samtools difference between -F 4 and -F 4 -q 1
Li, Xiu-Qing
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[Samtools-help] Homozygosity
Arumilli, Meharji
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[Samtools-help] merge bam files with identical @RG IDs
Tommy Carstensen
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[Samtools-help] Using SAMTools with de novo assembled contigs
Trish Klein
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[Samtools-help] MergeBamAlignment issue w/ trailing /1?
Ben Bimber
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[Samtools-help] Error Installing Samtools
Shana Burrowes
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[Samtools-help] Minimal filter
Holly Beale
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[Samtools-help] Out of memory behaviour when running samtools sort
C.Y. Lim
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[Samtools-help] Tag lost during samtools sort
Mark Ravinet
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[Samtools-help] Indel with insertion of "N"
Arumilli, Meharji
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[Samtools-help] Picard Release 1.124 - NOTE - Change to CLP Invocation!
George Grant
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[Samtools-help] Testing for absence of tag from info field with bcftools
Tim Hughes
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[Samtools-help] Strange INDELs
Rasmus Borup Hansen
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[Samtools-help] Samtools segfault in skip_aux() - long CIGAR string?
Nick Loman
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[Samtools-help] Positions missing in mpileup output
jbr950
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[Samtools-help] bcftools query missing a field
jbr950
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[Samtools-help] difference between bwa aln and mem
Daofeng Li
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[Samtools-help] can mpileup still output MQ values into a VCF
the all-new magic tortoise z
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[Samtools-help] picard CollectRnaSeqMetrics error: java.lang.NullPointerException
Tom Harrop
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[Samtools-help] N in ALT column
mehar
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[Samtools-help] samtools -s issues
Dror Hibsh
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[Samtools-help] Help
黄桦
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[Samtools-help] bam file error
Camille A. Daniels
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[Samtools-help] samtools mpileup call snp
ggu
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[Samtools-help] error samtools view -h
Alexis Bertrand
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[Samtools-help] samtools index segfault
Andrew Bjonnes
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[Samtools-help] SamLocusIterator
Julian Hess
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[Samtools-help] Issue with samtools sorting by name
Nenad Bartonicek
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[Samtools-help] MD tag with gaps in reference?
Florian Aldehoff
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[Samtools-help] Combined insertion/deletion missed completely
Marc Sturm
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[Samtools-help] Picard Release 1.123
George Grant
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[Samtools-help] quick question about read names in Picard MarkDuplicates
Richard Corbett
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[Samtools-help] ExtractIlluminaBarcodes on old HiSeq runs
Ducar, Matthew D.
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[Samtools-help] samtools sort crashing, truncating outputs
Amy Williams
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[Samtools-help] BCFtools caller - consensus vs multiallelic?
Casper Shyr
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[Samtools-help] samtools reheader causes terminal to flicker
Joshua Theisen
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[Samtools-help] strand bias threshold value
Arumilli, Meharji
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[Samtools-help] MarkDuplicates output
Ryan G
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[Samtools-help] Meaning of BAQ 0 in given context
Andreas Wilm
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[Samtools-help] Samtools vs GATK functionality
Lau, Branden M - (bmlau)
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[Samtools-help] [bcf_sync] incorrect number of fields
Casper Shyr
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[Samtools-help] Tracking changes in versions
Sukhadia, Shrey S
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[Samtools-help] Reporting Bug - Optical Duplicates of Picard MarkDuplicates
Salzberg, Anna
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[Samtools-help] read qual distr
William Gilks