aroma-affymetrix
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Re: [aroma.affymetrix] 500K by doCRMAv2
Wei Tang
Re: [aroma.affymetrix] 500K by doCRMAv2
Wei Tang
Re: [aroma.affymetrix] 500K by doCRMAv2
Henrik Bengtsson
Re: [aroma.affymetrix] 500K by doCRMAv2
Wei Tang
Re: [aroma.affymetrix] 500K by doCRMAv2
Wei Tang
Re: [aroma.affymetrix] 500K by doCRMAv2
Henrik Bengtsson
Re: [aroma.affymetrix] 500K by doCRMAv2
Henrik Bengtsson
[aroma.affymetrix] Error in cbs segmentation crmav2
ysapkota
Re: [aroma.affymetrix] Error in cbs segmentation crmav2
Henrik Bengtsson
Re: [aroma.affymetrix] Error in cbs segmentation crmav2
ysapkota
[aroma.affymetrix] aroma.affymetrix v2.9.0 released
Henrik Bengtsson
[aroma.affymetrix]
nawin MOHAMMED
[aroma.affymetrix] need help please
nawin MOHAMMED
[aroma.affymetrix] Setting up annotation data in aroma.affymetrix
Pierre Neuvial
[aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
[aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
Pierre Neuvial
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
Henrik Bengtsson
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
Pierre Neuvial
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
nawin MOHAMMED
Re: [aroma.affymetrix] Re: Setting up annotation data in aroma.affymetrix
Henrik Bengtsson
[aroma.affymetrix] SNP_6 raw intensity Extraction
jonathan . crowther2
Re: [aroma.affymetrix] SNP_6 raw intensity Extraction
Henrik Bengtsson
Re: [aroma.affymetrix] SNP_6 raw intensity Extraction
jonathan . crowther2
Re: [aroma.affymetrix] SNP_6 raw intensity Extraction
Henrik Bengtsson
Re: [aroma.affymetrix] SNP_6 raw intensity Extraction
jonathan . crowther2
Re: [aroma.affymetrix] SNP_6 raw intensity Extraction
nawin MOHAMMED
[aroma.affymetrix] nsfilter error from expressionset
andreia . fonseca
Re: [aroma.affymetrix] nsfilter error from expressionset
Henrik Bengtsson
[aroma.affymetrix] Error: could not find function "process"
Uma Shankavaram
Re: [aroma.affymetrix] Error: could not find function "process"
Henrik Bengtsson
Re: [aroma.affymetrix] Error: could not find function "process"
Henrik Bengtsson
Re: [aroma.affymetrix] Error: could not find function "process"
Uma Shankavaram
Re: [aroma.affymetrix] Error: could not find function "process"
Henrik Bengtsson
Re: [aroma.affymetrix] Error: could not find function "process"
Uma Shankavaram
Re: [aroma.affymetrix] Error: could not find function "process"
Henrik Bengtsson
Re: [aroma.affymetrix] Error: could not find function "process"
Uma Shankavaram
Re: [aroma.affymetrix] Error: could not find function "process"
Uma Shankavaram
Re: [aroma.affymetrix] Error: could not find function "process"
Henrik Bengtsson
Re: [aroma.affymetrix] callAB gives Error in bootstrapTCNandDHByRegion.PairedPSCBS
Henrik Bengtsson
Re: [aroma.affymetrix] callAB gives Error in bootstrapTCNandDHByRegion.PairedPSCBS
Ingrid Lönnstedt
Re: [aroma.affymetrix] callAB gives Error in bootstrapTCNandDHByRegion.PairedPSCBS
Henrik Bengtsson
Re: [aroma.affymetrix] callAB gives Error in bootstrapTCNandDHByRegion.PairedPSCBS
Henrik Bengtsson
Re: [aroma.affymetrix] callAB gives Error in bootstrapTCNandDHByRegion.PairedPSCBS
Henrik Bengtsson
[aroma.affymetrix] genotyping crlmm genomewidesnp 6.0
Carles Hernández
[aroma.affymetrix] Re: genotyping crlmm genomewidesnp 6.0
Carles Hernández
Re: [aroma.affymetrix] genotyping crlmm genomewidesnp 6.0
Henrik Bengtsson
Re: [aroma.affymetrix] genotyping crlmm genomewidesnp 6.0
Carles Hernández
Re: [aroma.affymetrix] genotyping crlmm genomewidesnp 6.0
Henrik Bengtsson
Re: [aroma.affymetrix] genotyping crlmm genomewidesnp 6.0
Carles Hernández
[aroma.affymetrix] Affy methylation tiling arrays - comparison of multiple groups
Andrew Beggs
[aroma.affymetrix] Re: Affy methylation tiling arrays - comparison of multiple groups
Andrew Beggs
RE: [aroma.affymetrix] Affy methylation tiling arrays - comparison of multiple groups
Dario Strbenac
Re: [aroma.affymetrix] PSCBS and callNTCN()
Oscar Rueda
Re: [aroma.affymetrix] PSCBS and callNTCN()
Henrik Bengtsson
Re: [aroma.affymetrix] PSCBS and callNTCN()
Oscar Rueda
Re: PSCBS and callNTCN() (Was: Re: [aroma.affymetrix] Digest for aroma-affymetrix@googlegroups.com - 2 Messages in 1 Topic)
Henrik Bengtsson
[aroma.affymetrix] AromaUnitTotalCnBinarySet$byName- Error in cdf[[1]] : subscript out of bounds
ahkee1978
Re: [aroma.affymetrix] AromaUnitTotalCnBinarySet$byName- Error in cdf[[1]] : subscript out of bounds
Henrik Bengtsson
[aroma.affymetrix] Exporting intensity values from SNP chip
ahkee1978
Re: [aroma.affymetrix] Exporting intensity values from SNP chip
Henrik Bengtsson
[aroma.affymetrix] Gene estimation on core probes and subsequent FIRMA score calculation for full probes
rene.rotterdam
[aroma.affymetrix] Error in callAB (PSCBS)
Oscar Rueda
Re: [aroma.affymetrix] Error in callAB (PSCBS)
Henrik Bengtsson
Re: [aroma.affymetrix] Error in callAB (PSCBS)
Henrik Bengtsson
Re: [aroma.affymetrix] Error in callAB (PSCBS)
Oscar Rueda
Re: [aroma.affymetrix] Error in callAB (PSCBS)
Henrik Bengtsson
[aroma.affymetrix] binary CDF files on-line
Hooiveld, Guido
[aroma.affymetrix] Affymetrix Gene 2.0 ST-array cdf files for Human, Mouse and rat.
rangerq
RE: [aroma.affymetrix] Affymetrix Gene 2.0 ST-array cdf files for Human, Mouse and rat.
Hooiveld, Guido
[aroma.affymetrix] Error performing MAT normalization
iblhac
[aroma.affymetrix] calmate error (doASCRMAv2)
Zheng Siyuan
Re: [aroma.affymetrix] calmate error (doASCRMAv2)
Henrik Bengtsson
Re: [aroma.affymetrix] calmate error (doASCRMAv2)
Zheng Siyuan
Re: [aroma.affymetrix] calmate error (doASCRMAv2)
Zheng Siyuan
Re: [aroma.affymetrix] calmate error (doASCRMAv2)
Henrik Bengtsson
Re: [aroma.affymetrix] calmate error (doASCRMAv2)
Siyuan Zheng
Re: [aroma.affymetrix] calmate error (doASCRMAv2)
Henrik Bengtsson
Re: [aroma.affymetrix] calmate error (doASCRMAv2)
Siyuan Zheng
[aroma.affymetrix] Errors when processed Vignette:CRMAv2
Foxchase
Re: [aroma.affymetrix] Errors when processed Vignette:CRMAv2
Pierre Neuvial
Re: [aroma.affymetrix] Errors when processed Vignette:CRMAv2
Foxchase
[aroma.affymetrix] unexpected result form Paired total copy-number analysis
Saman Amini
Re: [aroma.affymetrix] unexpected result form Paired total copy-number analysis
Henrik Bengtsson
Re: [aroma.affymetrix] unexpected result form Paired total copy-number analysis
Saman Amini
[aroma.affymetrix] aroma.affymetrix v2.8.0 released
Henrik Bengtsson
[aroma.affymetrix] which version cdf should used when apply FIRMAGene
zhouzaiwei
Re: [aroma.affymetrix] which version cdf should used when apply FIRMAGene
Mark Robinson
[aroma.affymetrix] Error in if (hasTimestamp) { : argument is of length zero
Hooiveld, Guido
Re: [aroma.affymetrix] Error in if (hasTimestamp) { : argument is of length zero
Henrik Bengtsson
[aroma.affymetrix] error on FIRMAGene
zhouzaiwei
Re: [aroma.affymetrix] error on FIRMAGene
Henrik Bengtsson
Re:Re: [aroma.affymetrix] error on FIRMAGene
周在威
Re: [aroma.affymetrix] error on FIRMAGene
zhouzaiwei
[aroma.affymetrix] Gene 2.0 ST arrays
Maria Traka
Re: [aroma.affymetrix] Gene 2.0 ST arrays
Henrik Bengtsson
RE: [aroma.affymetrix] Gene 2.0 ST arrays
Hooiveld, Guido
Re: [aroma.affymetrix] Gene 2.0 ST arrays
Henrik Bengtsson
RE: [aroma.affymetrix] Gene 2.0 ST arrays
Hooiveld, Guido
Re: [aroma.affymetrix] Gene 2.0 ST arrays
Henrik Bengtsson
Re: [aroma.affymetrix] Gene 2.0 ST arrays
Maria Traka
[aroma.affymetrix] Re: Gene 2.0 ST arrays
Neetu Tandon
RE: [aroma.affymetrix] Re: Gene 2.0 ST arrays
Hooiveld, Guido
Re: [aroma.affymetrix] Re: Gene 2.0 ST arrays
Neetu Tandon
RE: [aroma.affymetrix] Re: Gene 2.0 ST arrays
Hooiveld, Guido
Re: [aroma.affymetrix] Re: Gene 2.0 ST arrays
Neetu Tandon
Re: [aroma.affymetrix] How to update the annotation names of a custom CDF? (Was: Trouble Getting Mouse annotations after FIRMA run.)
Henrik Bengtsson
Re: [aroma.affymetrix] How to do multiple FIRMA analyzes with different CDFs? (Was: Trouble Getting Mouse annotations after FIRMA run)
Henrik Bengtsson
Re: [aroma.affymetrix] How to get probe sequences for MoEx-1_0-st-v1? (Was: Trouble Getting Mouse annotations after FIRMA run)
Henrik Bengtsson
[aroma.affymetrix] Trouble Getting Mouse annotations after FIRMA run.
Sam Danziger
[aroma.affymetrix] Re: Trouble Getting Mouse annotations after FIRMA run.
Rishi Das Roy
[aroma.affymetrix] aroma.affymetrix v2.7.0 released
Henrik Bengtsson
[aroma.affymetrix] Error: cannot allocate vector of size 618.0 Mb
zhouzaiwei
Re: [aroma.affymetrix] Error: cannot allocate vector of size 618.0 Mb
Henrik Bengtsson
Re:Re: [aroma.affymetrix] Error: cannot allocate vector of size 618.0 Mb
zhouzaiwei
Re: Re: [aroma.affymetrix] Error: cannot allocate vector of size 618.0 Mb
Henrik Bengtsson
Re:Re: Re: [aroma.affymetrix] Error: cannot allocate vector of size 618.0 Mb
zhouzaiwei
Re: Re: Re: [aroma.affymetrix] Error: cannot allocate vector of size 618.0 Mb
Henrik Bengtsson
[aroma.affymetrix] problem running CRMAv2
Ioana Cutcutache
[aroma.affymetrix] problem using CRMA v2
Ioana Cutcutache
Re: [aroma.affymetrix] problem using CRMA v2
Henrik Bengtsson
Re: [aroma.affymetrix] problem using CRMA v2
Ioana Cutcutache
Re: [aroma.affymetrix] problem using CRMA v2
Henrik Bengtsson
Re: [aroma.affymetrix] problem using CRMA v2
Ioana Cutcutache
Re: [aroma.affymetrix] problem using CRMA v2
Henrik Bengtsson
Re: [aroma.affymetrix] problem using CRMA v2
Ioana Cutcutache
Re: [aroma.affymetrix] problem using CRMA v2
Henrik Bengtsson
Re: [aroma.affymetrix] problem using CRMA v2
Ioana Cutcutache
Re: [aroma.affymetrix] problem using CRMA v2
Henrik Bengtsson
Re: [aroma.affymetrix] problem using CRMA v2
Ioana Cutcutache
Re: [aroma.affymetrix] problem using CRMA v2
Henrik Bengtsson
[aroma.affymetrix] SNP6.0 annotation
Svetlana Vinogradova
Re: [aroma.affymetrix] SNP6.0 annotation
Henrik Bengtsson
[aroma.affymetrix] Failed to identify CDF unit with unit name
Raj Patrao
Re: [aroma.affymetrix] Failed to identify CDF unit with unit name
Henrik Bengtsson
[aroma.affymetrix] Re: Failed to identify CDF unit with unit name
Raj Patrao
Re: [aroma.affymetrix] Re: Failed to identify CDF unit with unit name
Henrik Bengtsson
Re: [aroma.affymetrix] Re: Failed to identify CDF unit with unit name
Raj Patrao
Re: [aroma.affymetrix] Re: Failed to identify CDF unit with unit name
Henrik Bengtsson
[aroma.affymetrix] Re: Failed to identify CDF unit with unit name
Raj Patrao
Re: [aroma.affymetrix] Re: Failed to identify CDF unit with unit name
Henrik Bengtsson
[aroma.affymetrix] Re: Failed to identify CDF unit with unit name
Raj Patrao
Re: [aroma.affymetrix] Re: Failed to identify CDF unit with unit name
Henrik Bengtsson
[aroma.affymetrix] R.utils dependency issue
Weng Khong Lim
Re: [aroma.affymetrix] R.utils dependency issue
Henrik Bengtsson
Re: [aroma.affymetrix] R.utils dependency issue
Henrik Bengtsson
Re: [aroma.affymetrix] R.utils dependency issue
Weng Khong Lim
[aroma.affymetrix] ArrayExplorer 3.4.0 problems with IE9
Laurent Malvert
Re: [aroma.affymetrix] ArrayExplorer 3.4.0 problems with IE9
Henrik Bengtsson
RE: [aroma.affymetrix] ArrayExplorer 3.4.0 problems with IE9
Laurent Malvert
Re: [aroma.affymetrix] ArrayExplorer 3.4.0 problems with IE9
Henrik Bengtsson
[aroma.affymetrix] RmaPlm Error in .subset2(groups, 1) : subscript out of bounds
MarcinS
Re: [aroma.affymetrix] RmaPlm Error in .subset2(groups, 1) : subscript out of bounds
Henrik Bengtsson
[aroma.affymetrix] Re: RmaPlm Error in .subset2(groups, 1) : subscript out of bounds
MarcinS
[aroma.affymetrix] Present/Absent calls with MoGene ST arrays; qc stats too?
Heather Wick
Re: [aroma.affymetrix] Present/Absent calls with MoGene ST arrays; qc stats too?
Henrik Bengtsson
[aroma.affymetrix] Paired total copy-number analysis
tClaus Lindbjerg Andersen
Re: [aroma.affymetrix] Paired total copy-number analysis
Henrik Bengtsson
Re: [aroma.affymetrix] Paired total copy-number analysis
Martina Dori
Re: [aroma.affymetrix] Paired total copy-number analysis
Henrik Bengtsson
Re: [aroma.affymetrix] Paired total copy-number analysis
Martina Dori
[aroma.affymetrix] relaxing memory usage
S. A. Haider
Re: [aroma.affymetrix] relaxing memory usage
Henrik Bengtsson
[aroma.affymetrix] PSCBS help !
Reed
Re: [aroma.affymetrix] PSCBS help !
Henrik Bengtsson
[aroma.affymetrix] Help with SNP6 normalization
joshy
Re: [aroma.affymetrix] Help with SNP6 normalization
Henrik Bengtsson
Re: [aroma.affymetrix] Help with SNP6 normalization
joshy
Re: [aroma.affymetrix] Help with SNP6 normalization
Pierre Neuvial
[aroma.affymetrix] SNP and CNV probe loci
Mike
Re: [aroma.affymetrix] SNP and CNV probe loci
Henrik Bengtsson
Re: [aroma.affymetrix] SNP and CNV probe loci
Mike
Re: [aroma.affymetrix] SNP and CNV probe loci
Mike
Re: [aroma.affymetrix] SNP and CNV probe loci
Henrik Bengtsson
[aroma.affymetrix] No CDF file for chip type found: HuEx-1_0-st-v2"
Maria Rodrigo
Re: [aroma.affymetrix] No CDF file for chip type found: HuEx-1_0-st-v2"
Henrik Bengtsson
[aroma.affymetrix] How to apply TumorBoost to Illumina data?
Unyanee Poolsap
Re: [aroma.affymetrix] How to apply TumorBoost to Illumina data?
Henrik Bengtsson
Re: [aroma.affymetrix] How to apply TumorBoost to Illumina data?
Reed
Re: [aroma.affymetrix] How to apply TumorBoost to Illumina data?
Henrik Bengtsson
Re: [aroma.affymetrix] How to apply TumorBoost to Illumina data?
Reed
Re: [aroma.affymetrix] How to apply TumorBoost to Illumina data?
Henrik Bengtsson
[aroma.affymetrix] Re: How to apply TumorBoost to Illumina data?
Unyanee Poolsap
[aroma.affymetrix] aroma.affymetrix v2.6.0 released
Henrik Bengtsson
[aroma.affymetrix] Installation problems R.methodsS3
Mike
[aroma.affymetrix] Re: Installation problems R.methodsS3
Mike
Re: [aroma.affymetrix] Re: Installation problems R.methodsS3
Henrik Bengtsson
Re: [aroma.affymetrix] Re: Installation problems R.methodsS3
Mike
Re: [aroma.affymetrix] Re: Installation problems R.methodsS3
Mike
Re: [aroma.affymetrix] Re: Installation problems R.methodsS3
Henrik Bengtsson
[aroma.affymetrix] CRMAv2 hangs during "process" function
CanadianJK
Re: [aroma.affymetrix] CRMAv2 hangs during "process" function
Henrik Bengtsson
Re: [aroma.affymetrix] CRMAv2 hangs during "process" function
CanadianJK
[aroma.affymetrix] Invitation to use Google Talk
Google Talk
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