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• • Re: [Genome] [Genecats] can 3D structure be used to evaluate nsSNPs? Brooke Rhead
• [Genome] IAP Brown, Stephen A
  • Re: [Genome] IAP Brooke Rhead
• [Genome] File Formats for A. thaliana (Arabidopsis thaliana) Genome Browser Gateway AKSHAY BHAT
  • Re: [Genome] File Formats for A. thaliana (Arabidopsis thaliana) Genome Browser Gateway Brooke Rhead
• Re: [Genome] Genome Digest, Vol 107, Issue 17 Shumay, Elena
  • Re: [Genome] Genome Digest, Vol 107, Issue 17 Steve Heitner
• [Genome] CpG island track David Shames
  • Re: [Genome] CpG island track Brooke Rhead
• [Genome] a question of finding overlap Zhi Zhang
  • Re: [Genome] a question of finding overlap Brooke Rhead
• [Genome] repbase version info? Janet Young
  • Re: [Genome] repbase version info? Steve Heitner
• [Genome] gorilla genome liftover tools... Woerner, August E - (augustw)
  • Re: [Genome] gorilla genome liftover tools... Hiram Clawson
• [Genome] Errors compiling from source, function ti_bgzf_tell Mahmud Siddiqi
  • Re: [Genome] Errors compiling from source, function ti_bgzf_tell Angie Hinrichs
• [Genome] genelist Eva Wohlleber
  • Re: [Genome] genelist Steve Heitner
• [Genome] How the chromosomes with 2L and 2R are aligned Fahim Mohammad
  • Re: [Genome] How the chromosomes with 2L and 2R are aligned Vanessa Kirkup Swing
  • Re: [Genome] How the chromosomes with 2L and 2R are aligned Fahim Mohammad
  • Re: [Genome] How the chromosomes with 2L and 2R are aligned Pauline Fujita
  • Re: [Genome] How the chromosomes with 2L and 2R are aligned Hiram Clawson
• [Genome] first intron, first coding exon from table browswer output Ann Eileen Miller Baker
  • Re: [Genome] first intron, first coding exon from table browswer output Vanessa Kirkup Swing
• [Genome] Error in the Human Genome: an unidentified base? Parks, Matthew
  • Re: [Genome] Error in the Human Genome: an unidentified base? Vanessa Kirkup Swing
• [Genome] UCSC human multiple alignment (protein) Hong Lu
  • Re: [Genome] UCSC human multiple alignment (protein) Brian Raney
  • Re: [Genome] UCSC human multiple alignment (protein) Hong Lu
• [Genome] feedback on description page: Protein Domain and Structure Information thomas pringle
  • Re: [Genome] feedback on description page: Protein Domain and Structure Information Vanessa Kirkup Swing
• [Genome] upload custom NGS data private MOHAMMED DASHTI
  • Re: [Genome] upload custom NGS data private Vanessa Kirkup Swing
• [Genome] Isoform prediction Mercer C.L.
  • Re: [Genome] Isoform prediction Vanessa Kirkup Swing
• [Genome] Question&Help Campos Fernandes Xavier Ana Belinda
  • Re: [Genome] Question&Help Steve Heitner
• [Genome] Onsite training Turner, Stephen (sdt5z)
  • Re: [Genome] Onsite training robert kuhn
• [Genome] all mRNA data and protein Carsten Raabe
  • Re: [Genome] all mRNA data and protein Greg Roe
• [Genome] FW: LncRNAs hosting miRNAs Regalla.Kumarswamy
  • Re: [Genome] FW: LncRNAs hosting miRNAs Greg Roe
  • [Genome] FW: LncRNAs hosting miRNAs Regalla.Kumarswamy
• [Genome] Local mirroring issues with compiled cgi-bin Devasta Palle
  • Re: [Genome] Local mirroring issues with compiled cgi-bin Greg Roe
• Re: [Genome] [Genome-mirror] Errors compiling from source, function ti_bgzf_tell Angie Hinrichs
• [Genome] blat issues thomas pringle
  • Re: [Genome] blat issues Brooke Rhead
• [Genome] tree utility issues thomas pringle
  • Re: [Genome] tree utility issues Brooke Rhead
  • Re: [Genome] tree utility issues II thomas pringle
  • Re: [Genome] tree utility issues IIb thomas pringle
  • Re: [Genome] tree utility issues IIb Greg Roe
• [Genome] LncRNAs hosting miRNAs Regalla.Kumarswamy
  • Re: [Genome] LncRNAs hosting miRNAs Brooke Rhead
• [Genome] Y chromosome coordinates Qasim Ayub
  • Re: [Genome] Y chromosome coordinates Hiram Clawson
  • Re: [Genome] Y chromosome coordinates Qasim Ayub
• Re: [Genome] Fwd: identifying "first intron", "first coding exon" Ann Eileen Miller Baker
  • Re: [Genome] Fwd: identifying "first intron", "first coding exon" Brooke Rhead
  • Re: [Genome] Fwd: identifying "first intron", "first coding exon" Ann Eileen Miller Baker
  • Re: [Genome] Fwd: identifying "first intron", "first coding exon" Greg Roe
• [Genome] Getting different results for the same query sequence while running BLAT Brahmachary, Manisha
  • Re: [Genome] Getting different results for the same query sequence while running BLAT Galt Barber
• [Genome] Saccharomyces species tree with branch lengths Abigail Reyes
  • Re: [Genome] Saccharomyces species tree with branch lengths Brooke Rhead
• [Genome] zipping format for Mouse ENCODE fastq.gz files from Caltech lab? Albert Vilella
  • Re: [Genome] zipping format for Mouse ENCODE fastq.gz files from Caltech lab? Jim Kent
• [Genome] BAM debugging William Noble
  • Re: [Genome] BAM debugging Sean Davis
  • Re: [Genome] BAM debugging robert kuhn
• [Genome] What does DQ mean before the number assigned to a gene number? Mercer C.L.
  • Re: [Genome] What does DQ mean before the number assigned to a gene number? Brooke Rhead
• [Genome] fasta files for gorGor3 and nomLeu1 Janet Young
  • Re: [Genome] fasta files for gorGor3 and nomLeu1 Steve Heitner
• [Genome] a question about retrieving coordinates of targetscan target sites chunjiang he
  • Re: [Genome] a question about retrieving coordinates of targetscan target sites Steve Heitner
• [Genome] missing "range/values" buttons in some tables in Table Browser ? Assaf Gordon
  • Re: [Genome] missing "range/values" buttons in some tables in Table Browser ? Steve Heitner
• [Genome] hgWiggle compilation error Mohamed Radhouane Aniba
  • Re: [Genome] hgWiggle compilation error Hiram Clawson
• [Genome] Denisova SNP allele and sequence retreival Juliana Morales
  • Re: [Genome] Denisova SNP allele and sequence retreival Greg Roe
• [Genome] Conversion of GTF tracks to BED12. Chirag Nepal
  • Re: [Genome] Conversion of GTF tracks to BED12. Pauline Fujita
• [Genome] bug? Yuan Jian
  • Re: [Genome] bug? Brooke Rhead
  • Re: [Genome] bug? Yuan Jian
  • Re: [Genome] bug? Greg Roe
• [Genome] Requesting BosTau6 5-way multiz alignment files Bickhart, Derek
  • Re: [Genome] Requesting BosTau6 5-way multiz alignment files Brooke Rhead
• [Genome] Genome browser scale F. Ali
  • Re: [Genome] Genome browser scale Brooke Rhead
• [Genome] filtering rRNA out of GTF files Clayton K Collings
  • Re: [Genome] filtering rRNA out of GTF files Vanessa Kirkup Swing
• [Genome] vcf format for adding custom track Yi Mao
  • Re: [Genome] vcf format for adding custom track Brooke Rhead
  • Re: [Genome] vcf format for adding custom track Brooke Rhead
• [Genome] lavToPsl file ashu seq
  • Re: [Genome] lavToPsl file Pauline Fujita
• [Genome] Small RNA-seq from ENCODE/Cold Spring Harbor Lab Carsten Raabe
  • Re: [Genome] Small RNA-seq from ENCODE/Cold Spring Harbor Lab Pauline Fujita
  • Re: [Genome] Small RNA-seq from ENCODE/Cold Spring Harbor Lab Carsten Raabe
  • Re: [Genome] Small RNA-seq from ENCODE/Cold Spring Harbor Lab Brooke Rhead
  • Re: [Genome] Small RNA-seq from ENCODE/Cold Spring Harbor Lab Carsten Raabe
• [Genome] dbSNP135 on UCSC Gowrisankar, Sivakumar,Ph.D.
  • Re: [Genome] dbSNP135 on UCSC Pauline Fujita
• [Genome] Error Uploading a Custom Track - Too Large? Graham Erwin
  • Re: [Genome] Error Uploading a Custom Track - Too Large? Hiram Clawson
• [Genome] Errors in basewise primate conservation scores (phyloP) of 43 vertebrate genomes with Human (hg18) Richard Burhans
  • Re: [Genome] Errors in basewise primate conservation scores (phyloP) of 43 vertebrate genomes with Human (hg18) Pauline Fujita
• [Genome] The direct URL to access a genome region for a stored session Wu, Gang
  • Re: [Genome] The direct URL to access a genome region for a stored session Pauline Fujita
• [Genome] custom track submission Sam, Judy
  • Re: [Genome] custom track submission Ann Zweig
• [Genome] CpG Island track for platypus Hannah Long
  • Re: [Genome] CpG Island track for platypus Vanessa Kirkup Swing
  • Re: [Genome] CpG Island track for platypus Greg Roe
• Re: [Genome] UCSC browser session Amino_Acid_download Katrina Learned
• [Genome] the supercontigs information of gorilla and the usage of axtToMaf MING Chen,evolgen
  • Re: [Genome] the supercontigs information of gorilla and the usage of axtToMaf Steve Heitner
  • Re: [Genome] the supercontigs information of gorilla and the usage of axtToMaf Angie Hinrichs
• [Genome] Releasing two new assemblies Steve Heitner
• [Genome] A question about the pairwise alignments between human and kangaroo rat guzhili
  • Re: [Genome] A question about the pairwise alignments between human and kangaroo rat Vanessa Kirkup Swing
  • Re: [Genome] A question about the pairwise alignments between human and kangaroo rat Hiram Clawson
• [Genome] denisova genome matko
  • Re: [Genome] denisova genome Vanessa Kirkup Swing
• [Genome] liftover chain file from hg18 to hg19 Liu, Pengyuan
  • Re: [Genome] liftover chain file from hg18 to hg19 Vanessa Kirkup Swing
• [Genome] Aedes aegypti Developmental Transcriptome Tracks Rob Good
  • Re: [Genome] Aedes aegypti Developmental Transcriptome Tracks Vanessa Kirkup Swing
  • Re: [Genome] Aedes aegypti Developmental Transcriptome Tracks Vanessa Kirkup Swing
• [Genome] gene IDs conversion between species mali salmon
  • Re: [Genome] gene IDs conversion between species Steve Heitner
  • Re: [Genome] gene IDs conversion between species mali salmon
  • Re: [Genome] gene IDs conversion between species Pauline Fujita
• [Genome] Gene track file Lili Li
  • Re: [Genome] Gene track file Greg Roe
  • Re: [Genome] Gene track file Lili Li
  • Re: [Genome] Gene track file Vanessa Kirkup Swing
• [Genome] Need help with Information Firoz Anwar
  • Re: [Genome] Need help with Information Steve Heitner
• [Genome] Retrieving sequences for a list go regions Zohar Itzhaki
  • Re: [Genome] Retrieving sequences for a list go regions Brooke Rhead
• [Genome] converting from hg18 to hg19 Mike Miller
  • Re: [Genome] converting from hg18 to hg19 Brooke Rhead
  • Re: [Genome] converting from hg18 to hg19 Mike Miller
  • Re: [Genome] converting from hg18 to hg19 Vanessa Kirkup Swing
• [Genome] bigwig display problem Darshan Singh
  • Re: [Genome] bigwig display problem Brooke Rhead
• [Genome] NEFL annotation problem on hg19 Jim Robinson
  • Re: [Genome] NEFL annotation problem on hg19 Brooke Rhead
• [Genome] Oline tool for conserved motifs in different species Wolf, Annette
  • Re: [Genome] Oline tool for conserved motifs in different species Brooke Rhead
• Re: [Genome] POISTION TO GENE NAME Vasta, Valeria
  • Re: [Genome] POISTION TO GENE NAME Hiram Clawson
  • Re: [Genome] POISTION TO GENE NAME Luvina Guruvadoo
• [Genome] question about linking to the genome browser Rami
  • Re: [Genome] question about linking to the genome browser Luvina Guruvadoo
• [Genome] promoter region Nikita Pednekar
  • Re: [Genome] promoter region Luvina Guruvadoo
  • Re: [Genome] promoter region Brooke Rhead
• [Genome] Issue with UCSC sessions and internet browsers? Ian Donaldson
  • Re: [Genome] Issue with UCSC sessions and internet browsers? Luvina Guruvadoo
• [Genome] liftOver support for Gorilla_gorilla.gorGor3.63 assembly DanielWTang
  • Re: [Genome] liftOver support for Gorilla_gorilla.gorGor3.63 assembly Steve Heitner
  • Re: [Genome] liftOver support for Gorilla_gorilla.gorGor3.63 assembly Steve Heitner
• [Genome] max of seqCount in 2bit Vince Forgetta
  • Re: [Genome] max of seqCount in 2bit Luvina Guruvadoo
  • Re: [Genome] max of seqCount in 2bit Vince Forgetta
• [Genome] List of genes between 2 coordinates varun gupta
  • Re: [Genome] List of genes between 2 coordinates Steve Heitner
• [Genome] about "txStart"?? 柳城
  • Re: [Genome] about "txStart"?? Ivan Adzhubey
• [Genome] genetic distance Ya Hu
  • Re: [Genome] genetic distance Luvina Guruvadoo
• [Genome] consultation about the mRNA sequence of uc001aoe.1 Phenix Hydra
  • Re: [Genome] consultation about the mRNA sequence of uc001aoe.1 Brooke Rhead
  • [Genome] Fwd: consultation about the mRNA sequence of uc001aoe.1 Phenix Hydra
  • Re: [Genome] Fwd: consultation about the mRNA sequence of uc001aoe.1 Brooke Rhead
• [Genome] genePredToGtf problem Filip Pattyn
  • Re: [Genome] genePredToGtf problem Luvina Guruvadoo
  • Re: [Genome] genePredToGtf problem Galt Barber
  • Re: [Genome] genePredToGtf problem Hiram Clawson
• [Genome] liftOver -multiple BED4/5/6 Peter Ebert
  • Re: [Genome] liftOver -multiple BED4/5/6 Luvina Guruvadoo
  • Re: [Genome] liftOver -multiple BED4/5/6 Peter Ebert
  • Re: [Genome] liftOver -multiple BED4/5/6 Hiram Clawson
• [Genome] Custom track (bigWig): display issue ROBERT Christelle
  • Re: [Genome] Custom track (bigWig): display issue ROBERT Christelle
  • Re: [Genome] Custom track (bigWig): display issue Galt Barber
  • Re: [Genome] Custom track (bigWig): display issue Hiram Clawson
• [Genome] question of strand issue of table of RefSeq Genes. Ma, Yiyi
  • Re: [Genome] question of strand issue of table of RefSeq Genes. Brooke Rhead
  • Re: [Genome] question of strand issue of table of RefSeq Genes. Brooke Rhead
• Re: [Genome] gff3 to UCSC gene table? Jacob Biesinger

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